RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CHGBP05060 677 aa21.77■■□□□ 1.08
PDLIM7-203ENST00000359895 SYT1P21579 422 aa21.77■■□□□ 1.08
PDLIM7-203ENST00000359895 GJB2P29033 226 aa21.77■■□□□ 1.08
PDLIM7-203ENST00000359895 TOB2Q14106 344 aaPredicted RBP21.77■■□□□ 1.08
PDLIM7-203ENST00000359895 RGL2O15211 777 aa21.76■■□□□ 1.07
PDLIM7-203ENST00000359895 XRCC6P12956 609 aaKnown RBP eCLIP21.76■■□□□ 1.07
PDLIM7-203ENST00000359895 NCLP19338 710 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-203ENST00000359895 TTF1Q15361 905 aaPredicted RBP21.76■■□□□ 1.07
PDLIM7-203ENST00000359895 FAM98CQ17RN3 349 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-203ENST00000359895 ZSCAN25Q6NSZ9 544 aa21.76■■□□□ 1.07
PDLIM7-203ENST00000359895 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.76■■□□□ 1.073e-7■■■□□ 15.9
PDLIM7-203ENST00000359895 GRPEL1Q9HAV7 217 aa21.76■■□□□ 1.07
PDLIM7-203ENST00000359895 TAF6LQ9Y6J9 622 aa21.76■■□□□ 1.07
PDLIM7-203ENST00000359895 UQCRFS1P1P0C7P4 283 aa21.75■■□□□ 1.07
PDLIM7-203ENST00000359895 HSPD1P10809 573 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-203ENST00000359895 PDCP20941 246 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 ZAP70P43403 619 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 ZNF445P59923 1031 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 ST3GAL1Q11201 340 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 PUM3Q15397 648 aaKnown RBP21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 CCDC152Q4G0S7 254 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 CLEC4GQ6UXB4 293 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 APPBP2Q92624 585 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 CTNNA3Q9UI47 895 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 BRPF3Q9ULD4 1205 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 KCNQ2O43526 872 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 F13A1P00488 732 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 RXRBP28702 533 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 CAVIN1Q6NZI2 390 aaKnown RBP21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 LPIN2Q92539 896 aa21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 GJD4Q96KN9 370 aaPredicted RBP21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 NIP7Q9Y221 180 aaKnown RBP eCLIP21.74■■□□□ 1.07
PDLIM7-203ENST00000359895 M0R2C6 588 aa21.73■■□□□ 1.07
PDLIM7-203ENST00000359895 SCARF1Q14162 830 aa21.73■■□□□ 1.07
PDLIM7-203ENST00000359895 NECAB1Q8N987 351 aa21.73■■□□□ 1.07
PDLIM7-203ENST00000359895 TMEM87AQ8NBN3 555 aa21.73■■□□□ 1.07
PDLIM7-203ENST00000359895 GPT2Q8TD30 523 aa21.73■■□□□ 1.07
PDLIM7-203ENST00000359895 SCN7AQ01118 1682 aa21.73■■□□□ 1.07
PDLIM7-203ENST00000359895 NHSQ6T4R5 1651 aa21.73■■□□□ 1.07
PDLIM7-203ENST00000359895 THSD7AQ9UPZ6 1657 aa21.73■■□□□ 1.07
PDLIM7-203ENST00000359895 CASZ1Q86V15 1759 aa21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 BTAF1O14981 1849 aa21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 NTSR2O95665 410 aa21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 HCLS1P14317 486 aaPredicted RBP21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 ARID4AP29374 1257 aaPredicted RBP21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 WASHC4Q2M389 1173 aa21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 DHX32Q7L7V1 743 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 OSBP2Q969R2 916 aa21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 CNTNAP4Q9C0A0 1308 aa21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 MYO5AQ9Y4I1 1855 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-203ENST00000359895 DOCK2Q92608 1830 aa21.71■■□□□ 1.07
PDLIM7-203ENST00000359895 SLC5A1P13866 664 aa21.71■■□□□ 1.07
PDLIM7-203ENST00000359895 FGFR2P21802 821 aa21.71■■□□□ 1.07
PDLIM7-203ENST00000359895 MCAMP43121 646 aa21.71■■□□□ 1.07
PDLIM7-203ENST00000359895 RBM6P78332 1123 aaKnown RBP21.71■■□□□ 1.07
PDLIM7-203ENST00000359895 Q6ZUG5 572 aa21.71■■□□□ 1.07
PDLIM7-203ENST00000359895 TCEANC2Q96MN5 208 aa21.71■■□□□ 1.07
PDLIM7-203ENST00000359895 MPHOSPH8Q99549 860 aa21.71■■□□□ 1.07
PDLIM7-203ENST00000359895 CSPP1Q1MSJ5 1256 aa21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 SLFNL1Q499Z3 407 aa21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 MTMR6Q9Y217 621 aa21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 IGHMBP2P38935 993 aaKnown RBP21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 COL9A3Q14050 684 aaPredicted RBP21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 ZSCAN23Q3MJ62 389 aa21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 STOX1Q6ZVD7 989 aa21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 GAS2L3Q86XJ1 694 aa21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 SYAP1Q96A49 352 aaPredicted RBP21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 CHAMP1Q96JM3 812 aa21.7■■□□□ 1.06
PDLIM7-203ENST00000359895 BRWD3Q6RI45 1802 aa21.69■■□□□ 1.06
PDLIM7-203ENST00000359895 LARP1BQ659C4 914 aaKnown RBP21.69■■□□□ 1.06
PDLIM7-203ENST00000359895 CCDC102BQ68D86 513 aa21.69■■□□□ 1.06
PDLIM7-203ENST00000359895 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
PDLIM7-203ENST00000359895 GTF3C6Q969F1 213 aa21.69■■□□□ 1.06
PDLIM7-203ENST00000359895 CHMP4CQ96CF2 233 aa21.69■■□□□ 1.06
PDLIM7-203ENST00000359895 FAM177BA6PVY3 158 aa21.68■■□□□ 1.06
PDLIM7-203ENST00000359895 E7EWF7 191 aa21.68■■□□□ 1.06
PDLIM7-203ENST00000359895 ADD2P35612 726 aa21.68■■□□□ 1.06
PDLIM7-203ENST00000359895 FGD1P98174 961 aa21.68■■□□□ 1.06
PDLIM7-203ENST00000359895 A0A1B0GUL6 1792 aa21.67■■□□□ 1.06
PDLIM7-203ENST00000359895 EXOSC10Q01780 885 aaKnown RBP21.67■■□□□ 1.06
PDLIM7-203ENST00000359895 UBE3CQ15386 1083 aa21.67■■□□□ 1.06
PDLIM7-203ENST00000359895 IMMTQ16891 758 aaKnown RBP21.67■■□□□ 1.06
PDLIM7-203ENST00000359895 RC3H1Q5TC82 1133 aaKnown RBP21.67■■□□□ 1.06
PDLIM7-203ENST00000359895 USP48Q86UV5 1035 aa21.67■■□□□ 1.06
PDLIM7-203ENST00000359895 PI16Q6UXB8 463 aa21.66■■□□□ 1.06
PDLIM7-203ENST00000359895 LLPHQ9BRT6 129 aaKnown RBP21.66■■□□□ 1.06
PDLIM7-203ENST00000359895 AGXT2Q9BYV1 514 aa21.66■■□□□ 1.06
PDLIM7-203ENST00000359895 VPS37CA5D8V6 355 aaPredicted RBP21.65■■□□□ 1.06
PDLIM7-203ENST00000359895 PHKA1P46020 1223 aa21.65■■□□□ 1.06
PDLIM7-203ENST00000359895 FBXL16Q8N461 479 aa21.65■■□□□ 1.06
PDLIM7-203ENST00000359895 CDC5LQ99459 802 aaKnown RBP21.65■■□□□ 1.06
PDLIM7-203ENST00000359895 PFKFB2O60825 505 aa21.65■■□□□ 1.06
PDLIM7-203ENST00000359895 BRF1Q92994 677 aa21.65■■□□□ 1.06
PDLIM7-203ENST00000359895 PUS7LQ9H0K6 701 aaKnown RBP21.65■■□□□ 1.06
PDLIM7-203ENST00000359895 SEC31BQ9NQW1 1179 aa21.65■■□□□ 1.06
PDLIM7-203ENST00000359895 TAF1LQ8IZX4 1826 aa21.64■■□□□ 1.06
PDLIM7-203ENST00000359895 LY75O60449 1722 aa21.64■■□□□ 1.06
PDLIM7-203ENST00000359895 COL24A1Q17RW2 1714 aa21.64■■□□□ 1.06
PDLIM7-203ENST00000359895 GPAA1O43292 621 aa21.64■■□□□ 1.05
PDLIM7-203ENST00000359895 STK3Q13188 491 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms