RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 HHIPL1Q96JK4 782 aa25.23■■□□□ 1.63
CEACAM3-201ENST00000344550 ABT1Q9ULW3 272 aaKnown RBP25.23■■□□□ 1.63
CEACAM3-201ENST00000344550 TRPM7Q96QT4 1865 aa25.23■■□□□ 1.63
CEACAM3-201ENST00000344550 SHTN1A0MZ66 631 aa25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 WTIPA6NIX2 430 aaPredicted RBP25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 KIF4BQ2VIQ3 1234 aa25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 TBC1D10BQ4KMP7 808 aaPredicted RBP25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 DACT2Q5SW24 774 aa25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 DCPSQ96C86 337 aaKnown RBP25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 CNNM1Q9NRU3 951 aa25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 HDAC5Q9UQL6 1122 aa25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 PCNTO95613 3336 aa25.22■■□□□ 1.63
CEACAM3-201ENST00000344550 TRAF5O00463 557 aa25.21■■□□□ 1.63
CEACAM3-201ENST00000344550 TXNRD3Q86VQ6 643 aa25.21■■□□□ 1.63
CEACAM3-201ENST00000344550 OGFOD1Q8N543 542 aa25.21■■□□□ 1.63
CEACAM3-201ENST00000344550 ARHGAP45Q92619 1136 aa25.21■■□□□ 1.63
CEACAM3-201ENST00000344550 GLIS2Q9BZE0 524 aaPredicted RBP25.21■■□□□ 1.63
CEACAM3-201ENST00000344550 API5Q9BZZ5 524 aaKnown RBP25.21■■□□□ 1.63
CEACAM3-201ENST00000344550 USP44Q9H0E7 712 aa25.21■■□□□ 1.63
CEACAM3-201ENST00000344550 ECE1P42892 770 aa25.2■■□□□ 1.62
CEACAM3-201ENST00000344550 VEGFBP49765 207 aa25.2■■□□□ 1.62
CEACAM3-201ENST00000344550 TLL2Q9Y6L7 1015 aa25.2■■□□□ 1.62
CEACAM3-201ENST00000344550 IRS2Q9Y4H2 1338 aa25.19■■□□□ 1.62
CEACAM3-201ENST00000344550 TTLL5Q6EMB2 1281 aa25.19■■□□□ 1.62
CEACAM3-201ENST00000344550 KRT26Q7Z3Y9 468 aa25.19■■□□□ 1.62
CEACAM3-201ENST00000344550 MROH5Q6ZUA9 1318 aa25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 KIF16BQ96L93 1317 aa25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 PITPNM2Q9BZ72 1349 aa25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 CELF2O95319 508 aaKnown RBP25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 RARSP54136 660 aaKnown RBP25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 UBE4AQ14139 1066 aa25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 ZNF804AQ7Z570 1209 aa25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 BICC1Q9H694 974 aaKnown RBP25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 CD209Q9NNX6 404 aa25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 MYOZ2Q9NPC6 264 aa25.18■■□□□ 1.62
CEACAM3-201ENST00000344550 EGFRP00533 1210 aa25.17■■□□□ 1.62
CEACAM3-201ENST00000344550 IL1R1P14778 569 aa25.17■■□□□ 1.62
CEACAM3-201ENST00000344550 RBM26Q5T8P6 1007 aaKnown RBP25.17■■□□□ 1.62
CEACAM3-201ENST00000344550 SAPCD2Q86UD0 394 aa25.17■■□□□ 1.62
CEACAM3-201ENST00000344550 SULF1Q8IWU6 871 aa25.17■■□□□ 1.62
CEACAM3-201ENST00000344550 MIER1Q8N108 512 aa25.17■■□□□ 1.62
CEACAM3-201ENST00000344550 TAF5LO75529 589 aa25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 HSPA1AP0DMV8 641 aaKnown RBP25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 HSPA1BP0DMV9 641 aaKnown RBP25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 FKBP1AP62942 108 aaKnown RBP25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 USP48Q86UV5 1035 aa25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 ANKRD44Q8N8A2 993 aa25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 ZNF594Q96JF6 807 aaPredicted RBP25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 NOB1Q9ULX3 412 aaKnown RBP25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 RIPOR2Q9Y4F9 1068 aa25.16■■□□□ 1.62
CEACAM3-201ENST00000344550 WDR33Q9C0J8 1336 aaKnown RBP25.15■■□□□ 1.62
CEACAM3-201ENST00000344550 FMR1Q06787 632 aaKnown RBP eCLIP25.15■■□□□ 1.62
CEACAM3-201ENST00000344550 HELBQ8NG08 1087 aaPredicted RBP25.15■■□□□ 1.62
CEACAM3-201ENST00000344550 KLRK1P26718 216 aa25.14■■□□□ 1.62
CEACAM3-201ENST00000344550 MAP2K1Q02750 393 aaPredicted RBP25.14■■□□□ 1.62
CEACAM3-201ENST00000344550 SCARF1Q14162 830 aa25.14■■□□□ 1.62
CEACAM3-201ENST00000344550 HDAC9Q9UKV0 1011 aa25.14■■□□□ 1.62
CEACAM3-201ENST00000344550 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
CEACAM3-201ENST00000344550 GGA3Q9NZ52 723 aa25.13■■□□□ 1.61
CEACAM3-201ENST00000344550 MAP2K2P36507 400 aa25.12■■□□□ 1.61
CEACAM3-201ENST00000344550 GTF2IP78347 998 aa25.12■■□□□ 1.61
CEACAM3-201ENST00000344550 CAPNS2Q96L46 248 aa25.12■■□□□ 1.61
CEACAM3-201ENST00000344550 FBXO3Q9UK99 471 aa25.12■■□□□ 1.61
CEACAM3-201ENST00000344550 A0A1B0GUL6 1792 aa25.12■■□□□ 1.61
CEACAM3-201ENST00000344550 SASH1O94885 1247 aa25.11■■□□□ 1.61
CEACAM3-201ENST00000344550 UBTFL1P0CB47 393 aaPredicted RBP25.11■■□□□ 1.61
CEACAM3-201ENST00000344550 WBP1LQ9NX94 342 aa25.11■■□□□ 1.61
CEACAM3-201ENST00000344550 C2orf69Q8N8R5 385 aa25.1■■□□□ 1.61
CEACAM3-201ENST00000344550 FBXW7Q969H0 707 aa25.1■■□□□ 1.61
CEACAM3-201ENST00000344550 AIDAQ96BJ3 306 aa25.1■■□□□ 1.61
CEACAM3-201ENST00000344550 ZNF646O15015 1829 aaPredicted RBP25.09■■□□□ 1.61
CEACAM3-201ENST00000344550 SNAP23O00161 211 aa25.09■■□□□ 1.61
CEACAM3-201ENST00000344550 PLIN1O60240 522 aa25.09■■□□□ 1.61
CEACAM3-201ENST00000344550 FKBP1BP68106 108 aa25.09■■□□□ 1.61
CEACAM3-201ENST00000344550 ANGEL2Q5VTE6 544 aaKnown RBP25.09■■□□□ 1.61
CEACAM3-201ENST00000344550 INTS3Q68E01 1043 aaKnown RBP25.09■■□□□ 1.61
CEACAM3-201ENST00000344550 PUS3Q9BZE2 481 aaKnown RBP25.09■■□□□ 1.61
CEACAM3-201ENST00000344550 FAM205AQ6ZU69 1335 aa25.09■■□□□ 1.61
CEACAM3-201ENST00000344550 POLR2AP24928 1970 aaKnown RBP25.08■■□□□ 1.61
CEACAM3-201ENST00000344550 PDE8BO95263 885 aa25.08■■□□□ 1.61
CEACAM3-201ENST00000344550 HIBADHP31937 336 aaKnown RBP25.08■■□□□ 1.61
CEACAM3-201ENST00000344550 MTMR14Q8NCE2 650 aa25.08■■□□□ 1.61
CEACAM3-201ENST00000344550 TDRD7Q8NHU6 1098 aaKnown RBP25.08■■□□□ 1.61
CEACAM3-201ENST00000344550 ZNF408Q9H9D4 720 aa25.08■■□□□ 1.61
CEACAM3-201ENST00000344550 GBA2Q9HCG7 927 aaPredicted RBP25.08■■□□□ 1.61
CEACAM3-201ENST00000344550 WNT10BO00744 389 aa25.07■■□□□ 1.6
CEACAM3-201ENST00000344550 HNRNPUQ00839 825 aaKnown RBP eCLIP25.07■■□□□ 1.6
CEACAM3-201ENST00000344550 METTL24Q5JXM2 366 aa25.07■■□□□ 1.6
CEACAM3-201ENST00000344550 IFFO2Q5TF58 517 aa25.07■■□□□ 1.6
CEACAM3-201ENST00000344550 THSD7BQ9C0I4 1608 aa25.07■■□□□ 1.6
CEACAM3-201ENST00000344550 ADM5C9JUS6 153 aa25.06■■□□□ 1.6
CEACAM3-201ENST00000344550 KIAA0825Q8IV33 1275 aa25.06■■□□□ 1.6
CEACAM3-201ENST00000344550 VGLL2Q8N8G2 317 aa25.06■■□□□ 1.6
CEACAM3-201ENST00000344550 ZBED3Q96IU2 234 aaPredicted RBP25.06■■□□□ 1.6
CEACAM3-201ENST00000344550 FAM84BQ96KN1 310 aaPredicted RBP25.06■■□□□ 1.6
CEACAM3-201ENST00000344550 MXD3Q9BW11 206 aa25.06■■□□□ 1.6
CEACAM3-201ENST00000344550 GNAI3P08754 354 aa25.05■■□□□ 1.6
CEACAM3-201ENST00000344550 CTCFP49711 727 aaPredicted RBP25.05■■□□□ 1.6
CEACAM3-201ENST00000344550 HUNKP57058 714 aa25.05■■□□□ 1.6
CEACAM3-201ENST00000344550 NBPF9Q3BBW0 867 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms