RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 VEGFBP49765 207 aa31.11■■■□□ 2.57
TNFRSF4-201ENST00000379236 EPHA10Q5JZY3 1008 aa31.11■■■□□ 2.57
TNFRSF4-201ENST00000379236 DCPSQ96C86 337 aaKnown RBP31.11■■■□□ 2.57
TNFRSF4-201ENST00000379236 CNNM1Q9NRU3 951 aa31.1■■■□□ 2.57
TNFRSF4-201ENST00000379236 LDHAL6AQ6ZMR3 332 aa31.09■■■□□ 2.57
TNFRSF4-201ENST00000379236 SUCLG2Q96I99 432 aa31.09■■■□□ 2.57
TNFRSF4-201ENST00000379236 ZNF646O15015 1829 aaPredicted RBP31.09■■■□□ 2.57
TNFRSF4-201ENST00000379236 CT47B1P0C2W7 299 aaPredicted RBP31.08■■■□□ 2.57
TNFRSF4-201ENST00000379236 TAF5LO75529 589 aa31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 EGFRP00533 1210 aa31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 NBPF7P0C2Y1 421 aaPredicted RBP31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 USP17L8P0C7I0 530 aa31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 CST9Q5W186 159 aa31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 USP48Q86UV5 1035 aa31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 TRMT2AQ8IZ69 625 aaKnown RBP31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 HELBQ8NG08 1087 aaPredicted RBP31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 ZNF594Q96JF6 807 aaPredicted RBP31.07■■■□□ 2.56
TNFRSF4-201ENST00000379236 MYO3BQ8WXR4 1341 aa31.06■■■□□ 2.56
TNFRSF4-201ENST00000379236 ECE1P42892 770 aa31.06■■■□□ 2.56
TNFRSF4-201ENST00000379236 GRM1Q13255 1194 aa31.06■■■□□ 2.56
TNFRSF4-201ENST00000379236 KRT26Q7Z3Y9 468 aa31.06■■■□□ 2.56
TNFRSF4-201ENST00000379236 TXNRD3Q86VQ6 643 aa31.06■■■□□ 2.56
TNFRSF4-201ENST00000379236 WDR33Q9C0J8 1336 aaKnown RBP31.05■■■□□ 2.56
TNFRSF4-201ENST00000379236 PLIN1O60240 522 aa31.05■■■□□ 2.56
TNFRSF4-201ENST00000379236 STRIP1Q5VSL9 837 aa31.05■■■□□ 2.56
TNFRSF4-201ENST00000379236 DIEXFQ68CQ4 756 aaKnown RBP31.05■■■□□ 2.56
TNFRSF4-201ENST00000379236 AIDAQ96BJ3 306 aa31.05■■■□□ 2.56
TNFRSF4-201ENST00000379236 TLL2Q9Y6L7 1015 aa31.05■■■□□ 2.56
TNFRSF4-201ENST00000379236 UTYO14607 1347 aa31.04■■■□□ 2.56
TNFRSF4-201ENST00000379236 KLRK1P26718 216 aa31.04■■■□□ 2.56
TNFRSF4-201ENST00000379236 ZNF280AP59817 542 aaPredicted RBP31.04■■■□□ 2.56
TNFRSF4-201ENST00000379236 OGFOD1Q8N543 542 aa31.04■■■□□ 2.56
TNFRSF4-201ENST00000379236 MYOZ2Q9NPC6 264 aa31.04■■■□□ 2.56
TNFRSF4-201ENST00000379236 GGA3Q9NZ52 723 aa31.04■■■□□ 2.56
TNFRSF4-201ENST00000379236 SULF1Q8IWU6 871 aa31.03■■■□□ 2.56
TNFRSF4-201ENST00000379236 DACT2Q5SW24 774 aa31.02■■■□□ 2.56
TNFRSF4-201ENST00000379236 TTLL5Q6EMB2 1281 aa31.02■■■□□ 2.56
TNFRSF4-201ENST00000379236 ZNF804AQ7Z570 1209 aa31.02■■■□□ 2.56
TNFRSF4-201ENST00000379236 GMLQ99445 158 aa31.02■■■□□ 2.56
TNFRSF4-201ENST00000379236 BICC1Q9H694 974 aaKnown RBP31.02■■■□□ 2.56
TNFRSF4-201ENST00000379236 CAPNS2Q96L46 248 aa31.01■■■□□ 2.55
TNFRSF4-201ENST00000379236 GTF2IP78347 998 aa31■■■□□ 2.55
TNFRSF4-201ENST00000379236 SCARF1Q14162 830 aa31■■■□□ 2.55
TNFRSF4-201ENST00000379236 CYP4F22Q6NT55 531 aa31■■■□□ 2.55
TNFRSF4-201ENST00000379236 MXD3Q9BW11 206 aa31■■■□□ 2.55
TNFRSF4-201ENST00000379236 CD209Q9NNX6 404 aa31■■■□□ 2.55
TNFRSF4-201ENST00000379236 ADM5C9JUS6 153 aa30.99■■■□□ 2.55
TNFRSF4-201ENST00000379236 SNAP23O00161 211 aa30.99■■■□□ 2.55
TNFRSF4-201ENST00000379236 SAPCD2Q86UD0 394 aa30.99■■■□□ 2.55
TNFRSF4-201ENST00000379236 KAZALD1Q96I82 304 aa30.99■■■□□ 2.55
TNFRSF4-201ENST00000379236 IFFO2Q5TF58 517 aa30.98■■■□□ 2.55
TNFRSF4-201ENST00000379236 ANGEL2Q5VTE6 544 aaKnown RBP30.98■■■□□ 2.55
TNFRSF4-201ENST00000379236 C15orf52Q6ZUT6 534 aaKnown RBP30.98■■■□□ 2.55
TNFRSF4-201ENST00000379236 HDAC9Q9UKV0 1011 aa30.98■■■□□ 2.55
TNFRSF4-201ENST00000379236 THSD7BQ9C0I4 1608 aa30.98■■■□□ 2.55
TNFRSF4-201ENST00000379236 MAP2K1Q02750 393 aaPredicted RBP30.97■■■□□ 2.55
TNFRSF4-201ENST00000379236 MIER1Q8N108 512 aa30.97■■■□□ 2.55
TNFRSF4-201ENST00000379236 API5Q9BZZ5 524 aaKnown RBP30.97■■■□□ 2.55
TNFRSF4-201ENST00000379236 NOB1Q9ULX3 412 aaKnown RBP30.97■■■□□ 2.55
TNFRSF4-201ENST00000379236 MMP14P50281 582 aa30.96■■■□□ 2.55
TNFRSF4-201ENST00000379236 RABL6Q3YEC7 729 aaPredicted RBP30.96■■■□□ 2.55
TNFRSF4-201ENST00000379236 ASTN2O75129 1339 aaPredicted RBP30.96■■■□□ 2.55
TNFRSF4-201ENST00000379236 MROH5Q6ZUA9 1318 aa30.96■■■□□ 2.55
TNFRSF4-201ENST00000379236 C2orf69Q8N8R5 385 aa30.95■■■□□ 2.55
TNFRSF4-201ENST00000379236 USP44Q9H0E7 712 aa30.95■■■□□ 2.55
TNFRSF4-201ENST00000379236 COL13A1Q5TAT6 717 aaPredicted RBP30.94■■■□□ 2.54
TNFRSF4-201ENST00000379236 DLK2Q6UY11 383 aa30.94■■■□□ 2.54
TNFRSF4-201ENST00000379236 KIAA0825Q8IV33 1275 aa30.94■■■□□ 2.54
TNFRSF4-201ENST00000379236 ANKRD44Q8N8A2 993 aa30.94■■■□□ 2.54
TNFRSF4-201ENST00000379236 HHIPL1Q96JK4 782 aa30.94■■■□□ 2.54
TNFRSF4-201ENST00000379236 GBA2Q9HCG7 927 aaPredicted RBP30.94■■■□□ 2.54
TNFRSF4-201ENST00000379236 FOXN1O15353 648 aa30.93■■■□□ 2.54
TNFRSF4-201ENST00000379236 HUNKP57058 714 aa30.93■■■□□ 2.54
TNFRSF4-201ENST00000379236 UBE4AQ14139 1066 aa30.93■■■□□ 2.54
TNFRSF4-201ENST00000379236 BEGAINQ9BUH8 593 aa30.93■■■□□ 2.54
TNFRSF4-201ENST00000379236 PUS3Q9BZE2 481 aaKnown RBP30.93■■■□□ 2.54
TNFRSF4-201ENST00000379236 KIF16BQ96L93 1317 aa30.93■■■□□ 2.54
TNFRSF4-201ENST00000379236 PITPNM2Q9BZ72 1349 aa30.93■■■□□ 2.54
TNFRSF4-201ENST00000379236 IRS2Q9Y4H2 1338 aa30.93■■■□□ 2.54
TNFRSF4-201ENST00000379236 ECM29Q5VYK3 1845 aa30.92■■■□□ 2.54
TNFRSF4-201ENST00000379236 UBTFL1P0CB47 393 aaPredicted RBP30.91■■■□□ 2.54
TNFRSF4-201ENST00000379236 IL1R1P14778 569 aa30.91■■■□□ 2.54
TNFRSF4-201ENST00000379236 RARSP54136 660 aaKnown RBP30.91■■■□□ 2.54
TNFRSF4-201ENST00000379236 BRPF1P55201 1214 aaPredicted RBP30.91■■■□□ 2.54
TNFRSF4-201ENST00000379236 METTL24Q5JXM2 366 aa30.91■■■□□ 2.54
TNFRSF4-201ENST00000379236 CDCA5Q96FF9 252 aa30.91■■■□□ 2.54
TNFRSF4-201ENST00000379236 WBP1LQ9NX94 342 aa30.91■■■□□ 2.54
TNFRSF4-201ENST00000379236 CTCFP49711 727 aaPredicted RBP30.9■■■□□ 2.54
TNFRSF4-201ENST00000379236 HNRNPUQ00839 825 aaKnown RBP eCLIP30.9■■■□□ 2.54
TNFRSF4-201ENST00000379236 NBPF9Q3BBW0 867 aa30.9■■■□□ 2.54
TNFRSF4-201ENST00000379236 HDAC5Q9UQL6 1122 aa30.9■■■□□ 2.54
TNFRSF4-201ENST00000379236 RIPOR2Q9Y4F9 1068 aa30.89■■■□□ 2.54
TNFRSF4-201ENST00000379236 AOC2O75106 756 aa30.88■■■□□ 2.53
TNFRSF4-201ENST00000379236 MAP2K2P36507 400 aa30.88■■■□□ 2.53
TNFRSF4-201ENST00000379236 VPS37DQ86XT2 251 aa30.88■■■□□ 2.53
TNFRSF4-201ENST00000379236 TNS4Q8IZW8 715 aa30.88■■■□□ 2.53
TNFRSF4-201ENST00000379236 ARAP2Q8WZ64 1704 aa30.87■■■□□ 2.53
TNFRSF4-201ENST00000379236 WNT10BO00744 389 aa30.87■■■□□ 2.53
TNFRSF4-201ENST00000379236 SASH1O94885 1247 aa30.87■■■□□ 2.53
TNFRSF4-201ENST00000379236 HIBADHP31937 336 aaKnown RBP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms