RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 PHKBQ93100 1093 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 ZSWIM6Q9HCJ5 1215 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 B4E1Z4 1266 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 ZNF213O14771 459 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 RAD21O60216 631 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 CLCN1P35523 988 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 KRT85P78386 507 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 ARMT1Q9H993 441 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 MTMR6Q9Y217 621 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 PRKAB2O43741 272 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 KCNA4P22459 653 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 GYG1P46976 350 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 TDO2P48775 406 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 TTC14Q96N46 770 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 GPR101Q96P66 508 aaPredicted RBP12.73□□□□□ -0.37
CXCL12-203ENST00000374429 FAM13BQ9NYF5 915 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
CXCL12-203ENST00000374429 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 UBE2Q2LH0YL09 131 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 FGAP02671 866 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 CDK11BP21127 795 aaKnown RBP12.73□□□□□ -0.37
CXCL12-203ENST00000374429 NLRP10Q86W26 655 aa12.73□□□□□ -0.37
CXCL12-203ENST00000374429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.73□□□□□ -0.37
CXCL12-203ENST00000374429 SMIM22K7EJ46 135 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 RNF113AO15541 343 aaKnown RBP12.72□□□□□ -0.37
CXCL12-203ENST00000374429 GPAA1O43292 621 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 MARCKSP29966 332 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-203ENST00000374429 TOB2Q14106 344 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-203ENST00000374429 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 IPO4Q8TEX9 1081 aaKnown RBP12.72□□□□□ -0.37
CXCL12-203ENST00000374429 HAUS7Q99871 368 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 E7EWF7 191 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 MBD3O95983 291 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 CRKLP46109 303 aaKnown RBP12.72□□□□□ -0.37
CXCL12-203ENST00000374429 ZRSR1Q15695 479 aaKnown RBP12.72□□□□□ -0.37
CXCL12-203ENST00000374429 LTN1O94822 1766 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 MAST3O60307 1309 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 SCRN1Q12765 414 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 CUL4AQ13619 759 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
CXCL12-203ENST00000374429 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 ADD1P35611 737 aaKnown RBP12.71□□□□□ -0.37
CXCL12-203ENST00000374429 ST3GAL1Q11201 340 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 IMMTQ16891 758 aaKnown RBP12.71□□□□□ -0.37
CXCL12-203ENST00000374429 SPECC1Q5M775 1068 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 SDR42E1Q8WUS8 393 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 TNMDQ9H2S6 317 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.37
CXCL12-203ENST00000374429 MCAMP43121 646 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 PTPN21Q16825 1174 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 LUZP1Q86V48 1076 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 SDF4Q9BRK5 362 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 NFAT5O94916 1531 aa12.71□□□□□ -0.37
CXCL12-203ENST00000374429 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.38
CXCL12-203ENST00000374429 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.38
CXCL12-203ENST00000374429 PRC1O43663 620 aa12.71□□□□□ -0.38
CXCL12-203ENST00000374429 CYP2E1P05181 493 aaPredicted RBP12.71□□□□□ -0.38
CXCL12-203ENST00000374429 SIK1P57059 783 aa12.71□□□□□ -0.38
CXCL12-203ENST00000374429 PTMSP20962 102 aa12.7□□□□□ -0.38
CXCL12-203ENST00000374429 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-203ENST00000374429 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
CXCL12-203ENST00000374429 ZNF532Q9HCE3 1301 aa12.7□□□□□ -0.38
CXCL12-203ENST00000374429 ZSCAN31Q96LW9 406 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-203ENST00000374429 MBD4O95243 580 aa12.7□□□□□ -0.38
CXCL12-203ENST00000374429 CCDC102BQ68D86 513 aa12.7□□□□□ -0.38
CXCL12-203ENST00000374429 ZBTB38Q8NAP3 1195 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-203ENST00000374429 INTS4Q96HW7 963 aaKnown RBP12.7□□□□□ -0.38
CXCL12-203ENST00000374429 NAPBQ9H115 298 aa12.7□□□□□ -0.38
CXCL12-203ENST00000374429 SENP2Q9HC62 589 aa12.7□□□□□ -0.38
CXCL12-203ENST00000374429 AKAP2Q9Y2D5 859 aa12.7□□□□□ -0.38
CXCL12-203ENST00000374429 ZNF609O15014 1411 aa12.69□□□□□ -0.38
CXCL12-203ENST00000374429 TPM2P07951 284 aa12.69□□□□□ -0.38
CXCL12-203ENST00000374429 IGHMBP2P38935 993 aaKnown RBP12.69□□□□□ -0.38
CXCL12-203ENST00000374429 CTSWP56202 376 aa12.69□□□□□ -0.38
CXCL12-203ENST00000374429 PIH1D3Q9NQM4 214 aaKnown RBP12.69□□□□□ -0.38
CXCL12-203ENST00000374429 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-203ENST00000374429 COL15A1P39059 1388 aa12.69□□□□□ -0.38
CXCL12-203ENST00000374429 AOX1Q06278 1338 aa12.69□□□□□ -0.38
CXCL12-203ENST00000374429 GNPATO15228 680 aa12.69□□□□□ -0.38
CXCL12-203ENST00000374429 CYP19A1P11511 503 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-203ENST00000374429 ORC3Q9UBD5 711 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-203ENST00000374429 MAP3K15Q6ZN16 1313 aa12.69□□□□□ -0.38
CXCL12-203ENST00000374429 ADCY5O95622 1261 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
CXCL12-203ENST00000374429 TSC1Q92574 1164 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 A0A1B0GVL5 298 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 RANBP6O60518 1105 aaKnown RBP12.68□□□□□ -0.38
CXCL12-203ENST00000374429 MARCH10Q8NA82 808 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-203ENST00000374429 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 NR1I2O75469 434 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 ANKRD1Q15327 319 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-203ENST00000374429 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 DNAJC25Q9H1X3 360 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 BAZ2BQ9UIF8 2168 aaKnown RBP12.68□□□□□ -0.38
CXCL12-203ENST00000374429 CAMTA1Q9Y6Y1 1673 aa12.68□□□□□ -0.38
CXCL12-203ENST00000374429 CASP7P55210 303 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms