RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 BRDTQ58F21 947 aaPredicted RBP17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 SIRT1Q96EB6 747 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 ADCY5O95622 1261 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 ATP2A2P16615 1042 aaKnown RBP17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 KRT2P35908 639 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 PLCB3Q01970 1234 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 NOS1P29475 1434 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 IL16Q14005 1332 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 FAM169AQ9Y6X4 670 aa17.8■□□□□ 0.44
NUCKS1-201ENST00000367142 IDI1Q13907 227 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 ZMYND15Q9H091 742 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 ZBTB21Q9ULJ3 1066 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 ECM2O94769 699 aaPredicted RBP17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 COPS6Q7L5N1 327 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 ABCC5O15440 1437 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 AKAP4Q5JQC9 854 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 MCM9Q9NXL9 1143 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 RIMBP2O15034 1052 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 PSMC4P43686 418 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 TTC14Q96N46 770 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 GDPD2Q9HCC8 539 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 RFX1P22670 979 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 GNA11P29992 359 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 TMOD4Q9NZQ9 345 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 SMC6Q96SB8 1091 aa17.79■□□□□ 0.44
NUCKS1-201ENST00000367142 SCAF11Q99590 1463 aaKnown RBP17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 LDHBP07195 334 aaKnown RBP17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 IL2RBP14784 551 aa17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 CEP135Q66GS9 1140 aa17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 MRPS27Q92552 414 aaKnown RBP17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 V9GYY5 206 aaPredicted RBP17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 CTAGE15A4D2H0 777 aa17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 CTAGE8P0CG41 777 aa17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 LMBR1LQ6UX01 489 aa17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 CTAGE6Q86UF2 777 aa17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 CTAGE4Q8IX94 777 aa17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 NSFL1CQ9UNZ2 370 aaKnown RBP17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 TRIM75PA6NK02 468 aa17.78■□□□□ 0.44
NUCKS1-201ENST00000367142 ZSCAN22P10073 491 aaPredicted RBP17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 CFAP58Q5T655 872 aa17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 TIGD1Q96MW7 591 aa17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 MAK16Q9BXY0 300 aaKnown RBP17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 PICK1Q9NRD5 415 aa17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 SLC8A3P57103 927 aa17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 CCDC171Q6TFL3 1326 aa17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 ANXA1P04083 346 aa17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 FMNL3Q8IVF7 1028 aa17.77■□□□□ 0.44
NUCKS1-201ENST00000367142 WDR7Q9Y4E6 1490 aa17.77■□□□□ 0.43
NUCKS1-201ENST00000367142 FAM83GA6ND36 823 aa17.77■□□□□ 0.43
NUCKS1-201ENST00000367142 KRT83P78385 493 aa17.77■□□□□ 0.43
NUCKS1-201ENST00000367142 GRM8O00222 908 aa17.77■□□□□ 0.43
NUCKS1-201ENST00000367142 PAG1Q9NWQ8 432 aa17.77■□□□□ 0.43
NUCKS1-201ENST00000367142 CCDC6Q16204 474 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 TSHZ3Q63HK5 1081 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 KSR2Q6VAB6 950 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 Q6ZUG5 572 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 NEK11Q8NG66 645 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 AKNAD1Q5T1N1 836 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 TTC6Q86TZ1 520 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 DHX58Q96C10 678 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 STK32BQ9NY57 414 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 CALCOCO1Q9P1Z2 691 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 PAXBP1Q9Y5B6 917 aa17.76■□□□□ 0.43
NUCKS1-201ENST00000367142 CBX1P83916 185 aa17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 BEGAINQ9BUH8 593 aa17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 GPHNQ9NQX3 736 aaPredicted RBP17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 HSPA4P34932 840 aa17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 ZSWIM4Q9H7M6 989 aa17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 RBM28Q9NW13 759 aaKnown RBP17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 RBM8AQ9Y5S9 174 aaKnown RBP17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 RRP9O43818 475 aaKnown RBP17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 SP4Q02446 784 aa17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 RNF113AO15541 343 aaKnown RBP17.75■□□□□ 0.43
NUCKS1-201ENST00000367142 GOLGA1Q92805 767 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 LRRC2Q9BYS8 371 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 WWC3Q9ULE0 1092 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 IRS4O14654 1257 aaPredicted RBP17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 ARID5AQ03989 594 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 MAGEB6Q8N7X4 407 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 PARP1P09874 1014 aaKnown RBP17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 WDR44Q5JSH3 913 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 LPXNO60711 386 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 TPD52P55327 224 aaPredicted RBP17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 SMC1BQ8NDV3 1235 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 C14orf93Q9H972 538 aaKnown RBP17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 OPA1O60313 960 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 SLC39A6Q13433 755 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
NUCKS1-201ENST00000367142 RPL13P26373 211 aaKnown RBP17.73■□□□□ 0.43
NUCKS1-201ENST00000367142 ALDH3A1P30838 453 aa17.73■□□□□ 0.43
NUCKS1-201ENST00000367142 TRAPPC3LQ5T215 181 aa17.73■□□□□ 0.43
NUCKS1-201ENST00000367142 CCDC129Q6ZRS4 1044 aa17.73■□□□□ 0.43
NUCKS1-201ENST00000367142 ZBTB16Q05516 673 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms