RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CYP21A2P08686 494 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 FOSBP53539 338 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 RUFY2Q8WXA3 655 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 ALDH1L1O75891 902 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 FDPSP14324 419 aaKnown RBP13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 EVCP57679 992 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 TSPYL1Q9H0U9 437 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 ANO10Q9NW15 660 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 MRFAP1Q9Y605 127 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 TSPOAP1O95153 1857 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 NCAPD2Q15021 1401 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 KIAA1468Q9P260 1216 aa13.6□□□□□ -0.23
SMARCA1-201ENST00000371121 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 CTAGE5O15320 804 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 ZSCAN16Q9H4T2 348 aaPredicted RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 SUGCTQ9HAC7 445 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 RRP15Q9Y3B9 282 aaKnown RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 MROH7-TTC4A0A0A0MT08 1334 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 BECN2A8MW95 431 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 IRX3P78415 501 aaPredicted RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 PSD3Q9NYI0 1048 aa13.59□□□□□ -0.23
SMARCA1-201ENST00000371121 ATP8B1O43520 1251 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 CASQ1P31415 396 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 LRRFIP1Q32MZ4 808 aaKnown RBP13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 HDGFL1Q5TGJ6 251 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 UBXN4Q92575 508 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.23
SMARCA1-201ENST00000371121 ANKRD1Q15327 319 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 AACSQ86V21 672 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 FSIP1Q8NA03 581 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 CCDC150Q8NCX0 1101 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 CFAP45Q9UL16 551 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 PALLDQ8WX93 1383 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 PSMA5P28066 241 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 NCOA5Q9HCD5 579 aaKnown RBP13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 CLIC4Q9Y696 253 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 DIP2AQ14689 1571 aa13.58□□□□□ -0.24
SMARCA1-201ENST00000371121 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 PSME1Q06323 249 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 PROSER3Q2NL68 480 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 GOLGA5Q8TBA6 731 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 KLHDC4Q8TBB5 520 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 UTP14AQ9BVJ6 771 aaKnown RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 IRX2Q9BZI1 471 aaPredicted RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 SFPQP23246 707 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 TOGARAM2Q6ZUX3 1019 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 BIN1O00499 593 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 PFKFB2O60825 505 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 URI1O94763 535 aaPredicted RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 NAA16Q6N069 864 aaPredicted RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 CLASRPQ8N2M8 674 aaKnown RBP13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 DNAAF4Q8WXU2 420 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 PNKPQ96T60 521 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 SIL1Q9H173 461 aa13.57□□□□□ -0.24
SMARCA1-201ENST00000371121 SMC2O95347 1197 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 BMP6P22004 513 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 EXOC4Q96A65 974 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 AGXT2Q9BYV1 514 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 FLT4P35916 1363 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 LMOD1P29536 600 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 CDC27P30260 824 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 EIF4A1P60842 406 aaKnown RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 TPM4P67936 248 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 TBX2Q13207 712 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 CWF19L2Q2TBE0 894 aaKnown RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 YY1AP1Q9H869 796 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 SIPA1L3O60292 1781 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 HTATSF1O43719 755 aaKnown RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 FANCCQ00597 558 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 LONRF2Q1L5Z9 754 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 BEND6Q5SZJ8 279 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 LINC00301Q8NCQ3 95 aa13.56□□□□□ -0.24
SMARCA1-201ENST00000371121 PTPDC1A2A3K4 754 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 ISM2Q6H9L7 571 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 DHX58Q96C10 678 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 AKAP2Q9Y2D5 859 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 NEO1Q92859 1461 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 USP54Q70EL1 1684 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 ANKRD65E5RJM6 399 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 ACTN2P35609 894 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 GPR161Q8N6U8 529 aaKnown RBP13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 NEK1Q96PY6 1258 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 ADALQ6DHV7 355 aa13.55□□□□□ -0.24
SMARCA1-201ENST00000371121 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms