RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 MAGEB6Q8N7X4 407 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 CNNM3Q8NE01 707 aa9.83□□□□□ -0.84
PTPRK-206ENST00000368215 CUL4AQ13619 759 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 CCDC152Q4G0S7 254 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 MAP7D2Q96T17 732 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 ANKIB1Q9P2G1 1089 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 ARHGEF28Q8N1W1 1705 aaKnown RBP9.82□□□□□ -0.84
PTPRK-206ENST00000368215 SMTNL1A8MU46 457 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 IGKV5-2P06315 115 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 NOLC1Q14978 699 aaKnown RBP eCLIP9.82□□□□□ -0.843e-6■■■□□ 16.8
PTPRK-206ENST00000368215 C17orf53Q8N3J3 647 aaPredicted RBP9.82□□□□□ -0.84
PTPRK-206ENST00000368215 CDC5LQ99459 802 aaKnown RBP9.82□□□□□ -0.84
PTPRK-206ENST00000368215 ZKSCAN3Q9BRR0 538 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 NOL7Q9UMY1 257 aaKnown RBP9.82□□□□□ -0.84
PTPRK-206ENST00000368215 TAF5LO75529 589 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 MRPS27Q92552 414 aaKnown RBP9.82□□□□□ -0.84
PTPRK-206ENST00000368215 MAP4K1Q92918 833 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 COPRSQ9NQ92 184 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 TMEM131LA2VDJ0 1609 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 CCDC196A0A1B0GTZ2 297 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 IPO7O95373 1038 aaKnown RBP9.82□□□□□ -0.84
PTPRK-206ENST00000368215 SFPQP23246 707 aaKnown RBP eCLIP9.82□□□□□ -0.844e-7■□□□□ 11
PTPRK-206ENST00000368215 USP5P45974 858 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 IQCA1Q86XH1 822 aa9.82□□□□□ -0.84
PTPRK-206ENST00000368215 ANKARQ7Z5J8 1434 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 NEURL4Q96JN8 1562 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 A0A1B0GVL5 298 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 CYP27B1O15528 508 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 GPAA1O43292 621 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 EPB41L2O43491 1005 aaKnown RBP9.81□□□□□ -0.84
PTPRK-206ENST00000368215 TXLNAP40222 546 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 DZIP1Q86YF9 867 aaKnown RBP9.81□□□□□ -0.84
PTPRK-206ENST00000368215 LEO1Q8WVC0 666 aaPredicted RBP9.81□□□□□ -0.84
PTPRK-206ENST00000368215 RNF41Q9H4P4 317 aaPredicted RBP9.81□□□□□ -0.84
PTPRK-206ENST00000368215 B4E1Z4 1266 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 TNNT1P13805 278 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 WTAPQ15007 396 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 TMC6Q7Z403 805 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 AOPEPQ8N6M6 819 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 UTP14AQ9BVJ6 771 aaKnown RBP9.81□□□□□ -0.84
PTPRK-206ENST00000368215 JAG2Q9Y219 1238 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 PTPRUQ92729 1446 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 RRP9O43818 475 aaKnown RBP9.81□□□□□ -0.84
PTPRK-206ENST00000368215 PTGS1P23219 599 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 TCIRG1Q13488 830 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 FILIP1LQ4L180 1135 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 ATP10DQ9P241 1426 aa9.81□□□□□ -0.84
PTPRK-206ENST00000368215 SPTLC2O15270 562 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 LIG1P18858 919 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 PTPN12Q05209 780 aaKnown RBP9.8□□□□□ -0.84
PTPRK-206ENST00000368215 SLFNL1Q499Z3 407 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 CTCFLQ8NI51 663 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-206ENST00000368215 ERCC4Q92889 916 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-206ENST00000368215 MKNK2Q9HBH9 465 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 ASAP1Q9ULH1 1129 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 E7EWF7 191 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 MBD4O95243 580 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 SYKP43405 635 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 PTPN14Q15678 1187 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 ZNF771Q7L3S4 317 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-206ENST00000368215 MTERF4Q7Z6M4 381 aaKnown RBP9.8□□□□□ -0.84
PTPRK-206ENST00000368215 MAP2P11137 1827 aaKnown RBP9.8□□□□□ -0.84
PTPRK-206ENST00000368215 IKQ13123 557 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-206ENST00000368215 ERVV-2B6SEH9 535 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 ADORA1P30542 326 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 TTC6Q86TZ1 520 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 ANKRD18AQ8IVF6 992 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 APPBP2Q92624 585 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 HAUS7Q99871 368 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 MYL10Q9BUA6 226 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 ZDHHC9Q9Y397 364 aa9.8□□□□□ -0.84
PTPRK-206ENST00000368215 CBFA2T2O43439 604 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 CATIPQ7Z7H3 387 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 ADCY9O60503 1353 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 OFD1O75665 1012 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 PPFIBP1Q86W92 1011 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 KCNG4Q8TDN1 519 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 GTF3C6Q969F1 213 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 DACH1Q9UI36 760 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 CYP21A2P08686 494 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 RTN1Q16799 776 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 HS1BP3Q53T59 392 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 NBPF5PQ86XG9 351 aaPredicted RBP9.79□□□□□ -0.84
PTPRK-206ENST00000368215 IL25Q9H293 177 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 ARMT1Q9H993 441 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.79□□□□□ -0.841e-9■■□□□ 13.6
PTPRK-206ENST00000368215 AGLP35573 1532 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 HSPD1P10809 573 aaKnown RBP9.79□□□□□ -0.84
PTPRK-206ENST00000368215 DHX8Q14562 1220 aaKnown RBP9.79□□□□□ -0.84
PTPRK-206ENST00000368215 CCDC24Q8N4L8 307 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 CEP131Q9UPN4 1083 aa9.79□□□□□ -0.84
PTPRK-206ENST00000368215 PI16Q6UXB8 463 aa9.78□□□□□ -0.84
PTPRK-206ENST00000368215 TMX1Q9H3N1 280 aa9.78□□□□□ -0.84
PTPRK-206ENST00000368215 TSPY2A6NKD2 308 aa9.78□□□□□ -0.84
PTPRK-206ENST00000368215 LMOD1P29536 600 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-206ENST00000368215 NLRP5P59047 1200 aa9.78□□□□□ -0.84
PTPRK-206ENST00000368215 CCDC102BQ68D86 513 aa9.78□□□□□ -0.84
PTPRK-206ENST00000368215 CPLX3Q8WVH0 158 aa9.78□□□□□ -0.84
PTPRK-206ENST00000368215 SH3TC1Q8TE82 1336 aa9.78□□□□□ -0.84
PTPRK-206ENST00000368215 RIMBP3CA6NJZ7 1639 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms