RNA–Protein interactions for RNA: ENST00000377768.7

SNX5-202, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-202ENST00000377768 LIMCH1Q9UPQ0 1083 aa18.46■□□□□ 0.55
SNX5-202ENST00000377768 PALLDQ8WX93 1383 aa18.46■□□□□ 0.55
SNX5-202ENST00000377768 ZNF609O15014 1411 aa18.46■□□□□ 0.55
SNX5-202ENST00000377768 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
SNX5-202ENST00000377768 CSF1RP07333 972 aa18.46■□□□□ 0.54
SNX5-202ENST00000377768 EIF5P55010 431 aaKnown RBP18.46■□□□□ 0.54
SNX5-202ENST00000377768 IFIT5Q13325 482 aaKnown RBP18.46■□□□□ 0.54
SNX5-202ENST00000377768 SYCP1Q15431 976 aa18.46■□□□□ 0.54
SNX5-202ENST00000377768 GPR108Q9NPR9 543 aa18.46■□□□□ 0.54
SNX5-202ENST00000377768 UBN2Q6ZU65 1347 aa18.45■□□□□ 0.54
SNX5-202ENST00000377768 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
SNX5-202ENST00000377768 ZNF589Q86UQ0 364 aaPredicted RBP18.45■□□□□ 0.54
SNX5-202ENST00000377768 CEP126Q9P2H0 1117 aa18.45■□□□□ 0.54
SNX5-202ENST00000377768 CDHR2Q9BYE9 1310 aa18.45■□□□□ 0.54
SNX5-202ENST00000377768 MYH14Q7Z406 1995 aaKnown RBP18.44■□□□□ 0.54
SNX5-202ENST00000377768 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
SNX5-202ENST00000377768 CCDC192P0DO97 292 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 CPA1P15085 419 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 PTGS1P23219 599 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 KCNJ4P48050 445 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 DNM1Q05193 864 aaKnown RBP18.44■□□□□ 0.54
SNX5-202ENST00000377768 GREM2Q9H772 168 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 SMC3Q9UQE7 1217 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 MTMR6Q9Y217 621 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 RBM8AQ9Y5S9 174 aaKnown RBP18.44■□□□□ 0.54
SNX5-202ENST00000377768 JCADQ9P266 1359 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 LARGE1O95461 756 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 TTLL11Q8NHH1 800 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 MED23Q9ULK4 1368 aa18.44■□□□□ 0.54
SNX5-202ENST00000377768 CASTP20810 708 aaKnown RBP18.43■□□□□ 0.54
SNX5-202ENST00000377768 FAM200AQ8TCP9 573 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 MYH3P11055 1940 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 ITGA6P23229 1130 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 CTSWP56202 376 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 NECTIN1Q15223 517 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 VPS72Q15906 364 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 MAP4K1Q92918 833 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
SNX5-202ENST00000377768 SNRKQ9NRH2 765 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 OGFRQ9NZT2 677 aa18.43■□□□□ 0.54
SNX5-202ENST00000377768 GOLIM4O00461 696 aa18.42■□□□□ 0.54
SNX5-202ENST00000377768 ZNF34Q8IZ26 560 aa18.42■□□□□ 0.54
SNX5-202ENST00000377768 JAKMIP1Q96N16 626 aaKnown RBP18.42■□□□□ 0.54
SNX5-202ENST00000377768 CTNNA3Q9UI47 895 aa18.42■□□□□ 0.54
SNX5-202ENST00000377768 SMTNL1A8MU46 457 aa18.41■□□□□ 0.54
SNX5-202ENST00000377768 GJB2P29033 226 aa18.41■□□□□ 0.54
SNX5-202ENST00000377768 CREB3L3Q68CJ9 461 aa18.41■□□□□ 0.54
SNX5-202ENST00000377768 SEC62Q99442 399 aaKnown RBP18.41■□□□□ 0.54
SNX5-202ENST00000377768 PAG1Q9NWQ8 432 aa18.41■□□□□ 0.54
SNX5-202ENST00000377768 MRVI1Q9Y6F6 885 aa18.41■□□□□ 0.54
SNX5-202ENST00000377768 ADORA1P30542 326 aa18.4■□□□□ 0.54
SNX5-202ENST00000377768 KBTBD3Q8NAB2 608 aa18.4■□□□□ 0.54
SNX5-202ENST00000377768 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
SNX5-202ENST00000377768 IFIT1P09914 478 aaKnown RBP18.4■□□□□ 0.54
SNX5-202ENST00000377768 ZKSCAN1P17029 563 aaPredicted RBP18.4■□□□□ 0.54
SNX5-202ENST00000377768 KCNQ4P56696 695 aa18.4■□□□□ 0.54
SNX5-202ENST00000377768 LDHAL6AQ6ZMR3 332 aa18.4■□□□□ 0.54
SNX5-202ENST00000377768 CCDC129Q6ZRS4 1044 aa18.4■□□□□ 0.54
SNX5-202ENST00000377768 PDE8AO60658 829 aa18.39■□□□□ 0.54
SNX5-202ENST00000377768 ST3GAL1Q11201 340 aa18.39■□□□□ 0.54
SNX5-202ENST00000377768 SLFNL1Q499Z3 407 aa18.39■□□□□ 0.54
SNX5-202ENST00000377768 SMARCC1Q92922 1105 aaPredicted RBP18.39■□□□□ 0.54
SNX5-202ENST00000377768 KCNB2Q92953 911 aa18.39■□□□□ 0.54
SNX5-202ENST00000377768 ANKRD18BA2A2Z9 1011 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 SLC27A2O14975 620 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 IGSF3O75054 1194 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 TAF5LO75529 589 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 CAMTA2O94983 1202 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 LRMPQ12912 555 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 RIC1Q4ADV7 1423 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 GORABQ5T7V8 394 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 SUSD4Q5VX71 490 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 PTF1AQ7RTS3 328 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 CCDC83Q8IWF9 413 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 RFX7Q2KHR2 1363 aa18.39■□□□□ 0.53
SNX5-202ENST00000377768 TYRO3Q06418 890 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 GABPB1Q06547 395 aaPredicted RBP18.38■□□□□ 0.53
SNX5-202ENST00000377768 METTL24Q5JXM2 366 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 FNBP4Q8N3X1 1017 aaPredicted RBP18.38■□□□□ 0.53
SNX5-202ENST00000377768 C16orf45Q96MC5 204 aaPredicted RBP18.38■□□□□ 0.53
SNX5-202ENST00000377768 CNNM1Q9NRU3 951 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 USP21Q9UK80 565 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 TAF6LQ9Y6J9 622 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 RREB1Q92766 1687 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 CCDC186Q7Z3E2 898 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 TTC6Q86TZ1 520 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 LUZP1Q86V48 1076 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 DDX41Q9UJV9 622 aaKnown RBP18.38■□□□□ 0.53
SNX5-202ENST00000377768 RIPOR2Q9Y4F9 1068 aa18.38■□□□□ 0.53
SNX5-202ENST00000377768 COL9A3Q14050 684 aaPredicted RBP18.37■□□□□ 0.53
SNX5-202ENST00000377768 PLA2G4DQ86XP0 818 aa18.37■□□□□ 0.53
SNX5-202ENST00000377768 NUP62CLQ9H1M0 184 aa18.37■□□□□ 0.53
SNX5-202ENST00000377768 CYP46A1Q9Y6A2 500 aa18.37■□□□□ 0.53
SNX5-202ENST00000377768 ELP1O95163 1332 aa18.37■□□□□ 0.53
SNX5-202ENST00000377768 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX5-202ENST00000377768 MCMDC2Q4G0Z9 681 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms