RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NBPF7P0C2Y1 421 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-202ENST00000380747 HSPA8P11142 646 aaKnown RBP11.63□□□□□ -0.55
HMGN1-202ENST00000380747 EPHX2P34913 555 aa11.63□□□□□ -0.55
HMGN1-202ENST00000380747 TIE1P35590 1138 aa11.63□□□□□ -0.55
HMGN1-202ENST00000380747 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
HMGN1-202ENST00000380747 LBX1P52954 281 aa11.63□□□□□ -0.55
HMGN1-202ENST00000380747 GPSM2P81274 684 aa11.63□□□□□ -0.55
HMGN1-202ENST00000380747 FOXO4P98177 505 aa11.63□□□□□ -0.55
HMGN1-202ENST00000380747 NSFL1CQ9UNZ2 370 aaKnown RBP11.63□□□□□ -0.55
HMGN1-202ENST00000380747 ZNF541Q9H0D2 1346 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 FZD9O00144 591 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 PPIP5K2O43314 1243 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 CSF1RP07333 972 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 ITGA6P23229 1130 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
HMGN1-202ENST00000380747 DEFB115Q30KQ5 88 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 LMBR1LQ6UX01 489 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 JDP2Q8WYK2 163 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 ARHGAP45Q92619 1136 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 ABHD8Q96I13 439 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 SUCLG2Q96I99 432 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
HMGN1-202ENST00000380747 RTL9Q8NET4 1388 aa11.62□□□□□ -0.55
HMGN1-202ENST00000380747 TAF1P21675 1872 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 TTLL13PA6NNM8 815 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
HMGN1-202ENST00000380747 AOC3Q16853 763 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 EAPPQ56P03 285 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-202ENST00000380747 ATF7IPQ6VMQ6 1270 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 NIM1KQ8IY84 436 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 CNTROBQ8N137 903 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 GPC2Q8N158 579 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 RTFDC1Q9BY42 306 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-202ENST00000380747 ANKIB1Q9P2G1 1089 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 TNNQ9UQP3 1299 aa11.61□□□□□ -0.55
HMGN1-202ENST00000380747 UTYO14607 1347 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
HMGN1-202ENST00000380747 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 RIMBP2O15034 1052 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 TRIM27P14373 513 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 RGS19P49795 217 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 MKRN3Q13064 507 aaKnown RBP11.6□□□□□ -0.55
HMGN1-202ENST00000380747 CCDC57Q2TAC2 916 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 TAF7LQ5H9L4 462 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 ZKSCAN2Q63HK3 967 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 MS4A4AQ96JQ5 239 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 MPHOSPH8Q99549 860 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 USP44Q9H0E7 712 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-202ENST00000380747 BSDC1Q9NW68 430 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-202ENST00000380747 GGA1Q9UJY5 639 aa11.6□□□□□ -0.55
HMGN1-202ENST00000380747 UFL1O94874 794 aa11.59□□□□□ -0.55
HMGN1-202ENST00000380747 UBTFL1P0CB47 393 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-202ENST00000380747 EIF6P56537 245 aaKnown RBP11.59□□□□□ -0.55
HMGN1-202ENST00000380747 TBC1D16Q8TBP0 767 aa11.59□□□□□ -0.55
HMGN1-202ENST00000380747 KAZALD1Q96I82 304 aa11.59□□□□□ -0.55
HMGN1-202ENST00000380747 GPR101Q96P66 508 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-202ENST00000380747 EYA3Q99504 573 aa11.59□□□□□ -0.55
HMGN1-202ENST00000380747 VPS33BQ9H267 617 aa11.59□□□□□ -0.55
HMGN1-202ENST00000380747 POLLQ9UGP5 575 aa11.59□□□□□ -0.55
HMGN1-202ENST00000380747 XDHP47989 1333 aa11.59□□□□□ -0.55
HMGN1-202ENST00000380747 LRRC37AA6NMS7 1700 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 ECE1P42892 770 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 KIAA2012Q0VF49 1180 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 WASHC4Q2M389 1173 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-202ENST00000380747 INTS3Q68E01 1043 aaKnown RBP11.58□□□□□ -0.56
HMGN1-202ENST00000380747 ZNF594Q96JF6 807 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-202ENST00000380747 BICC1Q9H694 974 aaKnown RBP11.58□□□□□ -0.56
HMGN1-202ENST00000380747 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 MINPP1Q9UNW1 487 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 COL4A5P29400 1685 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
HMGN1-202ENST00000380747 MYH3P11055 1940 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 G3V3G9 751 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 ATP2B4P23634 1241 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
HMGN1-202ENST00000380747 ANKRD44Q8N8A2 993 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 SP7Q8TDD2 431 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-202ENST00000380747 MEIS3Q99687 375 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 ZC3H12CQ9C0D7 883 aaKnown RBP11.57□□□□□ -0.56
HMGN1-202ENST00000380747 ANKRD2Q9GZV1 360 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 CNNM1Q9NRU3 951 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 RCAN3Q9UKA8 241 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 ABT1Q9ULW3 272 aaKnown RBP11.57□□□□□ -0.56
HMGN1-202ENST00000380747 HDAC5Q9UQL6 1122 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 GJA3Q9Y6H8 435 aa11.57□□□□□ -0.56
HMGN1-202ENST00000380747 TNRC18O15417 2968 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-202ENST00000380747 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-202ENST00000380747 CHRNDQ07001 517 aa11.56□□□□□ -0.56
HMGN1-202ENST00000380747 NBR1Q14596 966 aa11.56□□□□□ -0.56
HMGN1-202ENST00000380747 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
HMGN1-202ENST00000380747 RABL6Q3YEC7 729 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-202ENST00000380747 LDHAL6AQ6ZMR3 332 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms