RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 WDR78Q5VTH9 848 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 TCP11L2Q8N4U5 519 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 GIMAP4Q9NUV9 329 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 RPAINQ86UA6 219 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 RHOXF2BP0C7M4 288 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 RHOXF2Q9BQY4 288 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 HCLS1P14317 486 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 CAVIN4Q5BKX8 364 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 NEK11Q8NG66 645 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 MINDY4BA8MYZ0 360 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 KLHDC4Q8TBB5 520 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 CNGA4Q8IV77 575 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 BAG1Q99933 345 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 PPP2R3AQ06190 1150 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 PNMA8AQ86V59 439 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 MAP3K12Q12852 859 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 RUFY4Q6ZNE9 571 aa9.46□□□□□ -0.9
NCKAP1-202ENST00000361354 ZC3H6P61129 1189 aaKnown RBP9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 GABPB1Q06547 395 aaPredicted RBP9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 MX2P20592 715 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 HS1BP3Q53T59 392 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 RASEFQ8IZ41 740 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 TRIM68Q6AZZ1 485 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 ABCF2Q9UG63 623 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 CA8P35219 290 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 KCNG4Q8TDN1 519 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 CCDC88BA6NC98 1476 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 RLBP1P12271 317 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 PEX19P40855 299 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 TLDC2A0PJX2 215 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 HIP1RO75146 1068 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 RAD54L2Q9Y4B4 1467 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 TUBB2AQ13885 445 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 TUBB2BQ9BVA1 445 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 HMG20BQ9P0W2 317 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 VSIG1Q86XK7 387 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 PPP4R1Q8TF05 950 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 ADAMTS8Q9UP79 889 aa9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
NCKAP1-202ENST00000361354 LRRC23Q53EV4 343 aaPredicted RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 UBL4BQ8N7F7 174 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 PTGS1P23219 599 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 RASA3Q14644 834 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 EXOSC9Q06265 439 aaKnown RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 ANO6Q4KMQ2 910 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 GUCA1BQ9UMX6 200 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 NOC2LQ9Y3T9 749 aaKnown RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 GJB2P29033 226 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 ORC6Q9Y5N6 252 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 LRRD1A4D1F6 860 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 ZNF444Q8N0Y2 327 aaPredicted RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 PHF23Q9BUL5 403 aaPredicted RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 KIFC2Q96AC6 838 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 PPANQ9NQ55 473 aaKnown RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 STAG1Q8WVM7 1258 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 FAM13AO94988 1023 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 ZKSCAN5Q9Y2L8 839 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 MAN1A2O60476 641 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 C8orf74Q6P047 294 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 SPATS2Q86XZ4 545 aaKnown RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 MYL6BP14649 208 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 IFT20Q8IY31 132 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 PPFIA3O75145 1194 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 MCM10Q7L590 875 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 CCDC124Q96CT7 223 aaKnown RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 ZNF213O14771 459 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 AGTPBP1Q9UPW5 1226 aa9.44□□□□□ -0.9
NCKAP1-202ENST00000361354 SSFA2P28290 1259 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 RRAGBQ5VZM2 374 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 ARID5AQ03989 594 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 TRIM60Q495X7 471 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 AFG3L2Q9Y4W6 797 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 IFIT3O14879 490 aaKnown RBP9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 PDZD8Q8NEN9 1154 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 APOEP02649 317 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 GUCY1B3Q02153 619 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 SATB2Q9UPW6 733 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 ZNF652Q9Y2D9 606 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 NACADO15069 1562 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 BCAR3O75815 825 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 CABP4P57796 275 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 NCBP1Q09161 790 aaKnown RBP9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 METAP2P50579 478 aaKnown RBP eCLIP9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 ANKRD20A3Q5VUR7 823 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 SCINQ9Y6U3 715 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 FAM204AQ9H8W3 233 aa9.43□□□□□ -0.9
NCKAP1-202ENST00000361354 MTMR3Q13615 1198 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 CCDC122Q5T0U0 273 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 CABS1Q96KC9 395 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 GOLGA6BA6NDN3 693 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 DENND2CQ68D51 928 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms