RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 C7orf25Q9BPX7 421 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 PSMA5P28066 241 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 HSPA1LP34931 641 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 CNGA2Q16280 664 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 QKIQ96PU8 341 aaKnown RBP eCLIP6.71□□□□□ -1.33
SCN2A-202ENST00000375427 SMIM23A6NLE4 172 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 KDM1AO60341 852 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 NEMFO60524 1076 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 PRIMPOLQ96LW4 560 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 URI1O94763 535 aaPredicted RBP6.71□□□□□ -1.33
SCN2A-202ENST00000375427 CAPN1P07384 714 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 TSTA3Q13630 321 aaPredicted RBP6.71□□□□□ -1.33
SCN2A-202ENST00000375427 RUFY4Q6ZNE9 571 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 PDE9AO76083 593 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 ST13P4Q8IZP2 240 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 PHKBQ93100 1093 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 BRPF3Q9ULD4 1205 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 GIGYF1O75420 1035 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 TSPAN9O75954 239 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 C4BPBP20851 252 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 MCM2P49736 904 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 TRIML1Q8N9V2 468 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 HELLSQ9NRZ9 838 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 RNF40O75150 1001 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 KRT3P12035 628 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 BIRC5O15392 142 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 NBPF7P0C2Y1 421 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 ZC3H6P61129 1189 aaKnown RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 XPCQ01831 940 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 VPS37DQ86XT2 251 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 C6orf203Q9P0P8 240 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 CAPN11Q9UMQ6 739 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 MYH9P35579 1960 aaKnown RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 GTF2E1P29083 439 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 C11orf88Q6PI97 169 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 POLR3CQ9BUI4 534 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 MPP6Q9NZW5 540 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 SYNPO2Q9UMS6 1093 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 SPDYE4A6NLX3 237 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 KRT80Q6KB66 452 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ZNF354CQ86Y25 554 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 MCF2L2Q86YR7 1114 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 STAG1Q8WVM7 1258 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 FSD1Q9BTV5 496 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 GAS8O95995 478 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 SERPINB6P35237 376 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TMED10P49755 219 aaKnown RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TRIM68Q6AZZ1 485 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 NFRKBQ6P4R8 1299 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 DENND6AQ8IWF6 608 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 PIP4K2CQ8TBX8 421 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 FERMT2Q96AC1 680 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 BAG5Q9UL15 447 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 PPP2R5AQ15172 486 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ACBD5Q5T8D3 534 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 CC2D2BQ6DHV5 1058 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 EFCAB13Q8IY85 973 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 RAPGEF4Q8WZA2 1011 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ZNF330Q9Y3S2 320 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 CCNB3Q8WWL7 1395 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 NINQ8N4C6 2090 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ZEB2O60315 1214 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 MRPS35P82673 323 aaKnown RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 HOOK2Q96ED9 719 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 GRPEL1Q9HAV7 217 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 VEZTQ9HBM0 779 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TRPC6Q9Y210 931 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TUBBP07437 444 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TSHZ2Q9NRE2 1034 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TSKSQ9UJT2 592 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ARID1AO14497 2285 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 HIP1O00291 1037 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 FCHSD2O94868 740 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TOP1P11387 765 aaKnown RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 GABPB2Q8TAK5 448 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 OLFM1Q99784 485 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 IRAK4Q9NWZ3 460 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 CHMP2BQ9UQN3 213 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 FLOT1O75955 427 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 CTNNA1P35221 906 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 RINLQ6ZS11 566 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 NLRP4Q96MN2 994 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 TTC1Q99614 292 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 SELENOOQ9BVL4 669 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 CDV3Q9UKY7 258 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 DEAF1O75398 565 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 CCDC186Q7Z3E2 898 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 FAM76AQ8TAV0 307 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 UPF3BQ9BZI7 483 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 PRR23D1E9PI22 279 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 XPOTO43592 962 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 PRR23D2P0DMB1 279 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 TEKT4Q8WW24 435 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 LNPKQ9C0E8 428 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 PARVBQ9HBI1 364 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 HAND2P61296 217 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 KRT83P78385 493 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 GRSF1Q12849 480 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms