RNA–Protein interactions for RNA: ENST00000384314.1

RNU6-3P-201, Transcript of RNA, U6 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU6-3P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-3P-201ENST00000384314 PLD4Q96BZ4 506 aa4.84□□□□□ -1.63
RNU6-3P-201ENST00000384314 PBX4Q9BYU1 374 aa4.84□□□□□ -1.63
RNU6-3P-201ENST00000384314 MUC3BQ9H195 1237 aa4.84□□□□□ -1.63
RNU6-3P-201ENST00000384314 RRAGCQ9HB90 399 aa4.84□□□□□ -1.63
RNU6-3P-201ENST00000384314 NLRP2Q9NX02 1062 aa4.84□□□□□ -1.63
RNU6-3P-201ENST00000384314 KANSL3Q9P2N6 904 aa4.84□□□□□ -1.63
RNU6-3P-201ENST00000384314 STARD13Q9Y3M8 1113 aa4.84□□□□□ -1.63
RNU6-3P-201ENST00000384314 PNMA6FA0A0J9YX94 578 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 SPDYE3A6NKU9 549 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 M0R082 166 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 P4HBP07237 508 aaKnown RBP4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 COL13A1Q5TAT6 717 aaPredicted RBP4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 KIAA0319Q5VV43 1072 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 NPAS4Q8IUM7 802 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 ZNF417Q8TAU3 575 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 SCARF2Q96GP6 870 aaPredicted RBP4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 ZNF587Q96SQ5 575 aaPredicted RBP4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 LPIN3Q9BQK8 851 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 SMG9Q9H0W8 520 aaKnown RBP4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 JPH1Q9HDC5 661 aaPredicted RBP4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 DZANK1Q9NVP4 752 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 NAGPAQ9UK23 515 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 MKL2Q9ULH7 1088 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 TRAK1Q9UPV9 953 aa4.83□□□□□ -1.64
RNU6-3P-201ENST00000384314 GNB5O14775 395 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 EIF4EBP3O60516 100 aaPredicted RBP4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 PRPF40AO75400 957 aaKnown RBP4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 ALBP02768 609 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 LDHBP07195 334 aaKnown RBP4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 PTPRAP18433 802 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 DGKGP49619 791 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 ZNF326Q5BKZ1 582 aaKnown RBP4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 TMEM102Q8N9M5 508 aaPredicted RBP4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 DCAF11Q8TEB1 546 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 OSMRQ99650 979 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 SRCIN1Q9C0H9 1055 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 ZFYVE1Q9HBF4 777 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 PODXL2Q9NZ53 605 aa4.82□□□□□ -1.64
RNU6-3P-201ENST00000384314 A0A1W2PP55 124 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 PDE2AO00408 941 aaPredicted RBP4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 POLR3DP05423 398 aaPredicted RBP4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 AFF1P51825 1210 aaKnown RBP4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 USPL1Q5W0Q7 1092 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 CEP135Q66GS9 1140 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 NUDT8Q8WV74 236 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 NXPE3Q969Y0 559 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 BHLHE41Q9C0J9 482 aaPredicted RBP4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 EHD4Q9H223 541 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 RASSF4Q9H2L5 321 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 SUV39H2Q9H5I1 410 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 SRA1Q9HD15 236 aaKnown RBP4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 NPHS2Q9NP85 383 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 NOP53Q9NZM5 478 aaKnown RBP4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 SPG7Q9UQ90 795 aa4.81□□□□□ -1.64
RNU6-3P-201ENST00000384314 NFKBIEO00221 500 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 GADD45BO75293 160 aaPredicted RBP4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 XRCC5P13010 732 aaKnown RBP4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 HOXB4P17483 251 aaPredicted RBP4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 CDC27P30260 824 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 CABP4P57796 275 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 PEAR1Q5VY43 1037 aaPredicted RBP4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 MSL1Q68DK7 614 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 PRPF40BQ6NWY9 871 aaKnown RBP4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 LINC00114Q6XXX2 140 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 FBXO33Q7Z6M2 555 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 ALYREFQ86V81 257 aaKnown RBP4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 WFDC8Q8IUA0 241 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 CCNJLQ8IV13 435 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 MAP4K3Q8IVH8 894 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 DTWD1Q8N5C7 304 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 DCAF5Q96JK2 942 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 ZKSCAN3Q9BRR0 538 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 BCL2L13Q9BXK5 485 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 ADAM19Q9H013 955 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 LIN7BQ9HAP6 207 aa4.8□□□□□ -1.64
RNU6-3P-201ENST00000384314 NID1P14543 1247 aa4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 ATP11AP98196 1134 aa4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 XPCQ01831 940 aaPredicted RBP4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 PTPN12Q05209 780 aaKnown RBP4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 GRIK5Q16478 980 aa4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 GDF6Q6KF10 455 aaPredicted RBP4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 FAM117BQ6P1L5 589 aa4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 IL22RA1Q8N6P7 574 aa4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 EPS8L3Q8TE67 593 aaKnown RBP4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 BSNDQ8WZ55 320 aa4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 POP1Q99575 1024 aaKnown RBP4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 PPME1Q9Y570 386 aa4.79□□□□□ -1.64
RNU6-3P-201ENST00000384314 GNA15P30679 374 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 RAC1P63000 192 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 SNRPNP63162 240 aaKnown RBP4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 COL9A3Q14050 684 aaPredicted RBP4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 PRRT3Q5FWE3 981 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 WNT8BQ93098 351 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 TCF12Q99081 682 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 BCO2Q9BYV7 579 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 LATS2Q9NRM7 1088 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 WWC3Q9ULE0 1092 aa4.78□□□□□ -1.64
RNU6-3P-201ENST00000384314 TRIM33Q9UPN9 1127 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 338.3 ms