RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 TXNDC11Q6PKC3 985 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 CEP120Q8N960 986 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 CCDC74AQ96AQ1 378 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 ZKSCAN3Q9BRR0 538 aa6.05□□□□□ -1.44
RNU4-1-201ENST00000363925 TREHO43280 583 aa6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 HOXD8P13378 290 aaPredicted RBP6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 LINC00114Q6XXX2 140 aa6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 GALNT12Q8IXK2 581 aa6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 ALKBH8Q96BT7 664 aaKnown RBP6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 TRIM11Q96F44 468 aa6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 HHIPQ96QV1 700 aa6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 DNAJC25Q9H1X3 360 aa6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 LIN7BQ9HAP6 207 aa6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 SH2B1Q9NRF2 756 aaPredicted RBP6.04□□□□□ -1.44
RNU4-1-201ENST00000363925 LINC01387J3KSC0 135 aa6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 APBA3O96018 575 aa6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 NID1P14543 1247 aa6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 HOXB4P17483 251 aaPredicted RBP6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 EPS8L3Q8TE67 593 aaKnown RBP6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 SLC7A3Q8WY07 619 aa6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 POP1Q99575 1024 aaKnown RBP6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 DZANK1Q9NVP4 752 aa6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 PPP4R2Q9NY27 417 aa6.03□□□□□ -1.44
RNU4-1-201ENST00000363925 A0A1W2PP55 124 aa6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 METTL12A8MUP2 240 aa6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 LDHBP07195 334 aaKnown RBP6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 P4HBP07237 508 aaKnown RBP6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 DSC3Q14574 896 aa6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 GRIK5Q16478 980 aa6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 EAPPQ56P03 285 aaPredicted RBP6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 TTC9Q92623 222 aa6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 PRDM6Q9NQX0 595 aa6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 WWC3Q9ULE0 1092 aa6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 PPME1Q9Y570 386 aa6.02□□□□□ -1.45
RNU4-1-201ENST00000363925 A0A0A0MRY4 1105 aa6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 MFAP1P55081 439 aaKnown RBP6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 RASSF7Q02833 373 aa6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 ENOX2Q16206 610 aaKnown RBP6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 PI16Q6UXB8 463 aa6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 TMEM151AQ8N4L1 468 aa6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 TMEM102Q8N9M5 508 aaPredicted RBP6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 SETDB2Q96T68 719 aa6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 CARD10Q9BWT7 1032 aa6.01□□□□□ -1.45
RNU4-1-201ENST00000363925 GDF11O95390 407 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 IGHA2P01877 340 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 ARL4DP49703 201 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 FCGRTP55899 365 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 FMR1Q06787 632 aaKnown RBP eCLIP6□□□□□ -1.45
RNU4-1-201ENST00000363925 GRIK4Q16099 956 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 SPRED3Q2MJR0 410 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 PEAR1Q5VY43 1037 aaPredicted RBP6□□□□□ -1.45
RNU4-1-201ENST00000363925 ALG1LQ6GMV1 187 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 CACTIN-AS1Q8N1I8 211 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 NXPE3Q969Y0 559 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 MUC3BQ9H195 1237 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 USP21Q9UK80 565 aa6□□□□□ -1.45
RNU4-1-201ENST00000363925 A0A096LPE4 126 aa5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 A0A1W2PPZ6 126 aa5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 EPHA1P21709 976 aa5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 COL8A1P27658 744 aa5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 XPCQ01831 940 aaPredicted RBP5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 IKBKEQ14164 716 aa5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 DTHD1Q6ZMT9 781 aa5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 BSNDQ8WZ55 320 aa5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 TRAK1Q9UPV9 953 aa5.99□□□□□ -1.45
RNU4-1-201ENST00000363925 H3BRJ5 948 aa5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 NFKBIEO00221 500 aa5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 SPATA31C1P0DKV0 1188 aa5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 BAG6P46379 1132 aa5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 COL9A3Q14050 684 aaPredicted RBP5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 KIAA0319Q5VV43 1072 aa5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 FMR1NBQ8N0W7 255 aaPredicted RBP5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 BCO2Q9BYV7 579 aa5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 SPG7Q9UQ90 795 aa5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 AKAP2Q9Y2D5 859 aa5.98□□□□□ -1.45
RNU4-1-201ENST00000363925 FSCN2O14926 492 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 GRIA4P48058 902 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 ZNF157P51786 506 aaPredicted RBP5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 FGD1P98174 961 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 KCNMA1Q12791 1236 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 GRM2Q14416 872 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 NXPE4Q6UWF7 544 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 ADAMTSL4Q6UY14 1074 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 CCNJLQ8IV13 435 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 DCAF5Q96JK2 942 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 NACC1Q96RE7 527 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 TCF12Q99081 682 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 DUSP9Q99956 384 aaKnown RBP5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 BCL2L13Q9BXK5 485 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 SEC31BQ9NQW1 1179 aa5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 GPN3Q9UHW5 284 aaPredicted RBP5.97□□□□□ -1.45
RNU4-1-201ENST00000363925 ELNP15502 786 aa5.96□□□□□ -1.46
RNU4-1-201ENST00000363925 ERCC3P19447 782 aa5.96□□□□□ -1.46
RNU4-1-201ENST00000363925 NLRP12P59046 1061 aa5.96□□□□□ -1.46
RNU4-1-201ENST00000363925 GSTM4Q03013 218 aa5.96□□□□□ -1.46
RNU4-1-201ENST00000363925 PCDH1Q08174 1060 aa5.96□□□□□ -1.46
RNU4-1-201ENST00000363925 SHISA2Q6UWI4 295 aa5.96□□□□□ -1.46
RNU4-1-201ENST00000363925 DNAJC14Q6Y2X3 702 aaPredicted RBP5.96□□□□□ -1.46
RNU4-1-201ENST00000363925 NPAS4Q8IUM7 802 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms