RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 ABCB6Q9NP58 842 aa17.5■□□□□ 0.39
SRPK1-204ENST00000373825 JAK2O60674 1132 aa17.5■□□□□ 0.39
SRPK1-204ENST00000373825 KCNG4Q8TDN1 519 aa17.5■□□□□ 0.39
SRPK1-204ENST00000373825 C9orf84Q5VXU9 1444 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 CCDC122Q5T0U0 273 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 RUFY3Q7L099 469 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 ARFGAP2Q8N6H7 521 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 FBF1Q8TES7 1133 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 TPX2Q9ULW0 747 aaKnown RBP17.49■□□□□ 0.39
SRPK1-204ENST00000373825 CCDC160A6NGH7 325 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 DDX58O95786 925 aaKnown RBP17.49■□□□□ 0.39
SRPK1-204ENST00000373825 CHST3Q7LGC8 479 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 SELENOSQ9BQE4 189 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 MACROD2A1Z1Q3 448 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 GOLGA8BA8MQT2 603 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 PPFIA1Q13136 1202 aa17.49■□□□□ 0.39
SRPK1-204ENST00000373825 XBP1P17861 261 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 CASP8Q14790 479 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
SRPK1-204ENST00000373825 IL16Q14005 1332 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 CCDC50Q8IVM0 306 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 AKR1B10O60218 316 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 SLC20A2Q08357 652 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 CREB3L3Q68CJ9 461 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 IQCA1Q86XH1 822 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 IGSF22Q8N9C0 903 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 ME3Q16798 604 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
SRPK1-204ENST00000373825 CCDC170Q8IYT3 715 aa17.48■□□□□ 0.39
SRPK1-204ENST00000373825 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 PLA2G4AP47712 749 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 TRIM21P19474 475 aaKnown RBP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 EIF4E1BA6NMX2 242 aaKnown RBP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 CHUKO15111 745 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 CCT6AP40227 531 aaKnown RBP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 RNASE9P60153 205 aaKnown RBP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 HAND2P61296 217 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 SEPT7Q16181 437 aaKnown RBP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 SETSIPP0DME0 302 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 CUL4AQ13619 759 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 TAF7Q15545 349 aaPredicted RBP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 MUM1L1Q5H9M0 696 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 EVI5LQ96CN4 794 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 GNL3LQ9NVN8 582 aaKnown RBP17.47■□□□□ 0.39
SRPK1-204ENST00000373825 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
SRPK1-204ENST00000373825 ZFYVE27Q5T4F4 411 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 NUTM2GQ5VZR2 741 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 SRGAP1Q7Z6B7 1085 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 SLF1Q9BQI6 1058 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 PIK3C2GO75747 1445 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 KRT86O43790 486 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 SMIM24O75264 130 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 IDEP14735 1019 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 FLIIQ13045 1269 aa17.46■□□□□ 0.39
SRPK1-204ENST00000373825 ANKRD18BA2A2Z9 1011 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-204ENST00000373825 ZKSCAN8Q15776 578 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-204ENST00000373825 TRMT44Q8IYL2 757 aaKnown RBP17.45■□□□□ 0.38
SRPK1-204ENST00000373825 EHBP1Q8NDI1 1231 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 TCP11Q8WWU5 503 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 YIPF3Q9GZM5 350 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 STK38LQ9Y2H1 464 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 PTPDC1A2A3K4 754 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 ENO4A6NNW6 628 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-204ENST00000373825 CACNA2D4Q7Z3S7 1137 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 POLR3AO14802 1390 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-204ENST00000373825 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 VIMP08670 466 aaKnown RBP17.45■□□□□ 0.38
SRPK1-204ENST00000373825 GPIHBP1Q8IV16 184 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
SRPK1-204ENST00000373825 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
SRPK1-204ENST00000373825 SPDL1Q96EA4 605 aa17.44■□□□□ 0.38
SRPK1-204ENST00000373825 NFE2L3Q9Y4A8 694 aa17.44■□□□□ 0.38
SRPK1-204ENST00000373825 LACTBP83111 547 aaPredicted RBP17.44■□□□□ 0.38
SRPK1-204ENST00000373825 TTC41PQ6P2S7 1318 aa17.44■□□□□ 0.38
SRPK1-204ENST00000373825 KIF5AQ12840 1032 aa17.44■□□□□ 0.38
SRPK1-204ENST00000373825 CCDC129Q6ZRS4 1044 aa17.44■□□□□ 0.38
SRPK1-204ENST00000373825 PRPF4BQ13523 1007 aaKnown RBP17.43■□□□□ 0.38
SRPK1-204ENST00000373825 WHAMMP3Q1A5X7 153 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 HECW1Q76N89 1606 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 RPGRIP1LQ68CZ1 1315 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 PRR29P0C7W0 189 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 MXRA7P84157 204 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 FYB1O15117 783 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 DDIT3P35638 169 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 PACS2Q86VP3 889 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 LMNTD2Q8IXW0 634 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 PRAM1Q96QH2 718 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.43■□□□□ 0.38
SRPK1-204ENST00000373825 CDKL5O76039 1030 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 SLC8A1P32418 973 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms