RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CABP4P57796 275 aa18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 HLTFQ14527 1009 aaKnown RBP eCLIP18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 DNAJC21Q5F1R6 531 aaKnown RBP18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 KSR2Q6VAB6 950 aa18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 TMEM87AQ8NBN3 555 aa18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 NAA30Q147X3 362 aaPredicted RBP18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 GUCA1BQ9UMX6 200 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 EFCAB8A8MWE9 144 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 AKR1B15C9JRZ8 316 aaPredicted RBP18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 AFAP1L1Q8TED9 768 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 NPATQ14207 1427 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 OPA1O60313 960 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 NF2P35240 595 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 TMEM67Q5HYA8 995 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 FAM76AQ8TAV0 307 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 STX17P56962 302 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 CWF19L2Q2TBE0 894 aaKnown RBP18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 MAATS1Q7Z4T9 603 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 ALS2CR12Q96Q35 445 aa18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 NCOA5Q9HCD5 579 aaKnown RBP18.24■□□□□ 0.51
CLSTN1-201ENST00000361311 ZNF202O95125 648 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 DDIT3P35638 169 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 NLRP12P59046 1061 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 SPAG1Q07617 926 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 CTCFLQ8NI51 663 aaPredicted RBP18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 ATRIPQ8WXE1 791 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 CAPZA3Q96KX2 299 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 PSDA5PKW4 1024 aaPredicted RBP18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 PRC1O43663 620 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 NAA16Q6N069 864 aaPredicted RBP18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 NAA15Q9BXJ9 866 aaKnown RBP18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 STAP2Q9UGK3 403 aa18.23■□□□□ 0.51
CLSTN1-201ENST00000361311 CDC25BP30305 580 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 METTL24Q5JXM2 366 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 CACNA2D4Q7Z3S7 1137 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 LINS1Q8NG48 757 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 KIF6Q6ZMV9 814 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 KIAA0232Q92628 1395 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 ABCC1P33527 1531 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 ATP5J2-PTCD1G3V325 749 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 RAD21O60216 631 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 PTCD1O75127 700 aaKnown RBP18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 CYLC1P35663 651 aaPredicted RBP18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 MTIF2P46199 727 aaKnown RBP18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 HNRNPH2P55795 449 aaKnown RBP18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 KIAA1468Q9P260 1216 aa18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 MKRN1Q9UHC7 482 aaKnown RBP18.22■□□□□ 0.51
CLSTN1-201ENST00000361311 ZBTB43O43298 467 aa18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 OTUD7BQ6GQQ9 843 aa18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 TDRD12Q587J7 1177 aaKnown RBP18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 RRAGBQ5VZM2 374 aa18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 SSH3Q8TE77 659 aa18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 TRIM21P19474 475 aaKnown RBP18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 ANO1Q5XXA6 986 aa18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 USP28Q96RU2 1077 aa18.21■□□□□ 0.51
CLSTN1-201ENST00000361311 ZEB2O60315 1214 aa18.21■□□□□ 0.5
CLSTN1-201ENST00000361311 IFFO1Q0D2I5 559 aa18.21■□□□□ 0.5
CLSTN1-201ENST00000361311 BRD3Q15059 726 aa18.21■□□□□ 0.5
CLSTN1-201ENST00000361311 CCDC129Q6ZRS4 1044 aa18.21■□□□□ 0.5
CLSTN1-201ENST00000361311 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 CLCN6P51797 869 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 CNGA4Q8IV77 575 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 GOLGA5Q8TBA6 731 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 ATP2C2O75185 946 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 MTX1Q13505 466 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 PPP1R13BQ96KQ4 1090 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 USP44Q9H0E7 712 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 SPECC1Q5M775 1068 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 GBP6Q6ZN66 633 aa18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 NAPGQ99747 312 aaPredicted RBP18.2■□□□□ 0.5
CLSTN1-201ENST00000361311 KRT86O43790 486 aa18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 SEC31AO94979 1220 aaKnown RBP18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 TUBB2AQ13885 445 aa18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 IGSF22Q8N9C0 903 aa18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 TUBB2BQ9BVA1 445 aa18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 AKR1B10O60218 316 aa18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 KRT18P05783 430 aaKnown RBP18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 CEP57Q86XR8 500 aa18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 DHX58Q96C10 678 aa18.19■□□□□ 0.5
CLSTN1-201ENST00000361311 MINDY4BA8MYZ0 360 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 C11orf57Q6ZUT1 292 aaPredicted RBP18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 GBP2P32456 591 aaPredicted RBP18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 EYA1Q99502 592 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 PAG1Q9NWQ8 432 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 NCOA3Q9Y6Q9 1424 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 ZHX3Q9H4I2 956 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 NFE2L3Q9Y4A8 694 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 ATP8B1O43520 1251 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 CCDC96Q2M329 555 aa18.18■□□□□ 0.5
CLSTN1-201ENST00000361311 CCDC178Q5BJE1 867 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms