RNA–Protein interactions for RNA: ENST00000371437.4

NDUFA1-201, Transcript of NADH:ubiquinone oxidoreductase subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA1, Length 766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1-201ENST00000371437 USP17L3A6NCW0 530 aa23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 USP17L4A6NCW7 530 aa23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 TRPA1O75762 1119 aa23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 DDX58O95786 925 aaKnown RBP23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 USP17L8P0C7I0 530 aa23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 CCDC27Q2M243 656 aa23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 USP17L1Q7RTZ2 530 aa23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 PODNQ7Z5L7 613 aa23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 TTLL11Q8NHH1 800 aa23.58■■□□□ 1.37
NDUFA1-201ENST00000371437 LAMB1P07942 1786 aa23.57■■□□□ 1.36
NDUFA1-201ENST00000371437 TNRC18O15417 2968 aaPredicted RBP23.57■■□□□ 1.36
NDUFA1-201ENST00000371437 PI4KAP2A4QPH2 592 aa23.57■■□□□ 1.36
NDUFA1-201ENST00000371437 KSR2Q6VAB6 950 aa23.57■■□□□ 1.36
NDUFA1-201ENST00000371437 PI4KAP1Q8N8J0 262 aa23.57■■□□□ 1.36
NDUFA1-201ENST00000371437 YTHDC1Q96MU7 727 aaKnown RBP23.57■■□□□ 1.36
NDUFA1-201ENST00000371437 GREM2Q9H772 168 aa23.57■■□□□ 1.36
NDUFA1-201ENST00000371437 MINPP1Q9UNW1 487 aa23.57■■□□□ 1.36
NDUFA1-201ENST00000371437 MOB2Q70IA6 237 aa23.56■■□□□ 1.36
NDUFA1-201ENST00000371437 CDC5LQ99459 802 aaKnown RBP23.56■■□□□ 1.36
NDUFA1-201ENST00000371437 MXD3Q9BW11 206 aa23.56■■□□□ 1.36
NDUFA1-201ENST00000371437 FKBP1BP68106 108 aa23.55■■□□□ 1.36
NDUFA1-201ENST00000371437 CWF19L2Q2TBE0 894 aaKnown RBP23.55■■□□□ 1.36
NDUFA1-201ENST00000371437 DACT2Q5SW24 774 aa23.55■■□□□ 1.36
NDUFA1-201ENST00000371437 BSDC1Q9NW68 430 aaPredicted RBP23.55■■□□□ 1.36
NDUFA1-201ENST00000371437 SALL2Q9Y467 1007 aaPredicted RBP23.55■■□□□ 1.36
NDUFA1-201ENST00000371437 NEURL1BA8MQ27 555 aa23.54■■□□□ 1.36
NDUFA1-201ENST00000371437 NBPF9Q3BBW0 867 aa23.54■■□□□ 1.36
NDUFA1-201ENST00000371437 G2E3Q7L622 706 aa23.54■■□□□ 1.36
NDUFA1-201ENST00000371437 TSR2Q969E8 191 aaKnown RBP23.54■■□□□ 1.36
NDUFA1-201ENST00000371437 CCT4P50991 539 aaKnown RBP23.53■■□□□ 1.36
NDUFA1-201ENST00000371437 PRAMEF18Q5VWM3 479 aa23.53■■□□□ 1.36
NDUFA1-201ENST00000371437 TXNRD3Q86VQ6 643 aa23.53■■□□□ 1.36
NDUFA1-201ENST00000371437 ZBED9Q6R2W3 1325 aa23.53■■□□□ 1.36
NDUFA1-201ENST00000371437 PDE4DIPQ5VU43 2346 aa23.53■■□□□ 1.36
NDUFA1-201ENST00000371437 WWC1Q8IX03 1113 aa23.52■■□□□ 1.36
NDUFA1-201ENST00000371437 ZNF521Q96K83 1311 aa23.52■■□□□ 1.36
NDUFA1-201ENST00000371437 H7C1W4 665 aa23.51■■□□□ 1.35
NDUFA1-201ENST00000371437 KLRK1P26718 216 aa23.51■■□□□ 1.35
NDUFA1-201ENST00000371437 WNT10BO00744 389 aa23.5■■□□□ 1.35
NDUFA1-201ENST00000371437 REM2Q8IYK8 340 aaPredicted RBP23.5■■□□□ 1.35
NDUFA1-201ENST00000371437 UBE2Q2LH0YL09 131 aa23.49■■□□□ 1.35
NDUFA1-201ENST00000371437 CASP7P55210 303 aa23.49■■□□□ 1.35
NDUFA1-201ENST00000371437 STRIP1Q5VSL9 837 aa23.49■■□□□ 1.35
NDUFA1-201ENST00000371437 UBE3BQ7Z3V4 1068 aa23.49■■□□□ 1.35
NDUFA1-201ENST00000371437 PLA2G12BQ9BX93 195 aa23.49■■□□□ 1.35
NDUFA1-201ENST00000371437 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
NDUFA1-201ENST00000371437 COA1Q9GZY4 146 aa23.49■■□□□ 1.35
NDUFA1-201ENST00000371437 SOX10P56693 466 aa23.48■■□□□ 1.35
NDUFA1-201ENST00000371437 NEXNQ0ZGT2 675 aa23.48■■□□□ 1.35
NDUFA1-201ENST00000371437 CTU1Q7Z7A3 348 aaKnown RBP23.48■■□□□ 1.35
NDUFA1-201ENST00000371437 WDR63Q8IWG1 891 aa23.48■■□□□ 1.35
NDUFA1-201ENST00000371437 LEMD3Q9Y2U8 911 aa23.48■■□□□ 1.35
NDUFA1-201ENST00000371437 MYO3BQ8WXR4 1341 aa23.48■■□□□ 1.35
NDUFA1-201ENST00000371437 TWISTNBQ3B726 338 aaPredicted RBP23.47■■□□□ 1.35
NDUFA1-201ENST00000371437 STK31Q9BXU1 1019 aa23.47■■□□□ 1.35
NDUFA1-201ENST00000371437 ZNF804BA4D1E1 1349 aa23.46■■□□□ 1.35
NDUFA1-201ENST00000371437 SASH1O94885 1247 aa23.46■■□□□ 1.35
NDUFA1-201ENST00000371437 FBXW7Q969H0 707 aa23.46■■□□□ 1.35
NDUFA1-201ENST00000371437 ZBED3Q96IU2 234 aaPredicted RBP23.46■■□□□ 1.35
NDUFA1-201ENST00000371437 IRS2Q9Y4H2 1338 aa23.46■■□□□ 1.35
NDUFA1-201ENST00000371437 CSF1RP07333 972 aa23.45■■□□□ 1.34
NDUFA1-201ENST00000371437 ITGA6P23229 1130 aa23.45■■□□□ 1.34
NDUFA1-201ENST00000371437 IGHMBP2P38935 993 aaKnown RBP23.45■■□□□ 1.34
NDUFA1-201ENST00000371437 GCKRQ14397 625 aa23.45■■□□□ 1.34
NDUFA1-201ENST00000371437 SLC4A2P04920 1241 aa23.44■■□□□ 1.34
NDUFA1-201ENST00000371437 OTOFQ9HC10 1997 aa23.43■■□□□ 1.34
NDUFA1-201ENST00000371437 ARAP2Q8WZ64 1704 aa23.43■■□□□ 1.34
NDUFA1-201ENST00000371437 TBC1D8O95759 1140 aa23.43■■□□□ 1.34
NDUFA1-201ENST00000371437 TM4SF4P48230 202 aa23.43■■□□□ 1.34
NDUFA1-201ENST00000371437 FLIIQ13045 1269 aa23.43■■□□□ 1.34
NDUFA1-201ENST00000371437 OGFOD1Q8N543 542 aa23.43■■□□□ 1.34
NDUFA1-201ENST00000371437 ZNF296Q8WUU4 475 aaPredicted RBP23.43■■□□□ 1.34
NDUFA1-201ENST00000371437 SSC5DA1L4H1 1573 aa23.43■■□□□ 1.34
NDUFA1-201ENST00000371437 IL16Q14005 1332 aa23.42■■□□□ 1.34
NDUFA1-201ENST00000371437 TTLL5Q6EMB2 1281 aa23.42■■□□□ 1.34
NDUFA1-201ENST00000371437 KIAA0825Q8IV33 1275 aa23.42■■□□□ 1.34
NDUFA1-201ENST00000371437 HPS5Q9UPZ3 1129 aa23.42■■□□□ 1.34
NDUFA1-201ENST00000371437 COL1A1P02452 1464 aaPredicted RBP23.42■■□□□ 1.34
NDUFA1-201ENST00000371437 TTLL12Q14166 644 aaPredicted RBP23.41■■□□□ 1.34
NDUFA1-201ENST00000371437 ANKRD2Q9GZV1 360 aa23.41■■□□□ 1.34
NDUFA1-201ENST00000371437 SNAP23O00161 211 aa23.4■■□□□ 1.34
NDUFA1-201ENST00000371437 MMP14P50281 582 aa23.4■■□□□ 1.34
NDUFA1-201ENST00000371437 GTF2IP78347 998 aa23.4■■□□□ 1.34
NDUFA1-201ENST00000371437 PTPN12Q05209 780 aaKnown RBP23.4■■□□□ 1.34
NDUFA1-201ENST00000371437 CHRNDQ07001 517 aa23.4■■□□□ 1.34
NDUFA1-201ENST00000371437 MKRN3Q13064 507 aaKnown RBP23.4■■□□□ 1.34
NDUFA1-201ENST00000371437 DNAAF4Q8WXU2 420 aa23.4■■□□□ 1.34
NDUFA1-201ENST00000371437 CD209Q9NNX6 404 aa23.4■■□□□ 1.34
NDUFA1-201ENST00000371437 NOM1Q5C9Z4 860 aaKnown RBP23.39■■□□□ 1.33
NDUFA1-201ENST00000371437 APOBEC3FQ8IUX4 373 aaKnown RBP23.39■■□□□ 1.33
NDUFA1-201ENST00000371437 CERS5Q8N5B7 392 aa23.39■■□□□ 1.33
NDUFA1-201ENST00000371437 MPHOSPH8Q99549 860 aa23.39■■□□□ 1.33
NDUFA1-201ENST00000371437 FZD1Q9UP38 647 aa23.39■■□□□ 1.33
NDUFA1-201ENST00000371437 FANCIQ9NVI1 1328 aa23.38■■□□□ 1.33
NDUFA1-201ENST00000371437 NF2P35240 595 aa23.38■■□□□ 1.33
NDUFA1-201ENST00000371437 PRKG1Q13976 671 aa23.38■■□□□ 1.33
NDUFA1-201ENST00000371437 LDLRAD1Q5T700 205 aa23.38■■□□□ 1.33
NDUFA1-201ENST00000371437 LINS1Q8NG48 757 aa23.38■■□□□ 1.33
NDUFA1-201ENST00000371437 CFHR5Q9BXR6 569 aa23.38■■□□□ 1.33
NDUFA1-201ENST00000371437 R3HDMLQ9H3Y0 253 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms