RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
TRIO-202ENST00000344204 CCDC77Q9BR77 488 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 IKBKGQ9Y6K9 419 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 SH3GL3Q99963 347 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 YY1AP1Q9H869 796 aa15.41■□□□□ 0.06
TRIO-202ENST00000344204 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
TRIO-202ENST00000344204 PTPRCP08575 1304 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 RMND1Q9NWS8 449 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 GOLGA8KD6RF30 607 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 MYO1BO43795 1136 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 CCDC122Q5T0U0 273 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 NECAB1Q8N987 351 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 SERPINA10Q9UK55 444 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 NLRP5P59047 1200 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 ANTXR1Q9H6X2 564 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 MRFAP1Q9Y605 127 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 SATB1Q01826 763 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 RUFY4Q6ZNE9 571 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 SLC24A3Q9HC58 644 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 PIK3R5Q8WYR1 880 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 IL16Q14005 1332 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 GADD45BO75293 160 aaPredicted RBP15.4■□□□□ 0.06
TRIO-202ENST00000344204 PPP1R14CQ8TAE6 165 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 EID1Q9Y6B2 187 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 LARP1Q6PKG0 1096 aaKnown RBP15.4■□□□□ 0.06
TRIO-202ENST00000344204 CCDC97Q96F63 343 aaPredicted RBP15.4■□□□□ 0.06
TRIO-202ENST00000344204 NKIRAS1Q9NYS0 192 aa15.4■□□□□ 0.06
TRIO-202ENST00000344204 ATP5DP30049 168 aa15.39■□□□□ 0.05
TRIO-202ENST00000344204 SLFNL1Q499Z3 407 aa15.39■□□□□ 0.05
TRIO-202ENST00000344204 TRIM6Q9C030 488 aaPredicted RBP15.39■□□□□ 0.05
TRIO-202ENST00000344204 CXorf56Q9H5V9 222 aa15.39■□□□□ 0.05
TRIO-202ENST00000344204 ZC3H6P61129 1189 aaKnown RBP15.39■□□□□ 0.05
TRIO-202ENST00000344204 TSHZ3Q63HK5 1081 aa15.39■□□□□ 0.05
TRIO-202ENST00000344204 FBXO38Q6PIJ6 1188 aa15.39■□□□□ 0.05
TRIO-202ENST00000344204 NUTM2AQ8IVF1 878 aaPredicted RBP15.39■□□□□ 0.05
TRIO-202ENST00000344204 RAD21O60216 631 aa15.39■□□□□ 0.05
TRIO-202ENST00000344204 PDE1CQ14123 709 aaPredicted RBP15.39■□□□□ 0.05
TRIO-202ENST00000344204 STAG1Q8WVM7 1258 aa15.39■□□□□ 0.05
TRIO-202ENST00000344204 PYCARDQ9ULZ3 195 aa15.39■□□□□ 0.05
TRIO-202ENST00000344204 IDEP14735 1019 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 ATL3Q6DD88 541 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.053e-6■■□□□ 12
TRIO-202ENST00000344204 IQCA1Q86XH1 822 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 FAM204AQ9H8W3 233 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 RPGRIP1Q96KN7 1286 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 CDC25BP30305 580 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 C8orf74Q6P047 294 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 KIAA1524Q8TCG1 905 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 TTC41PQ6P2S7 1318 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 EVI5LQ96CN4 794 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 POTEJP0CG39 1038 aa15.38■□□□□ 0.05
TRIO-202ENST00000344204 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
TRIO-202ENST00000344204 GKAP1Q5VSY0 366 aaPredicted RBP15.38■□□□□ 0.05
TRIO-202ENST00000344204 LRRC45Q96CN5 670 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 CLTAP09496 248 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 MCUR1Q96AQ8 359 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 LARSQ9P2J5 1176 aaKnown RBP15.37■□□□□ 0.05
TRIO-202ENST00000344204 SMIM23A6NLE4 172 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 MYL5Q02045 173 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
TRIO-202ENST00000344204 SSRP1Q08945 709 aaKnown RBP15.37■□□□□ 0.05
TRIO-202ENST00000344204 TRIM47Q96LD4 638 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 CREB3O43889 395 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 USH1CQ9Y6N9 552 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 IGSF22Q8N9C0 903 aa15.37■□□□□ 0.05
TRIO-202ENST00000344204 EIF3CLB5ME19 914 aaKnown RBP15.36■□□□□ 0.05
TRIO-202ENST00000344204 CLCN6P51797 869 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 EIF3CQ99613 913 aaKnown RBP15.36■□□□□ 0.05
TRIO-202ENST00000344204 BCAS4Q8TDM0 211 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 FANCCQ00597 558 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 LRMPQ12912 555 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 ARHGAP24Q8N264 748 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 MTRF1LQ9UGC7 380 aaKnown RBP15.36■□□□□ 0.05
TRIO-202ENST00000344204 CYP26C1Q6V0L0 522 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 PAK2Q13177 524 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 ANAPC4Q9UJX5 808 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 MORC2Q9Y6X9 1032 aaPredicted RBP15.36■□□□□ 0.05
TRIO-202ENST00000344204 TRIM14Q14142 442 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 CCDC62Q6P9F0 684 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 KCNK9Q9NPC2 374 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 PLCB1Q9NQ66 1216 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 SPTLC2O15270 562 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 PRPHP41219 470 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 UBXN1Q04323 297 aa15.36■□□□□ 0.05
TRIO-202ENST00000344204 PHLPP2Q6ZVD8 1323 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 SPTLC3Q9NUV7 552 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 ORC3Q9UBD5 711 aaPredicted RBP15.35■□□□□ 0.05
TRIO-202ENST00000344204 MYH13Q9UKX3 1938 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 ZSCAN20P17040 1043 aaPredicted RBP15.35■□□□□ 0.05
TRIO-202ENST00000344204 BRF1Q92994 677 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 CCDC42Q96M95 316 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 MACROD2A1Z1Q3 448 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 TSC22D3Q99576 134 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 CASQ2O14958 399 aaPredicted RBP15.35■□□□□ 0.05
TRIO-202ENST00000344204 CCDC92Q53HC0 331 aaPredicted RBP15.35■□□□□ 0.05
TRIO-202ENST00000344204 LRRC8AQ8IWT6 810 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 PLVAPQ9BX97 442 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 STK38LQ9Y2H1 464 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms