RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 MRC1P22897 1456 aa20.33■□□□□ 0.85
CHTOP-203ENST00000368690 TULP2O00295 520 aa20.33■□□□□ 0.85
CHTOP-203ENST00000368690 JAK2O60674 1132 aa20.33■□□□□ 0.85
CHTOP-203ENST00000368690 NOL10Q9BSC4 688 aaKnown RBP20.33■□□□□ 0.85
CHTOP-203ENST00000368690 FSD1Q9BTV5 496 aa20.33■□□□□ 0.85
CHTOP-203ENST00000368690 TRMT1Q9NXH9 659 aaKnown RBP20.33■□□□□ 0.85
CHTOP-203ENST00000368690 TAF5LO75529 589 aa20.32■□□□□ 0.84
CHTOP-203ENST00000368690 TCEANC2Q96MN5 208 aa20.32■□□□□ 0.84
CHTOP-203ENST00000368690 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHTOP-203ENST00000368690 V9GYY5 206 aaPredicted RBP20.32■□□□□ 0.84
CHTOP-203ENST00000368690 UTYO14607 1347 aa20.32■□□□□ 0.84
CHTOP-203ENST00000368690 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
CHTOP-203ENST00000368690 EIF2S2P20042 333 aaKnown RBP20.32■□□□□ 0.84
CHTOP-203ENST00000368690 IRX5P78411 483 aaPredicted RBP20.32■□□□□ 0.84
CHTOP-203ENST00000368690 STK3Q13188 491 aa20.32■□□□□ 0.84
CHTOP-203ENST00000368690 ZNF396Q96N95 335 aaPredicted RBP20.32■□□□□ 0.84
CHTOP-203ENST00000368690 NEK1Q96PY6 1258 aa20.32■□□□□ 0.84
CHTOP-203ENST00000368690 FHOD1Q9Y613 1164 aa20.32■□□□□ 0.84
CHTOP-203ENST00000368690 CCP110O43303 1012 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 NRDCO43847 1150 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 SASH1O94885 1247 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 E4F1Q66K89 784 aaPredicted RBP20.31■□□□□ 0.84
CHTOP-203ENST00000368690 NBPF11Q86T75 865 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 EAF2Q96CJ1 260 aaPredicted RBP20.31■□□□□ 0.84
CHTOP-203ENST00000368690 CARD10Q9BWT7 1032 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 TSPYL1Q9H0U9 437 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 C9orf78Q9NZ63 289 aaPredicted RBP20.31■□□□□ 0.84
CHTOP-203ENST00000368690 PPP1R13BQ96KQ4 1090 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 GOLPH3LQ9H4A5 285 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 TAF6LQ9Y6J9 622 aa20.31■□□□□ 0.84
CHTOP-203ENST00000368690 ATP8B1O43520 1251 aa20.3■□□□□ 0.84
CHTOP-203ENST00000368690 IL2RBP14784 551 aa20.3■□□□□ 0.84
CHTOP-203ENST00000368690 G3BP1Q13283 466 aaKnown RBP eCLIP20.3■□□□□ 0.84
CHTOP-203ENST00000368690 IFNL2Q8IZJ0 200 aa20.3■□□□□ 0.84
CHTOP-203ENST00000368690 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
CHTOP-203ENST00000368690 PA2G4Q9UQ80 394 aaKnown RBP20.3■□□□□ 0.84
CHTOP-203ENST00000368690 COL14A1Q05707 1796 aaKnown RBP20.3■□□□□ 0.84
CHTOP-203ENST00000368690 BTBD11A6QL63 1104 aa20.29■□□□□ 0.84
CHTOP-203ENST00000368690 PFKFB2O60825 505 aa20.29■□□□□ 0.84
CHTOP-203ENST00000368690 PHKG2P15735 406 aa20.29■□□□□ 0.84
CHTOP-203ENST00000368690 SRRTQ9BXP5 876 aaKnown RBP20.29■□□□□ 0.84
CHTOP-203ENST00000368690 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.29■□□□□ 0.84
CHTOP-203ENST00000368690 U3KPZ7 1027 aaPredicted RBP20.29■□□□□ 0.84
CHTOP-203ENST00000368690 CLCN6P51797 869 aa20.29■□□□□ 0.84
CHTOP-203ENST00000368690 AOPEPQ8N6M6 819 aa20.29■□□□□ 0.84
CHTOP-203ENST00000368690 DNAJC2Q99543 621 aaKnown RBP20.29■□□□□ 0.84
CHTOP-203ENST00000368690 ARGLU1Q9NWB6 273 aaPredicted RBP20.29■□□□□ 0.84
CHTOP-203ENST00000368690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.84
CHTOP-203ENST00000368690 PHLPP2Q6ZVD8 1323 aa20.28■□□□□ 0.84
CHTOP-203ENST00000368690 KSR2Q6VAB6 950 aa20.28■□□□□ 0.84
CHTOP-203ENST00000368690 ZNF589Q86UQ0 364 aaPredicted RBP20.28■□□□□ 0.84
CHTOP-203ENST00000368690 ZRANB2O95218 330 aaKnown RBP eCLIP20.28■□□□□ 0.842e-14■■■□□ 18.7
CHTOP-203ENST00000368690 HMGB1P09429 215 aaKnown RBP20.28■□□□□ 0.84
CHTOP-203ENST00000368690 PNMA6AP0CW24 399 aaPredicted RBP20.28■□□□□ 0.84
CHTOP-203ENST00000368690 ERCC6LQ2NKX8 1250 aa20.28■□□□□ 0.84
CHTOP-203ENST00000368690 Q6ZUG5 572 aa20.28■□□□□ 0.84
CHTOP-203ENST00000368690 CHMP4CQ96CF2 233 aa20.28■□□□□ 0.84
CHTOP-203ENST00000368690 OVOS2A0A0G2JMS6 1433 aa20.27■□□□□ 0.84
CHTOP-203ENST00000368690 CYP27B1O15528 508 aa20.27■□□□□ 0.84
CHTOP-203ENST00000368690 TPM1P09493 284 aa20.27■□□□□ 0.84
CHTOP-203ENST00000368690 CDK11BP21127 795 aaKnown RBP20.27■□□□□ 0.84
CHTOP-203ENST00000368690 A0A1W2PQ27 194 aa20.27■□□□□ 0.83
CHTOP-203ENST00000368690 A0A1W2PQ64 194 aa20.27■□□□□ 0.83
CHTOP-203ENST00000368690 A0A1W2PQD8 194 aa20.27■□□□□ 0.83
CHTOP-203ENST00000368690 SCRN1Q12765 414 aa20.27■□□□□ 0.83
CHTOP-203ENST00000368690 ZCRB1Q8TBF4 217 aaKnown RBP20.27■□□□□ 0.83
CHTOP-203ENST00000368690 DDX11Q96FC9 970 aa20.27■□□□□ 0.83
CHTOP-203ENST00000368690 BOLA2Q9H3K6 86 aa20.27■□□□□ 0.83
CHTOP-203ENST00000368690 MAP3K2Q9Y2U5 619 aa20.27■□□□□ 0.83
CHTOP-203ENST00000368690 PARP4Q9UKK3 1724 aaKnown RBP20.26■□□□□ 0.83
CHTOP-203ENST00000368690 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHTOP-203ENST00000368690 TEX35Q5T0J7 233 aa20.26■□□□□ 0.83
CHTOP-203ENST00000368690 FMR1NBQ8N0W7 255 aaPredicted RBP20.26■□□□□ 0.83
CHTOP-203ENST00000368690 NSUN7Q8NE18 718 aaKnown RBP20.26■□□□□ 0.83
CHTOP-203ENST00000368690 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.26■□□□□ 0.83
CHTOP-203ENST00000368690 HSP90B1P14625 803 aaKnown RBP20.25■□□□□ 0.83
CHTOP-203ENST00000368690 ARMCX5Q6P1M9 558 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 SYT10Q6XYQ8 523 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 FSIP1Q8NA03 581 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 USP28Q96RU2 1077 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 CCDC8Q9H0W5 538 aaPredicted RBP20.25■□□□□ 0.83
CHTOP-203ENST00000368690 ETF1P62495 437 aaKnown RBP20.25■□□□□ 0.83
CHTOP-203ENST00000368690 TPM4P67936 248 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 MRPS27Q92552 414 aaKnown RBP20.25■□□□□ 0.83
CHTOP-203ENST00000368690 ST7Q9NRC1 585 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 PCDH11XQ9BZA7 1347 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 PCDH11YQ9BZA8 1340 aa20.25■□□□□ 0.83
CHTOP-203ENST00000368690 GRM8O00222 908 aa20.24■□□□□ 0.83
CHTOP-203ENST00000368690 PLA2G4AP47712 749 aa20.24■□□□□ 0.83
CHTOP-203ENST00000368690 ADALQ6DHV7 355 aa20.24■□□□□ 0.83
CHTOP-203ENST00000368690 KCNQ3O43525 872 aa20.24■□□□□ 0.83
CHTOP-203ENST00000368690 ARHGAP29Q52LW3 1261 aa20.24■□□□□ 0.83
CHTOP-203ENST00000368690 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
CHTOP-203ENST00000368690 AGXT2Q9BYV1 514 aa20.24■□□□□ 0.83
CHTOP-203ENST00000368690 ORC3Q9UBD5 711 aaPredicted RBP20.24■□□□□ 0.83
CHTOP-203ENST00000368690 KDM6AO15550 1401 aaPredicted RBP20.24■□□□□ 0.83
CHTOP-203ENST00000368690 PKD1L3Q7Z443 1732 aa20.23■□□□□ 0.83
CHTOP-203ENST00000368690 SALL1Q9NSC2 1324 aa20.23■□□□□ 0.83
CHTOP-203ENST00000368690 ERICH4A6NGS2 130 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms