RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ALDH1L2Q3SY69 923 aa23.86■■□□□ 1.41
TMEM53-201ENST00000372235 RBM26Q5T8P6 1007 aaKnown RBP23.86■■□□□ 1.41
TMEM53-201ENST00000372235 SAPCD2Q86UD0 394 aa23.86■■□□□ 1.41
TMEM53-201ENST00000372235 SULF1Q8IWU6 871 aa23.86■■□□□ 1.41
TMEM53-201ENST00000372235 BEGAINQ9BUH8 593 aa23.86■■□□□ 1.41
TMEM53-201ENST00000372235 SHTN1A0MZ66 631 aa23.85■■□□□ 1.41
TMEM53-201ENST00000372235 MAP2K2P36507 400 aa23.85■■□□□ 1.41
TMEM53-201ENST00000372235 CTCFP49711 727 aaPredicted RBP23.85■■□□□ 1.41
TMEM53-201ENST00000372235 LMBR1LQ6UX01 489 aa23.85■■□□□ 1.41
TMEM53-201ENST00000372235 USP48Q86UV5 1035 aa23.85■■□□□ 1.41
TMEM53-201ENST00000372235 CAPNS2Q96L46 248 aa23.85■■□□□ 1.41
TMEM53-201ENST00000372235 MRPL50Q8N5N7 158 aaKnown RBP23.84■■□□□ 1.41
TMEM53-201ENST00000372235 GMLQ99445 158 aa23.84■■□□□ 1.41
TMEM53-201ENST00000372235 ZNF408Q9H9D4 720 aa23.84■■□□□ 1.41
TMEM53-201ENST00000372235 WBP1LQ9NX94 342 aa23.84■■□□□ 1.41
TMEM53-201ENST00000372235 PSME4Q14997 1843 aa23.84■■□□□ 1.41
TMEM53-201ENST00000372235 SPEF2Q9C093 1822 aa23.83■■□□□ 1.41
TMEM53-201ENST00000372235 COL13A1Q5TAT6 717 aaPredicted RBP23.83■■□□□ 1.41
TMEM53-201ENST00000372235 LDHAL6AQ6ZMR3 332 aa23.83■■□□□ 1.41
TMEM53-201ENST00000372235 C15orf52Q6ZUT6 534 aaKnown RBP23.83■■□□□ 1.41
TMEM53-201ENST00000372235 MYOZ2Q9NPC6 264 aa23.83■■□□□ 1.41
TMEM53-201ENST00000372235 SCN9AQ15858 1988 aa23.83■■□□□ 1.41
TMEM53-201ENST00000372235 PITPNM2Q9BZ72 1349 aa23.83■■□□□ 1.4
TMEM53-201ENST00000372235 FMR1Q06787 632 aaKnown RBP eCLIP23.82■■□□□ 1.4
TMEM53-201ENST00000372235 C2orf69Q8N8R5 385 aa23.82■■□□□ 1.4
TMEM53-201ENST00000372235 PRDM10Q9NQV6 1147 aa23.82■■□□□ 1.4
TMEM53-201ENST00000372235 HDAC9Q9UKV0 1011 aa23.82■■□□□ 1.4
TMEM53-201ENST00000372235 UTYO14607 1347 aa23.82■■□□□ 1.4
TMEM53-201ENST00000372235 DACT2Q5SW24 774 aa23.81■■□□□ 1.4
TMEM53-201ENST00000372235 TTLL5Q6EMB2 1281 aa23.81■■□□□ 1.4
TMEM53-201ENST00000372235 TNS4Q8IZW8 715 aa23.81■■□□□ 1.4
TMEM53-201ENST00000372235 FBXW7Q969H0 707 aa23.81■■□□□ 1.4
TMEM53-201ENST00000372235 CNNM1Q9NRU3 951 aa23.81■■□□□ 1.4
TMEM53-201ENST00000372235 GGA3Q9NZ52 723 aa23.81■■□□□ 1.4
TMEM53-201ENST00000372235 EGFRP00533 1210 aa23.8■■□□□ 1.4
TMEM53-201ENST00000372235 SCARF1Q14162 830 aa23.8■■□□□ 1.4
TMEM53-201ENST00000372235 ZNF804AQ7Z570 1209 aa23.8■■□□□ 1.4
TMEM53-201ENST00000372235 FOXN1O15353 648 aa23.79■■□□□ 1.4
TMEM53-201ENST00000372235 CYP4F22Q6NT55 531 aa23.79■■□□□ 1.4
TMEM53-201ENST00000372235 SSH1Q8WYL5 1049 aa23.79■■□□□ 1.4
TMEM53-201ENST00000372235 CA12O43570 354 aa23.78■■□□□ 1.4
TMEM53-201ENST00000372235 GBA2Q9HCG7 927 aaPredicted RBP23.78■■□□□ 1.4
TMEM53-201ENST00000372235 CD209Q9NNX6 404 aa23.78■■□□□ 1.4
TMEM53-201ENST00000372235 HDAC5Q9UQL6 1122 aa23.78■■□□□ 1.4
TMEM53-201ENST00000372235 GRM1Q13255 1194 aa23.77■■□□□ 1.4
TMEM53-201ENST00000372235 ANGEL2Q5VTE6 544 aaKnown RBP23.77■■□□□ 1.4
TMEM53-201ENST00000372235 TXNRD3Q86VQ6 643 aa23.77■■□□□ 1.4
TMEM53-201ENST00000372235 TRMT2AQ8IZ69 625 aaKnown RBP23.77■■□□□ 1.4
TMEM53-201ENST00000372235 WTIPA6NIX2 430 aaPredicted RBP23.76■■□□□ 1.39
TMEM53-201ENST00000372235 NBPF7P0C2Y1 421 aaPredicted RBP23.76■■□□□ 1.39
TMEM53-201ENST00000372235 HUNKP57058 714 aa23.76■■□□□ 1.39
TMEM53-201ENST00000372235 FKBP1BP68106 108 aa23.76■■□□□ 1.39
TMEM53-201ENST00000372235 NOGQ13253 232 aa23.76■■□□□ 1.39
TMEM53-201ENST00000372235 EPHA10Q5JZY3 1008 aa23.76■■□□□ 1.39
TMEM53-201ENST00000372235 CCDC102AQ96A19 550 aa23.76■■□□□ 1.39
TMEM53-201ENST00000372235 SMC4Q9NTJ3 1288 aa23.76■■□□□ 1.39
TMEM53-201ENST00000372235 MROH5Q6ZUA9 1318 aa23.76■■□□□ 1.39
TMEM53-201ENST00000372235 THSD7BQ9C0I4 1608 aa23.76■■□□□ 1.39
TMEM53-201ENST00000372235 PCNTO95613 3336 aa23.75■■□□□ 1.39
TMEM53-201ENST00000372235 TAF5LO75529 589 aa23.75■■□□□ 1.39
TMEM53-201ENST00000372235 FKBP1AP62942 108 aaKnown RBP23.75■■□□□ 1.39
TMEM53-201ENST00000372235 GTF2IP78347 998 aa23.75■■□□□ 1.39
TMEM53-201ENST00000372235 UBE4AQ14139 1066 aa23.75■■□□□ 1.39
TMEM53-201ENST00000372235 RABL6Q3YEC7 729 aaPredicted RBP23.75■■□□□ 1.39
TMEM53-201ENST00000372235 SUCLG2Q96I99 432 aa23.75■■□□□ 1.39
TMEM53-201ENST00000372235 ADM5C9JUS6 153 aa23.74■■□□□ 1.39
TMEM53-201ENST00000372235 IL1R1P14778 569 aa23.74■■□□□ 1.39
TMEM53-201ENST00000372235 BRPF1P55201 1214 aaPredicted RBP23.74■■□□□ 1.39
TMEM53-201ENST00000372235 RGMBQ6NW40 437 aa23.73■■□□□ 1.39
TMEM53-201ENST00000372235 HELBQ8NG08 1087 aaPredicted RBP23.73■■□□□ 1.39
TMEM53-201ENST00000372235 CDCA7LQ96GN5 454 aa23.73■■□□□ 1.39
TMEM53-201ENST00000372235 ZNF594Q96JF6 807 aaPredicted RBP23.73■■□□□ 1.39
TMEM53-201ENST00000372235 PLIN1O60240 522 aa23.72■■□□□ 1.39
TMEM53-201ENST00000372235 KLRK1P26718 216 aa23.72■■□□□ 1.39
TMEM53-201ENST00000372235 NF2P35240 595 aa23.72■■□□□ 1.39
TMEM53-201ENST00000372235 CDCA5Q96FF9 252 aa23.72■■□□□ 1.39
TMEM53-201ENST00000372235 BICC1Q9H694 974 aaKnown RBP23.72■■□□□ 1.39
TMEM53-201ENST00000372235 IRS2Q9Y4H2 1338 aa23.71■■□□□ 1.39
TMEM53-201ENST00000372235 WNT10BO00744 389 aa23.71■■□□□ 1.39
TMEM53-201ENST00000372235 APOBEC3FQ8IUX4 373 aaKnown RBP23.71■■□□□ 1.39
TMEM53-201ENST00000372235 REM2Q8IYK8 340 aaPredicted RBP23.71■■□□□ 1.39
TMEM53-201ENST00000372235 KAZALD1Q96I82 304 aa23.71■■□□□ 1.39
TMEM53-201ENST00000372235 API5Q9BZZ5 524 aaKnown RBP23.71■■□□□ 1.39
TMEM53-201ENST00000372235 SASH1O94885 1247 aa23.7■■□□□ 1.38
TMEM53-201ENST00000372235 KIAA0825Q8IV33 1275 aa23.7■■□□□ 1.38
TMEM53-201ENST00000372235 USP44Q9H0E7 712 aa23.7■■□□□ 1.38
TMEM53-201ENST00000372235 POLR2AP24928 1970 aaKnown RBP23.69■■□□□ 1.38
TMEM53-201ENST00000372235 MYO1BO43795 1136 aa23.69■■□□□ 1.38
TMEM53-201ENST00000372235 LBX1P52954 281 aa23.69■■□□□ 1.38
TMEM53-201ENST00000372235 RIPOR2Q9Y4F9 1068 aa23.69■■□□□ 1.38
TMEM53-201ENST00000372235 AOC2O75106 756 aa23.68■■□□□ 1.38
TMEM53-201ENST00000372235 HSPA8P11142 646 aaKnown RBP23.68■■□□□ 1.38
TMEM53-201ENST00000372235 HIBADHP31937 336 aaKnown RBP23.68■■□□□ 1.38
TMEM53-201ENST00000372235 ZNF157P51786 506 aaPredicted RBP23.68■■□□□ 1.38
TMEM53-201ENST00000372235 DLGAP5Q15398 846 aa23.68■■□□□ 1.38
TMEM53-201ENST00000372235 NBPF9Q3BBW0 867 aa23.68■■□□□ 1.38
TMEM53-201ENST00000372235 MTMR14Q8NCE2 650 aa23.68■■□□□ 1.38
TMEM53-201ENST00000372235 MXD3Q9BW11 206 aa23.68■■□□□ 1.38
TMEM53-201ENST00000372235 ASTN2O75129 1339 aaPredicted RBP23.67■■□□□ 1.38
TMEM53-201ENST00000372235 KIF16BQ96L93 1317 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms