RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 HS1BP3Q53T59 392 aa16.92■□□□□ 0.3
EXT1-201ENST00000378204 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
EXT1-201ENST00000378204 NECAB1Q8N987 351 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 MRPS27Q92552 414 aaKnown RBP16.91■□□□□ 0.3
EXT1-201ENST00000378204 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
EXT1-201ENST00000378204 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 CTAGE9A4FU28 777 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 PPM1FP49593 454 aaPredicted RBP16.91■□□□□ 0.3
EXT1-201ENST00000378204 PDE1AP54750 535 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 RAB11FIP4Q86YS3 637 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 LRRC45Q96CN5 670 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 SKILP12757 684 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 DBN1Q16643 649 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 NBPF6Q5VWK0 638 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 NBPF5PQ86XG9 351 aaPredicted RBP16.91■□□□□ 0.3
EXT1-201ENST00000378204 NBPF4Q96M43 638 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 ESYT1Q9BSJ8 1104 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 RASAL2Q9UJF2 1139 aa16.91■□□□□ 0.3
EXT1-201ENST00000378204 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 CHPF2Q9P2E5 772 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 CCDC114Q96M63 670 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 KRT13P13646 458 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 PABPN1LA6NDY0 278 aaKnown RBP16.9■□□□□ 0.3
EXT1-201ENST00000378204 CYP7A1P22680 504 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 CALML3P27482 149 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
EXT1-201ENST00000378204 WHAMMP3Q1A5X7 153 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 CADPS2Q86UW7 1296 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 MEIS3Q99687 375 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 UTP14AQ9BVJ6 771 aaKnown RBP16.9■□□□□ 0.3
EXT1-201ENST00000378204 ACEP12821 1306 aa16.9■□□□□ 0.3
EXT1-201ENST00000378204 MMRN2Q9H8L6 949 aa16.89■□□□□ 0.3
EXT1-201ENST00000378204 TUBB4AP04350 444 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 CNPY2Q9Y2B0 182 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 KRBA2Q6ZNG9 492 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 PPFIA3O75145 1194 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 B4GALNT4Q76KP1 1039 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 SPATS2LQ9NUQ6 558 aaKnown RBP16.89■□□□□ 0.29
EXT1-201ENST00000378204 CTAGE15A4D2H0 777 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 CTAGE8P0CG41 777 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 Q6ZUG5 572 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 CTAGE6Q86UF2 777 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 CTAGE4Q8IX94 777 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 ANKRD44Q8N8A2 993 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 IQCGQ9H095 443 aaKnown RBP16.89■□□□□ 0.29
EXT1-201ENST00000378204 TACC1O75410 805 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 HEATR3Q7Z4Q2 680 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 SRRTQ9BXP5 876 aaKnown RBP16.89■□□□□ 0.29
EXT1-201ENST00000378204 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
EXT1-201ENST00000378204 SLC4A4Q9Y6R1 1079 aa16.89■□□□□ 0.29
EXT1-201ENST00000378204 CEP120Q8N960 986 aa16.88■□□□□ 0.29
EXT1-201ENST00000378204 DDX23Q9BUQ8 820 aaKnown RBP16.88■□□□□ 0.29
EXT1-201ENST00000378204 GCKP35557 465 aa16.88■□□□□ 0.29
EXT1-201ENST00000378204 SSX2IPQ9Y2D8 614 aa16.88■□□□□ 0.29
EXT1-201ENST00000378204 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
EXT1-201ENST00000378204 KIF5AQ12840 1032 aa16.88■□□□□ 0.29
EXT1-201ENST00000378204 ZNF853P0CG23 659 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 LRRC2Q9BYS8 371 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 DISP3Q9P2K9 1392 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 OPA1O60313 960 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 PHACTR2O75167 634 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
EXT1-201ENST00000378204 STMN4Q9H169 189 aaPredicted RBP16.87■□□□□ 0.29
EXT1-201ENST00000378204 DNAI1Q9UI46 699 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 KRT83P78385 493 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 FBXO31Q5XUX0 539 aaPredicted RBP16.87■□□□□ 0.29
EXT1-201ENST00000378204 KRT86O43790 486 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 MCM6Q14566 821 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 DACT1Q9NYF0 836 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 NOLC1Q14978 699 aaKnown RBP eCLIP16.87■□□□□ 0.29
EXT1-201ENST00000378204 SNX21Q969T3 373 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 TRIM75PA6NK02 468 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 GNAT2P19087 354 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 LMBR1Q8WVP7 490 aa16.87■□□□□ 0.29
EXT1-201ENST00000378204 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 SYT1P21579 422 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 CCDC77Q9BR77 488 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 IMPG2Q9BZV3 1241 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 C6orf50Q9HD87 102 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 STIM2Q9P246 746 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 TERF1P54274 439 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 ASIC1P78348 528 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 XAGE3Q8WTP9 111 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 FANCAO15360 1455 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 EIF2AK4Q9P2K8 1649 aaKnown RBP16.86■□□□□ 0.29
EXT1-201ENST00000378204 ANXA1P04083 346 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 MARCKSP29966 332 aaPredicted RBP16.86■□□□□ 0.29
EXT1-201ENST00000378204 VCXQ9H320 206 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 NLRP3Q96P20 1036 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 ATP2A1O14983 1001 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 PTGS1P23219 599 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 NAPAP54920 295 aa16.86■□□□□ 0.29
EXT1-201ENST00000378204 CALM1P0DP23 149 aa16.85■□□□□ 0.29
EXT1-201ENST00000378204 CALM2P0DP24 149 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms