RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
PARP1-203ENST00000366794 ZSCAN25Q6NSZ9 544 aa16.53■□□□□ 0.24
PARP1-203ENST00000366794 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.24
PARP1-203ENST00000366794 ALG1Q9BT22 464 aa16.52■□□□□ 0.24
PARP1-203ENST00000366794 IARSP41252 1262 aaKnown RBP16.52■□□□□ 0.23
PARP1-203ENST00000366794 HMGN5P82970 282 aaKnown RBP16.52■□□□□ 0.23
PARP1-203ENST00000366794 PCDH11XQ9BZA7 1347 aa16.52■□□□□ 0.23
PARP1-203ENST00000366794 PCDH11YQ9BZA8 1340 aa16.52■□□□□ 0.23
PARP1-203ENST00000366794 GPAA1O43292 621 aa16.52■□□□□ 0.23
PARP1-203ENST00000366794 SLC5A1P13866 664 aa16.52■□□□□ 0.23
PARP1-203ENST00000366794 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 C8orf37Q96NL8 207 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 ARMT1Q9H993 441 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 WWC3Q9ULE0 1092 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 HMGB1P09429 215 aaKnown RBP16.51■□□□□ 0.23
PARP1-203ENST00000366794 CYP7A1P22680 504 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 LMOD1P29536 600 aaPredicted RBP16.51■□□□□ 0.23
PARP1-203ENST00000366794 AOPEPQ8N6M6 819 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 CPLX3Q8WVH0 158 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 ZSWIM6Q9HCJ5 1215 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 TPM2P07951 284 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 ATP5JP18859 108 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 MAP4K1Q92918 833 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 SLC4A4Q9Y6R1 1079 aa16.51■□□□□ 0.23
PARP1-203ENST00000366794 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
PARP1-203ENST00000366794 CLSTN1O94985 981 aa16.5■□□□□ 0.23
PARP1-203ENST00000366794 CTDSPL2Q05D32 466 aa16.5■□□□□ 0.23
PARP1-203ENST00000366794 LEO1Q8WVC0 666 aaPredicted RBP16.5■□□□□ 0.23
PARP1-203ENST00000366794 GREM2Q9H772 168 aa16.5■□□□□ 0.23
PARP1-203ENST00000366794 MBD4O95243 580 aa16.5■□□□□ 0.23
PARP1-203ENST00000366794 DDB1Q16531 1140 aa16.5■□□□□ 0.23
PARP1-203ENST00000366794 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
PARP1-203ENST00000366794 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
PARP1-203ENST00000366794 NR1I2O75469 434 aa16.5■□□□□ 0.23
PARP1-203ENST00000366794 NOLC1Q14978 699 aaKnown RBP eCLIP16.5■□□□□ 0.233e-9■■□□□ 12.2
PARP1-203ENST00000366794 GNL3LQ9NVN8 582 aaKnown RBP16.5■□□□□ 0.23
PARP1-203ENST00000366794 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
PARP1-203ENST00000366794 E7EWF7 191 aa16.49■□□□□ 0.23
PARP1-203ENST00000366794 CUL4AQ13619 759 aa16.49■□□□□ 0.23
PARP1-203ENST00000366794 ANKIB1Q9P2G1 1089 aa16.49■□□□□ 0.23
PARP1-203ENST00000366794 USP31Q70CQ4 1352 aa16.49■□□□□ 0.23
PARP1-203ENST00000366794 AOX1Q06278 1338 aa16.49■□□□□ 0.23
PARP1-203ENST00000366794 A0A0G2JLW4 131 aa16.49■□□□□ 0.23
PARP1-203ENST00000366794 SLC3A2P08195 630 aaKnown RBP16.49■□□□□ 0.23
PARP1-203ENST00000366794 FAM200AQ8TCP9 573 aa16.49■□□□□ 0.23
PARP1-203ENST00000366794 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
PARP1-203ENST00000366794 ADD1P35611 737 aaKnown RBP16.49■□□□□ 0.23
PARP1-203ENST00000366794 INCENPQ9NQS7 918 aa16.49■□□□□ 0.23
PARP1-203ENST00000366794 TMC6Q7Z403 805 aa16.48■□□□□ 0.23
PARP1-203ENST00000366794 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
PARP1-203ENST00000366794 ZBTB43O43298 467 aa16.48■□□□□ 0.23
PARP1-203ENST00000366794 MFSD6Q6ZSS7 791 aa16.48■□□□□ 0.23
PARP1-203ENST00000366794 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
PARP1-203ENST00000366794 CBX1P83916 185 aa16.48■□□□□ 0.23
PARP1-203ENST00000366794 VAT1LQ9HCJ6 419 aa16.48■□□□□ 0.23
PARP1-203ENST00000366794 CDC42BPGQ6DT37 1551 aa16.48■□□□□ 0.23
PARP1-203ENST00000366794 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
PARP1-203ENST00000366794 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
PARP1-203ENST00000366794 NBPF10Q6P3W6 841 aaKnown RBP16.47■□□□□ 0.23
PARP1-203ENST00000366794 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
PARP1-203ENST00000366794 USP28Q96RU2 1077 aa16.47■□□□□ 0.23
PARP1-203ENST00000366794 SCRN1Q12765 414 aa16.47■□□□□ 0.23
PARP1-203ENST00000366794 LRMPQ12912 555 aa16.47■□□□□ 0.23
PARP1-203ENST00000366794 COPRSQ9NQ92 184 aa16.47■□□□□ 0.23
PARP1-203ENST00000366794 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
PARP1-203ENST00000366794 TNNT1P13805 278 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 TCIRG1Q13488 830 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 COL9A3Q14050 684 aaPredicted RBP16.46■□□□□ 0.23
PARP1-203ENST00000366794 NECTIN1Q15223 517 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 HLFQ16534 295 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 JMYQ8N9B5 988 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 CCDC112Q8NEF3 446 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 RGS12O14924 1447 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 AFMP43652 599 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 BRINP3Q76B58 766 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 CNNM3Q8NE01 707 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 ANO10Q9NW15 660 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 FGAP02671 866 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 PHKA1P46020 1223 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 AMOTL1Q8IY63 956 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 AIFM3Q96NN9 605 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 SEC31BQ9NQW1 1179 aa16.46■□□□□ 0.23
PARP1-203ENST00000366794 XBP1P17861 261 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 CAVIN4Q5BKX8 364 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 OSBP2Q969R2 916 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
PARP1-203ENST00000366794 IGSF3O75054 1194 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 TFCP2L1Q9NZI6 479 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 SHPRHQ149N8 1683 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 ZPR1O75312 459 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 SSRP1Q08945 709 aaKnown RBP16.45■□□□□ 0.22
PARP1-203ENST00000366794 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 CDKL5O76039 1030 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 CBX8Q9HC52 389 aa16.45■□□□□ 0.22
PARP1-203ENST00000366794 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
PARP1-203ENST00000366794 USP5P45974 858 aa16.44■□□□□ 0.22
PARP1-203ENST00000366794 GTF3C6Q969F1 213 aa16.44■□□□□ 0.22
PARP1-203ENST00000366794 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
PARP1-203ENST00000366794 HAUS7Q99871 368 aa16.44■□□□□ 0.22
PARP1-203ENST00000366794 KCNJ14Q9UNX9 436 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms