RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 NEK1Q96PY6 1258 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 MARCKSP29966 332 aaPredicted RBP6.62□□□□□ -1.35
RFX3-204ENST00000382004 GBP1P32455 592 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 KRT9P35527 623 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 NFE2L2Q16236 605 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 ZNF569Q5MCW4 686 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 LZTFL1Q9NQ48 299 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 KRT86O43790 486 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 LDHCP07864 332 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 UBXN1Q04323 297 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 ZSCAN23Q3MJ62 389 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 EVI5LQ96CN4 794 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 CLEC11AQ9Y240 323 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 RTEL1-TNFRSF6BF6WH68 1400 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 BUB1BO60566 1050 aaPredicted RBP6.62□□□□□ -1.35
RFX3-204ENST00000382004 IGSF3O75054 1194 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 KRT83P78385 493 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 LMNTD2Q8IXW0 634 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 FAM76AQ8TAV0 307 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 ALG1Q9BT22 464 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 MCM5P33992 734 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 CCDC122Q5T0U0 273 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 NECAB1Q8N987 351 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 DHX58Q96C10 678 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 CCDC42Q96M95 316 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 CRNKL1Q9BZJ0 848 aaKnown RBP6.62□□□□□ -1.35
RFX3-204ENST00000382004 FAM204AQ9H8W3 233 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 SP4Q02446 784 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 ITIH3Q06033 890 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 MAP7Q14244 749 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 LRRC2Q9BYS8 371 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 MGEA5O60502 916 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 ADAMTS2O95450 1211 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 TMPOP42166 694 aaKnown RBP6.62□□□□□ -1.35
RFX3-204ENST00000382004 VAV2P52735 878 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 IFT74Q96LB3 600 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 PPME1Q9Y570 386 aa6.62□□□□□ -1.35
RFX3-204ENST00000382004 CALCOCO2Q13137 446 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 UVSSAQ2YD98 709 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 SH2D4BQ5SQS7 431 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 SEL1L2Q5TEA6 688 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 CCDC186Q7Z3E2 898 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 GSDMBQ8TAX9 411 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 C6orf50Q9HD87 102 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 MTUS1Q9ULD2 1270 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 KLF18A0A0U1RQI7 1052 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 WDR46O15213 610 aaKnown RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 NAPAP54920 295 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 SF3A3Q12874 501 aaKnown RBP eCLIP6.61□□□□□ -1.35
RFX3-204ENST00000382004 RAPGEF1Q13905 1077 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 DCAF17Q5H9S7 520 aaPredicted RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 SMARCC2Q8TAQ2 1214 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 STAC3Q96MF2 364 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 NOLC1Q14978 699 aaKnown RBP eCLIP6.61□□□□□ -1.35
RFX3-204ENST00000382004 SKAP1Q86WV1 359 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 ZBTB3Q9H5J0 574 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 DAPK3O43293 454 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 CLNS1AP54105 237 aaKnown RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 TSHZ3Q63HK5 1081 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 LDHAL6AQ6ZMR3 332 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 LEO1Q8WVC0 666 aaPredicted RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 RAB3IPQ96QF0 476 aaPredicted RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 TRIM6Q9C030 488 aaPredicted RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 ZNF644Q9H582 1327 aaPredicted RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 RFX1P22670 979 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 PICALMQ13492 652 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 CDC5LQ99459 802 aaKnown RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 HARSP12081 509 aaKnown RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 HMGB2P26583 209 aaKnown RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 STX17P56962 302 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 RTN1Q16799 776 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 ZBTB43O43298 467 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 LMOD1P29536 600 aaPredicted RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 JARID2Q92833 1246 aaPredicted RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 TBC1D2Q9BYX2 928 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 ZSCAN16Q9H4T2 348 aaPredicted RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 CNPY2Q9Y2B0 182 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 ATP5DP30049 168 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 RNASE9P60153 205 aaKnown RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 KRBA2Q6ZNG9 492 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 GPR161Q8N6U8 529 aaKnown RBP6.61□□□□□ -1.35
RFX3-204ENST00000382004 MCUR1Q96AQ8 359 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 RABEP2Q9H5N1 569 aa6.61□□□□□ -1.35
RFX3-204ENST00000382004 STMN1P16949 149 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 PLIN2Q99541 437 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 TNNC1P63316 161 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 AFAP1L2Q8N4X5 818 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 ARFGAP2Q8N6H7 521 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 BANK1Q8NDB2 785 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 A0A1B0GUA9 196 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 BICDL2A1A5D9 508 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 SETSIPP0DME0 302 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 DNAJC25Q9H1X3 360 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 MYOM3Q5VTT5 1437 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 RIOK3O14730 519 aaKnown RBP6.6□□□□□ -1.35
RFX3-204ENST00000382004 CCDC62Q6P9F0 684 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 GTF3C6Q969F1 213 aa6.6□□□□□ -1.35
RFX3-204ENST00000382004 MAP3K2Q9Y2U5 619 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms