RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 CCDC186Q7Z3E2 898 aa18.28■□□□□ 0.52
CNKSR1-201ENST00000361530 FAM177BA6PVY3 158 aa18.28■□□□□ 0.52
CNKSR1-201ENST00000361530 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-201ENST00000361530 NAA16Q6N069 864 aaPredicted RBP18.28■□□□□ 0.52
CNKSR1-201ENST00000361530 TDRD7Q8NHU6 1098 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-201ENST00000361530 NAP1L2Q9ULW6 460 aaPredicted RBP18.28■□□□□ 0.52
CNKSR1-201ENST00000361530 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.52
CNKSR1-201ENST00000361530 M0R2C6 588 aa18.27■□□□□ 0.52
CNKSR1-201ENST00000361530 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
CNKSR1-201ENST00000361530 GUCY1B3Q02153 619 aa18.27■□□□□ 0.52
CNKSR1-201ENST00000361530 LRMPQ12912 555 aa18.27■□□□□ 0.52
CNKSR1-201ENST00000361530 RCOR1Q9UKL0 485 aa18.27■□□□□ 0.52
CNKSR1-201ENST00000361530 SPATA31A3Q5VYP0 1347 aa18.27■□□□□ 0.52
CNKSR1-201ENST00000361530 PDIA3P30101 505 aaKnown RBP18.27■□□□□ 0.51
CNKSR1-201ENST00000361530 ZNF75DP51815 510 aa18.27■□□□□ 0.51
CNKSR1-201ENST00000361530 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.51
CNKSR1-201ENST00000361530 OSBP2Q969R2 916 aa18.27■□□□□ 0.51
CNKSR1-201ENST00000361530 USP28Q96RU2 1077 aa18.27■□□□□ 0.51
CNKSR1-201ENST00000361530 TRIM5Q9C035 493 aa18.27■□□□□ 0.51
CNKSR1-201ENST00000361530 GOLPH3LQ9H4A5 285 aa18.27■□□□□ 0.51
CNKSR1-201ENST00000361530 GPHNQ9NQX3 736 aaPredicted RBP18.27■□□□□ 0.51
CNKSR1-201ENST00000361530 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.26■□□□□ 0.51
CNKSR1-201ENST00000361530 SMAP1Q8IYB5 467 aaPredicted RBP18.26■□□□□ 0.51
CNKSR1-201ENST00000361530 CCDC191Q8NCU4 936 aa18.26■□□□□ 0.51
CNKSR1-201ENST00000361530 ZCRB1Q8TBF4 217 aaKnown RBP18.26■□□□□ 0.51
CNKSR1-201ENST00000361530 CCDC94Q9BW85 323 aaPredicted RBP18.26■□□□□ 0.51
CNKSR1-201ENST00000361530 LAMB4A4D0S4 1761 aa18.26■□□□□ 0.51
CNKSR1-201ENST00000361530 CCAR1Q8IX12 1150 aaKnown RBP18.26■□□□□ 0.51
CNKSR1-201ENST00000361530 SALL1Q9NSC2 1324 aa18.26■□□□□ 0.51
CNKSR1-201ENST00000361530 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
CNKSR1-201ENST00000361530 GTF2F1P35269 517 aaKnown RBP eCLIP18.25■□□□□ 0.51
CNKSR1-201ENST00000361530 ILDR1Q86SU0 546 aaPredicted RBP18.25■□□□□ 0.51
CNKSR1-201ENST00000361530 DRC7Q8IY82 874 aa18.25■□□□□ 0.51
CNKSR1-201ENST00000361530 ZNF710Q8N1W2 664 aa18.25■□□□□ 0.51
CNKSR1-201ENST00000361530 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
CNKSR1-201ENST00000361530 TJP1Q07157 1748 aa18.25■□□□□ 0.51
CNKSR1-201ENST00000361530 A0A087WWV3 80 aa18.24■□□□□ 0.51
CNKSR1-201ENST00000361530 ADORA1P30542 326 aa18.24■□□□□ 0.51
CNKSR1-201ENST00000361530 SNW1Q13573 536 aaKnown RBP18.24■□□□□ 0.51
CNKSR1-201ENST00000361530 CPDO75976 1380 aa18.24■□□□□ 0.51
CNKSR1-201ENST00000361530 FOXP2O15409 715 aa18.24■□□□□ 0.51
CNKSR1-201ENST00000361530 FDPSP14324 419 aaKnown RBP18.24■□□□□ 0.51
CNKSR1-201ENST00000361530 C11orf57Q6ZUT1 292 aaPredicted RBP18.24■□□□□ 0.51
CNKSR1-201ENST00000361530 CIAO1O76071 339 aa18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 IQCB1Q15051 598 aa18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 TOM1L2Q6ZVM7 507 aa18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 ZNF274Q96GC6 653 aaPredicted RBP18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 CCDC85AQ96PX6 553 aaPredicted RBP18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 NUP188Q5SRE5 1749 aa18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 HAND2P61296 217 aa18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 CEP126Q9P2H0 1117 aa18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
CNKSR1-201ENST00000361530 ERVV-2B6SEH9 535 aa18.22■□□□□ 0.51
CNKSR1-201ENST00000361530 SCARF1Q14162 830 aa18.22■□□□□ 0.51
CNKSR1-201ENST00000361530 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
CNKSR1-201ENST00000361530 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
CNKSR1-201ENST00000361530 KCPQ6ZWJ8 1503 aa18.22■□□□□ 0.51
CNKSR1-201ENST00000361530 CCDC144BQ3MJ40 725 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 OTUD7BQ6GQQ9 843 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 TICAM2Q86XR7 235 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 ENGASEQ8NFI3 743 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 KIF3AQ9Y496 699 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 XAGE2Q96GT9 111 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 ISCA1Q9BUE6 129 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 ZNF330Q9Y3S2 320 aaPredicted RBP18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 WDR17Q8IZU2 1322 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 CARMIL3Q8ND23 1372 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 STRCP1A6NGW2 1772 aa18.21■□□□□ 0.51
CNKSR1-201ENST00000361530 RIOK3O14730 519 aaKnown RBP18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 CBX1P83916 185 aa18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 WASHC4Q2M389 1173 aa18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 CLIP2Q9UDT6 1046 aa18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 PI16Q6UXB8 463 aa18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 CACTINQ8WUQ7 758 aaKnown RBP18.2■□□□□ 0.5
CNKSR1-201ENST00000361530 FGAP02671 866 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 ME1P48163 572 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 TTC39AQ5SRH9 613 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 ZNF396Q96N95 335 aaPredicted RBP18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 DCCP43146 1447 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 EVCP57679 992 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 CCDC158Q5M9N0 1113 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 CCDC73Q6ZRK6 1079 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 FSIP1Q8NA03 581 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 FAM89AQ96GI7 184 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 MYH15Q9Y2K3 1946 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 CAVIN2O95810 425 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 FAM160A1Q05DH4 1040 aa18.19■□□□□ 0.5
CNKSR1-201ENST00000361530 TCIRG1Q13488 830 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms