RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 ESR2Q92731 530 aa20.58■□□□□ 0.89
UBL3-201ENST00000380680 RBSNQ9H1K0 784 aa20.58■□□□□ 0.89
UBL3-201ENST00000380680 CNNM2Q9H8M5 875 aa20.58■□□□□ 0.89
UBL3-201ENST00000380680 NCOA5Q9HCD5 579 aaKnown RBP20.58■□□□□ 0.89
UBL3-201ENST00000380680 BRD1O95696 1058 aa20.58■□□□□ 0.89
UBL3-201ENST00000380680 CHAMP1Q96JM3 812 aa20.58■□□□□ 0.89
UBL3-201ENST00000380680 ZHX3Q9H4I2 956 aa20.58■□□□□ 0.89
UBL3-201ENST00000380680 CLCN1P35523 988 aa20.58■□□□□ 0.88
UBL3-201ENST00000380680 GPS2Q13227 327 aa20.58■□□□□ 0.88
UBL3-201ENST00000380680 PDE4BQ07343 736 aa20.57■□□□□ 0.88
UBL3-201ENST00000380680 MRPS27Q92552 414 aaKnown RBP20.57■□□□□ 0.88
UBL3-201ENST00000380680 DNAJC25Q9H1X3 360 aa20.57■□□□□ 0.88
UBL3-201ENST00000380680 RTN1Q16799 776 aa20.57■□□□□ 0.88
UBL3-201ENST00000380680 RASEFQ8IZ41 740 aa20.57■□□□□ 0.88
UBL3-201ENST00000380680 KCNG4Q8TDN1 519 aa20.57■□□□□ 0.88
UBL3-201ENST00000380680 SEC62Q99442 399 aaKnown RBP20.57■□□□□ 0.88
UBL3-201ENST00000380680 TM6SF1Q9BZW5 370 aa20.57■□□□□ 0.88
UBL3-201ENST00000380680 CAVIN2O95810 425 aa20.57■□□□□ 0.88
UBL3-201ENST00000380680 SYKP43405 635 aa20.56■□□□□ 0.88
UBL3-201ENST00000380680 CCDC102BQ68D86 513 aa20.56■□□□□ 0.88
UBL3-201ENST00000380680 APPBP2Q92624 585 aa20.56■□□□□ 0.88
UBL3-201ENST00000380680 CRNKL1Q9BZJ0 848 aaKnown RBP20.56■□□□□ 0.88
UBL3-201ENST00000380680 STX8Q9UNK0 236 aa20.56■□□□□ 0.88
UBL3-201ENST00000380680 LDHCP07864 332 aa20.56■□□□□ 0.88
UBL3-201ENST00000380680 TMTC2Q8N394 836 aa20.56■□□□□ 0.88
UBL3-201ENST00000380680 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
UBL3-201ENST00000380680 PDE8AO60658 829 aa20.56■□□□□ 0.88
UBL3-201ENST00000380680 TYRO3Q06418 890 aa20.56■□□□□ 0.88
UBL3-201ENST00000380680 CCDC194A0A1B0GVG4 234 aa20.55■□□□□ 0.88
UBL3-201ENST00000380680 GADD45BO75293 160 aaPredicted RBP20.55■□□□□ 0.88
UBL3-201ENST00000380680 BAG3O95817 575 aa20.55■□□□□ 0.88
UBL3-201ENST00000380680 SEC63Q9UGP8 760 aaKnown RBP20.55■□□□□ 0.88
UBL3-201ENST00000380680 AXIN2Q9Y2T1 843 aa20.55■□□□□ 0.88
UBL3-201ENST00000380680 GPAA1O43292 621 aa20.55■□□□□ 0.88
UBL3-201ENST00000380680 TTC12Q9H892 705 aaPredicted RBP20.55■□□□□ 0.88
UBL3-201ENST00000380680 MBD4O95243 580 aa20.55■□□□□ 0.88
UBL3-201ENST00000380680 ME3Q16798 604 aa20.55■□□□□ 0.88
UBL3-201ENST00000380680 COPRSQ9NQ92 184 aa20.55■□□□□ 0.88
UBL3-201ENST00000380680 TLR7Q9NYK1 1049 aaKnown RBP20.55■□□□□ 0.88
UBL3-201ENST00000380680 ZAP70P43403 619 aa20.55■□□□□ 0.88
UBL3-201ENST00000380680 C16orf45Q96MC5 204 aaPredicted RBP20.55■□□□□ 0.88
UBL3-201ENST00000380680 TRMT1Q9NXH9 659 aaKnown RBP20.55■□□□□ 0.88
UBL3-201ENST00000380680 PPP1R1BQ9UD71 204 aaPredicted RBP20.55■□□□□ 0.88
UBL3-201ENST00000380680 SSH2Q76I76 1423 aa20.54■□□□□ 0.88
UBL3-201ENST00000380680 IQGAP1P46940 1657 aa20.54■□□□□ 0.88
UBL3-201ENST00000380680 PTPN14Q15678 1187 aa20.54■□□□□ 0.88
UBL3-201ENST00000380680 SPTLC2O15270 562 aa20.54■□□□□ 0.88
UBL3-201ENST00000380680 SPTY2D1Q68D10 685 aaPredicted RBP20.54■□□□□ 0.88
UBL3-201ENST00000380680 TAF5LO75529 589 aa20.54■□□□□ 0.88
UBL3-201ENST00000380680 TPTE2Q6XPS3 522 aa20.54■□□□□ 0.88
UBL3-201ENST00000380680 ZNF771Q7L3S4 317 aaPredicted RBP20.54■□□□□ 0.88
UBL3-201ENST00000380680 ZNHIT6Q9NWK9 470 aaKnown RBP20.54■□□□□ 0.88
UBL3-201ENST00000380680 ANKARQ7Z5J8 1434 aa20.54■□□□□ 0.88
UBL3-201ENST00000380680 IFIT1BQ5T764 474 aaKnown RBP20.53■□□□□ 0.88
UBL3-201ENST00000380680 JAK2O60674 1132 aa20.53■□□□□ 0.88
UBL3-201ENST00000380680 LRRC24Q50LG9 513 aa20.53■□□□□ 0.88
UBL3-201ENST00000380680 KAT14Q9H8E8 782 aa20.53■□□□□ 0.88
UBL3-201ENST00000380680 TMEM63CQ9P1W3 806 aa20.53■□□□□ 0.88
UBL3-201ENST00000380680 B4E1Z4 1266 aa20.53■□□□□ 0.88
UBL3-201ENST00000380680 KIF5BP33176 963 aa20.53■□□□□ 0.88
UBL3-201ENST00000380680 DBNLQ9UJU6 430 aaKnown RBP20.53■□□□□ 0.88
UBL3-201ENST00000380680 TOP1P11387 765 aaKnown RBP20.53■□□□□ 0.88
UBL3-201ENST00000380680 VAT1LQ9HCJ6 419 aa20.53■□□□□ 0.88
UBL3-201ENST00000380680 MAGEB6P1A0A0J9YX57 407 aa20.52■□□□□ 0.88
UBL3-201ENST00000380680 PUM3Q15397 648 aaKnown RBP20.52■□□□□ 0.88
UBL3-201ENST00000380680 CRACR2BQ8N4Y2 399 aaPredicted RBP20.52■□□□□ 0.88
UBL3-201ENST00000380680 ZKSCAN3Q9BRR0 538 aa20.52■□□□□ 0.88
UBL3-201ENST00000380680 ZKSCAN5Q9Y2L8 839 aa20.52■□□□□ 0.88
UBL3-201ENST00000380680 JAG2Q9Y219 1238 aa20.52■□□□□ 0.88
UBL3-201ENST00000380680 LMTK3Q96Q04 1460 aa20.52■□□□□ 0.88
UBL3-201ENST00000380680 NRXN1Q9ULB1 1477 aa20.52■□□□□ 0.88
UBL3-201ENST00000380680 CCDC186Q7Z3E2 898 aa20.52■□□□□ 0.87
UBL3-201ENST00000380680 LSG1Q9H089 658 aaKnown RBP20.52■□□□□ 0.87
UBL3-201ENST00000380680 ZNF219Q9P2Y4 722 aaPredicted RBP20.52■□□□□ 0.87
UBL3-201ENST00000380680 ZNF445P59923 1031 aa20.51■□□□□ 0.87
UBL3-201ENST00000380680 ADCK5Q3MIX3 580 aa20.51■□□□□ 0.87
UBL3-201ENST00000380680 TMC6Q7Z403 805 aa20.51■□□□□ 0.87
UBL3-201ENST00000380680 ASAP1Q9ULH1 1129 aa20.51■□□□□ 0.87
UBL3-201ENST00000380680 ERBB4Q15303 1308 aa20.51■□□□□ 0.87
UBL3-201ENST00000380680 CDC37L1Q7L3B6 337 aa20.51■□□□□ 0.87
UBL3-201ENST00000380680 ADGRB1O14514 1584 aa20.51■□□□□ 0.87
UBL3-201ENST00000380680 GNAT2P19087 354 aa20.5■□□□□ 0.87
UBL3-201ENST00000380680 BMP2KQ9NSY1 1161 aaPredicted RBP20.5■□□□□ 0.87
UBL3-201ENST00000380680 PARP10Q53GL7 1025 aa20.5■□□□□ 0.87
UBL3-201ENST00000380680 OTUD7BQ6GQQ9 843 aa20.5■□□□□ 0.87
UBL3-201ENST00000380680 TANGO6Q9C0B7 1094 aa20.5■□□□□ 0.87
UBL3-201ENST00000380680 RTCBQ9Y3I0 505 aaKnown RBP20.5■□□□□ 0.87
UBL3-201ENST00000380680 TNNT1P13805 278 aa20.5■□□□□ 0.87
UBL3-201ENST00000380680 ZSWIM6Q9HCJ5 1215 aa20.5■□□□□ 0.87
UBL3-201ENST00000380680 SLF2Q8IX21 1173 aa20.49■□□□□ 0.87
UBL3-201ENST00000380680 CAGE1Q8TC20 777 aa20.49■□□□□ 0.87
UBL3-201ENST00000380680 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
UBL3-201ENST00000380680 KIAA1210Q9ULL0 1709 aa20.49■□□□□ 0.87
UBL3-201ENST00000380680 POLA2Q14181 598 aa20.49■□□□□ 0.87
UBL3-201ENST00000380680 CDCA7Q9BWT1 371 aaPredicted RBP20.49■□□□□ 0.87
UBL3-201ENST00000380680 CCDC87Q9NVE4 849 aa20.49■□□□□ 0.87
UBL3-201ENST00000380680 TPCN1Q9ULQ1 816 aa20.49■□□□□ 0.87
UBL3-201ENST00000380680 NSFL1CQ9UNZ2 370 aaKnown RBP20.49■□□□□ 0.87
UBL3-201ENST00000380680 LUZP1Q86V48 1076 aa20.48■□□□□ 0.87
UBL3-201ENST00000380680 ARMT1Q9H993 441 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms