RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 ZNF589Q86UQ0 364 aaPredicted RBP13.36□□□□□ -0.27
ABCD4-201ENST00000356924 CCDC171Q6TFL3 1326 aa13.36□□□□□ -0.27
ABCD4-201ENST00000356924 SNAP23O00161 211 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 TM4SF1P30408 202 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 CHRNDQ07001 517 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 TICAM2Q86XR7 235 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 ANKRD18AQ8IVF6 992 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 CELF1Q92879 486 aaKnown RBP13.35□□□□□ -0.27
ABCD4-201ENST00000356924 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 PANK2Q9BZ23 570 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 MCAMP43121 646 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 MYH7P12883 1935 aa13.35□□□□□ -0.27
ABCD4-201ENST00000356924 ARID4AP29374 1257 aaPredicted RBP13.34□□□□□ -0.27
ABCD4-201ENST00000356924 ZAP70P43403 619 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 PHKA1P46020 1223 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 SLFNL1Q499Z3 407 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 KCNB2Q92953 911 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
ABCD4-201ENST00000356924 SNX14Q9Y5W7 946 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 K7ELQ4 463 aaPredicted RBP13.34□□□□□ -0.27
ABCD4-201ENST00000356924 SLC5A1P13866 664 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 PI16Q6UXB8 463 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 SEC62Q99442 399 aaKnown RBP13.34□□□□□ -0.27
ABCD4-201ENST00000356924 MYO5AQ9Y4I1 1855 aaKnown RBP13.34□□□□□ -0.27
ABCD4-201ENST00000356924 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
ABCD4-201ENST00000356924 FKBP4Q02790 459 aaKnown RBP eCLIP13.34□□□□□ -0.27
ABCD4-201ENST00000356924 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
ABCD4-201ENST00000356924 NECTIN1Q15223 517 aa13.33□□□□□ -0.28
ABCD4-201ENST00000356924 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
ABCD4-201ENST00000356924 PRR5LQ6MZQ0 368 aa13.33□□□□□ -0.28
ABCD4-201ENST00000356924 ESPNB1AK53 854 aa13.33□□□□□ -0.28
ABCD4-201ENST00000356924 MRE11P49959 708 aa13.33□□□□□ -0.28
ABCD4-201ENST00000356924 CCDC129Q6ZRS4 1044 aa13.33□□□□□ -0.28
ABCD4-201ENST00000356924 RBM8AQ9Y5S9 174 aaKnown RBP13.33□□□□□ -0.28
ABCD4-201ENST00000356924 RNF113AO15541 343 aaKnown RBP13.32□□□□□ -0.28
ABCD4-201ENST00000356924 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
ABCD4-201ENST00000356924 CNBD1Q8NA66 436 aa13.32□□□□□ -0.28
ABCD4-201ENST00000356924 PDCL3Q9H2J4 239 aa13.32□□□□□ -0.28
ABCD4-201ENST00000356924 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
ABCD4-201ENST00000356924 DDR1Q08345 913 aa13.32□□□□□ -0.28
ABCD4-201ENST00000356924 HELLSQ9NRZ9 838 aa13.32□□□□□ -0.28
ABCD4-201ENST00000356924 DOCK2Q92608 1830 aa13.32□□□□□ -0.28
ABCD4-201ENST00000356924 TPM2P07951 284 aa13.31□□□□□ -0.28
ABCD4-201ENST00000356924 UQCRFS1P1P0C7P4 283 aa13.31□□□□□ -0.28
ABCD4-201ENST00000356924 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
ABCD4-201ENST00000356924 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-201ENST00000356924 WTIPA6NIX2 430 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-201ENST00000356924 SERPINB2P05120 415 aa13.31□□□□□ -0.28
ABCD4-201ENST00000356924 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-201ENST00000356924 PRPF40BQ6NWY9 871 aaKnown RBP13.31□□□□□ -0.28
ABCD4-201ENST00000356924 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
ABCD4-201ENST00000356924 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
ABCD4-201ENST00000356924 ST18O60284 1047 aa13.31□□□□□ -0.28
ABCD4-201ENST00000356924 DDIT3P35638 169 aa13.31□□□□□ -0.28
ABCD4-201ENST00000356924 NEK4P51957 841 aa13.31□□□□□ -0.28
ABCD4-201ENST00000356924 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
ABCD4-201ENST00000356924 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
ABCD4-201ENST00000356924 PIH1D3Q9NQM4 214 aaKnown RBP13.3□□□□□ -0.28
ABCD4-201ENST00000356924 HMG20BQ9P0W2 317 aa13.3□□□□□ -0.28
ABCD4-201ENST00000356924 MAST3O60307 1309 aa13.3□□□□□ -0.28
ABCD4-201ENST00000356924 M0R2C6 588 aa13.3□□□□□ -0.28
ABCD4-201ENST00000356924 MCM4P33991 863 aa13.3□□□□□ -0.28
ABCD4-201ENST00000356924 BCAMP50895 628 aa13.3□□□□□ -0.28
ABCD4-201ENST00000356924 SLC27A2O14975 620 aa13.29□□□□□ -0.28
ABCD4-201ENST00000356924 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
ABCD4-201ENST00000356924 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
ABCD4-201ENST00000356924 NPHP1O15259 732 aa13.29□□□□□ -0.28
ABCD4-201ENST00000356924 RASGRF1Q13972 1273 aa13.29□□□□□ -0.28
ABCD4-201ENST00000356924 OSBP2Q969R2 916 aa13.29□□□□□ -0.28
ABCD4-201ENST00000356924 TRIM44Q96DX7 344 aaPredicted RBP13.29□□□□□ -0.28
ABCD4-201ENST00000356924 UPF3BQ9BZI7 483 aaKnown RBP13.29□□□□□ -0.28
ABCD4-201ENST00000356924 ADCK5Q3MIX3 580 aa13.29□□□□□ -0.28
ABCD4-201ENST00000356924 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 ZFYP08048 801 aaPredicted RBP13.28□□□□□ -0.28
ABCD4-201ENST00000356924 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 SPATA5Q8NB90 893 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 TTC14Q96N46 770 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 ST5P78524 1137 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 GRAPQ13588 217 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 TTF1Q15361 905 aaPredicted RBP13.28□□□□□ -0.28
ABCD4-201ENST00000356924 SLC51AQ86UW1 340 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 GRAPLQ8TC17 118 aaPredicted RBP13.28□□□□□ -0.28
ABCD4-201ENST00000356924 TAF6LQ9Y6J9 622 aa13.28□□□□□ -0.28
ABCD4-201ENST00000356924 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.28
ABCD4-201ENST00000356924 VPS53Q5VIR6 699 aa13.27□□□□□ -0.28
ABCD4-201ENST00000356924 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.28
ABCD4-201ENST00000356924 RPAP1Q9BWH6 1393 aaPredicted RBP13.27□□□□□ -0.29
ABCD4-201ENST00000356924 TRAK2O60296 914 aa13.27□□□□□ -0.29
ABCD4-201ENST00000356924 ADD2P35612 726 aa13.27□□□□□ -0.29
ABCD4-201ENST00000356924 KCNJ4P48050 445 aa13.27□□□□□ -0.29
ABCD4-201ENST00000356924 APPBP2Q92624 585 aa13.27□□□□□ -0.29
ABCD4-201ENST00000356924 TM6SF1Q9BZW5 370 aa13.27□□□□□ -0.29
ABCD4-201ENST00000356924 QSER1Q2KHR3 1735 aa13.27□□□□□ -0.29
ABCD4-201ENST00000356924 GYG1P46976 350 aa13.26□□□□□ -0.29
ABCD4-201ENST00000356924 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
ABCD4-201ENST00000356924 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
ABCD4-201ENST00000356924 FLAD1Q8NFF5 587 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms