RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 RTL9Q8NET4 1388 aa8.34□□□□□ -1.07
TCEA3-202ENST00000374602 LAMB1P07942 1786 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 IRS4O14654 1257 aaPredicted RBP8.33□□□□□ -1.08
TCEA3-202ENST00000374602 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
TCEA3-202ENST00000374602 GPSM2P81274 684 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 ANGEL2Q5VTE6 544 aaKnown RBP8.33□□□□□ -1.08
TCEA3-202ENST00000374602 RSBN1LQ6PCB5 846 aaPredicted RBP8.33□□□□□ -1.08
TCEA3-202ENST00000374602 ANKRD13DQ6ZTN6 518 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 OGFOD1Q8N543 542 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 TBC1D16Q8TBP0 767 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 FAM89AQ96GI7 184 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 HYPKQ9NX55 129 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 POLLQ9UGP5 575 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 RCAN3Q9UKA8 241 aa8.33□□□□□ -1.08
TCEA3-202ENST00000374602 LAS1LQ9Y4W2 734 aaKnown RBP8.33□□□□□ -1.08
TCEA3-202ENST00000374602 XDHP47989 1333 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 MYO3BQ8WXR4 1341 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 KIAA0100Q14667 2235 aaKnown RBP8.32□□□□□ -1.08
TCEA3-202ENST00000374602 ATP5J2-PTCD1G3V325 749 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 EGFRP00533 1210 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 VIL1P09327 827 aaKnown RBP8.32□□□□□ -1.08
TCEA3-202ENST00000374602 USP17L8P0C7I0 530 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 RPS8P62241 208 aaKnown RBP8.32□□□□□ -1.08
TCEA3-202ENST00000374602 CSRNP1Q96S65 589 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 ISCA1Q9BUE6 129 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 CHMP4AQ9BY43 222 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 MYOZ2Q9NPC6 264 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 PODXL2Q9NZ53 605 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 HPS5Q9UPZ3 1129 aa8.32□□□□□ -1.08
TCEA3-202ENST00000374602 COL1A1P02452 1464 aaPredicted RBP8.32□□□□□ -1.08
TCEA3-202ENST00000374602 FANCIQ9NVI1 1328 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 DDX58O95786 925 aaKnown RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 ATP2B4P23634 1241 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 MMP14P50281 582 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 VASPP50552 380 aaPredicted RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 ZNF280AP59817 542 aaPredicted RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 SCARF1Q14162 830 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 FBXO46Q6PJ61 603 aaPredicted RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 ARMC9Q7Z3E5 817 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 RIC3Q7Z5B4 369 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 ANKRD18AQ8IVF6 992 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 ZBTB38Q8NAP3 1195 aaPredicted RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 FBXW7Q969H0 707 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 CDC5LQ99459 802 aaKnown RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 SUPT16HQ9Y5B9 1047 aaKnown RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 CACNA1FO60840 1977 aa8.31□□□□□ -1.08
TCEA3-202ENST00000374602 ZNF646O15015 1829 aaPredicted RBP8.31□□□□□ -1.08
TCEA3-202ENST00000374602 USP17L3A6NCW0 530 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 USP17L4A6NCW7 530 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 ALDH1A1P00352 501 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 ZNF853P0CG23 659 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 TRIM28Q13263 835 aaKnown RBP8.3□□□□□ -1.08
TCEA3-202ENST00000374602 USP17L1Q7RTZ2 530 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 PODNQ7Z5L7 613 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 APOBEC3FQ8IUX4 373 aaKnown RBP8.3□□□□□ -1.08
TCEA3-202ENST00000374602 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.3□□□□□ -1.08
TCEA3-202ENST00000374602 ZNF296Q8WUU4 475 aaPredicted RBP8.3□□□□□ -1.08
TCEA3-202ENST00000374602 ZNF428Q96B54 188 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 MED23Q9ULK4 1368 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 COL4A1P02462 1669 aa8.3□□□□□ -1.08
TCEA3-202ENST00000374602 PDE8AO60658 829 aa8.29□□□□□ -1.08
TCEA3-202ENST00000374602 FKTNO75072 461 aa8.29□□□□□ -1.08
TCEA3-202ENST00000374602 DLK2Q6UY11 383 aa8.29□□□□□ -1.08
TCEA3-202ENST00000374602 CCDC191Q8NCU4 936 aa8.29□□□□□ -1.08
TCEA3-202ENST00000374602 TSR2Q969E8 191 aaKnown RBP8.29□□□□□ -1.08
TCEA3-202ENST00000374602 CWC25Q9NXE8 425 aaPredicted RBP8.29□□□□□ -1.08
TCEA3-202ENST00000374602 ASTN2O75129 1339 aaPredicted RBP8.29□□□□□ -1.08
TCEA3-202ENST00000374602 GPR25O00155 361 aa8.28□□□□□ -1.08
TCEA3-202ENST00000374602 CHL1O00533 1208 aa8.28□□□□□ -1.08
TCEA3-202ENST00000374602 TBC1D8O95759 1140 aa8.28□□□□□ -1.08
TCEA3-202ENST00000374602 PCCAP05165 728 aaPredicted RBP8.28□□□□□ -1.08
TCEA3-202ENST00000374602 EXOSC9Q06265 439 aaKnown RBP8.28□□□□□ -1.08
TCEA3-202ENST00000374602 MYD88Q99836 296 aa8.28□□□□□ -1.08
TCEA3-202ENST00000374602 KCNQ5Q9NR82 932 aa8.28□□□□□ -1.08
TCEA3-202ENST00000374602 MBIPQ9NS73 344 aa8.28□□□□□ -1.08
TCEA3-202ENST00000374602 GTF3C3Q9Y5Q9 886 aa8.28□□□□□ -1.08
TCEA3-202ENST00000374602 A0A1B0GUL6 1792 aa8.27□□□□□ -1.08
TCEA3-202ENST00000374602 UBE2Q2LH0YL09 131 aa8.27□□□□□ -1.09
TCEA3-202ENST00000374602 IGHMBP2P38935 993 aaKnown RBP8.27□□□□□ -1.09
TCEA3-202ENST00000374602 RRP1P56182 461 aaKnown RBP8.27□□□□□ -1.09
TCEA3-202ENST00000374602 NEXNQ0ZGT2 675 aa8.27□□□□□ -1.09
TCEA3-202ENST00000374602 MKRN3Q13064 507 aaKnown RBP8.27□□□□□ -1.09
TCEA3-202ENST00000374602 KRT24Q2M2I5 525 aa8.27□□□□□ -1.09
TCEA3-202ENST00000374602 INTS3Q68E01 1043 aaKnown RBP8.27□□□□□ -1.09
TCEA3-202ENST00000374602 OTUD7BQ6GQQ9 843 aa8.27□□□□□ -1.09
TCEA3-202ENST00000374602 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.09
TCEA3-202ENST00000374602 ARAP2Q8WZ64 1704 aa8.26□□□□□ -1.09
TCEA3-202ENST00000374602 OTOFQ9HC10 1997 aa8.26□□□□□ -1.09
TCEA3-202ENST00000374602 CENPFP49454 3210 aa8.26□□□□□ -1.09
TCEA3-202ENST00000374602 MANSC4A6NHS7 340 aaPredicted RBP8.26□□□□□ -1.09
TCEA3-202ENST00000374602 MYO1BO43795 1136 aa8.26□□□□□ -1.09
TCEA3-202ENST00000374602 PPP1R12BO60237 982 aaPredicted RBP8.26□□□□□ -1.09
TCEA3-202ENST00000374602 KCNJ4P48050 445 aa8.26□□□□□ -1.09
TCEA3-202ENST00000374602 TM4SF4P48230 202 aa8.26□□□□□ -1.09
TCEA3-202ENST00000374602 RARSP54136 660 aaKnown RBP8.26□□□□□ -1.09
TCEA3-202ENST00000374602 CTSWP56202 376 aa8.26□□□□□ -1.09
TCEA3-202ENST00000374602 INHBEP58166 350 aa8.26□□□□□ -1.09
TCEA3-202ENST00000374602 STRIP1Q5VSL9 837 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms