RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ATP2B4P23634 1241 aa21.31■■□□□ 1
NECTIN1-202ENST00000340882 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
NECTIN1-202ENST00000340882 SPRYD7Q5W111 196 aa21.31■■□□□ 1
NECTIN1-202ENST00000340882 MYD88Q99836 296 aa21.31■■□□□ 1
NECTIN1-202ENST00000340882 TRIM17Q9Y577 477 aa21.31■■□□□ 1
NECTIN1-202ENST00000340882 MYH3P11055 1940 aa21.3■■□□□ 1
NECTIN1-202ENST00000340882 PDE8AO60658 829 aa21.3■■□□□ 1
NECTIN1-202ENST00000340882 LDLRAD1Q5T700 205 aa21.3■■□□□ 1
NECTIN1-202ENST00000340882 OTOP1Q7RTM1 612 aa21.3■■□□□ 1
NECTIN1-202ENST00000340882 RIC3Q7Z5B4 369 aa21.3■■□□□ 1
NECTIN1-202ENST00000340882 PCCAP05165 728 aaPredicted RBP21.29■■□□□ 1
NECTIN1-202ENST00000340882 HOXB7P09629 217 aa21.29■■□□□ 1
NECTIN1-202ENST00000340882 NF2P35240 595 aa21.29■■□□□ 1
NECTIN1-202ENST00000340882 DUSP27Q5VZP5 1158 aa21.29■■□□□ 1
NECTIN1-202ENST00000340882 TXNRD3Q86VQ6 643 aa21.29■■□□□ 1
NECTIN1-202ENST00000340882 ANKRD18AQ8IVF6 992 aa21.29■■□□□ 1
NECTIN1-202ENST00000340882 MED23Q9ULK4 1368 aa21.28■■□□□ 1
NECTIN1-202ENST00000340882 CAP1Q01518 475 aa21.28■■□□□ 1
NECTIN1-202ENST00000340882 FBXW7Q969H0 707 aa21.28■■□□□ 1
NECTIN1-202ENST00000340882 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.28■■□□□ 1
NECTIN1-202ENST00000340882 ANGEL1Q9UNK9 670 aaKnown RBP21.28■■□□□ 1
NECTIN1-202ENST00000340882 FXR1P51114 621 aaKnown RBP eCLIP21.27■■□□□ 1
NECTIN1-202ENST00000340882 ARMC9Q7Z3E5 817 aa21.27■■□□□ 1
NECTIN1-202ENST00000340882 IFNL1Q8IU54 200 aa21.27■■□□□ 1
NECTIN1-202ENST00000340882 IGF2BP3O00425 579 aaKnown RBP eCLIP21.26■□□□□ 0.99
NECTIN1-202ENST00000340882 EN2P19622 333 aaPredicted RBP21.26■□□□□ 0.99
NECTIN1-202ENST00000340882 OGFOD1Q8N543 542 aa21.26■□□□□ 0.99
NECTIN1-202ENST00000340882 CCDC191Q8NCU4 936 aa21.26■□□□□ 0.99
NECTIN1-202ENST00000340882 ZBED3Q96IU2 234 aaPredicted RBP21.26■□□□□ 0.99
NECTIN1-202ENST00000340882 CLMNQ96JQ2 1002 aa21.26■□□□□ 0.99
NECTIN1-202ENST00000340882 MINPP1Q9UNW1 487 aa21.26■□□□□ 0.99
NECTIN1-202ENST00000340882 SSC5DA1L4H1 1573 aa21.26■□□□□ 0.99
NECTIN1-202ENST00000340882 ECM29Q5VYK3 1845 aa21.25■□□□□ 0.99
NECTIN1-202ENST00000340882 GOLGA2Q08379 1002 aa21.25■□□□□ 0.99
NECTIN1-202ENST00000340882 STRIP1Q5VSL9 837 aa21.25■□□□□ 0.99
NECTIN1-202ENST00000340882 ALDH1A1P00352 501 aa21.24■□□□□ 0.99
NECTIN1-202ENST00000340882 KLRK1P26718 216 aa21.24■□□□□ 0.99
NECTIN1-202ENST00000340882 INTS3Q68E01 1043 aaKnown RBP21.24■□□□□ 0.99
NECTIN1-202ENST00000340882 CD99L2Q8TCZ2 262 aa21.24■□□□□ 0.99
NECTIN1-202ENST00000340882 CWC25Q9NXE8 425 aaPredicted RBP21.24■□□□□ 0.99
NECTIN1-202ENST00000340882 PTPN22Q9Y2R2 807 aa21.24■□□□□ 0.99
NECTIN1-202ENST00000340882 HSP90B1P14625 803 aaKnown RBP21.23■□□□□ 0.99
NECTIN1-202ENST00000340882 CCT4P50991 539 aaKnown RBP21.23■□□□□ 0.99
NECTIN1-202ENST00000340882 APOBEC3FQ8IUX4 373 aaKnown RBP21.23■□□□□ 0.99
NECTIN1-202ENST00000340882 KIAA0825Q8IV33 1275 aa21.23■□□□□ 0.99
NECTIN1-202ENST00000340882 MBIPQ9NS73 344 aa21.23■□□□□ 0.99
NECTIN1-202ENST00000340882 MANSC4A6NHS7 340 aaPredicted RBP21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 CTSWP56202 376 aa21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 TTLL11Q8NHH1 800 aa21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 SLC10A4Q96EP9 437 aa21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 WNK4Q96J92 1243 aa21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 GREM2Q9H772 168 aa21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 BSDC1Q9NW68 430 aaPredicted RBP21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 PCDHAC2Q9Y5I4 1007 aa21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 MYO3BQ8WXR4 1341 aa21.22■□□□□ 0.99
NECTIN1-202ENST00000340882 ELL2O00472 640 aaPredicted RBP21.21■□□□□ 0.99
NECTIN1-202ENST00000340882 GJA5P36382 358 aa21.21■□□□□ 0.99
NECTIN1-202ENST00000340882 TTLL5Q6EMB2 1281 aa21.21■□□□□ 0.99
NECTIN1-202ENST00000340882 METTL22Q9BUU2 404 aaPredicted RBP21.21■□□□□ 0.99
NECTIN1-202ENST00000340882 COA1Q9GZY4 146 aa21.21■□□□□ 0.99
NECTIN1-202ENST00000340882 SZT2Q5T011 3432 aa21.21■□□□□ 0.99
NECTIN1-202ENST00000340882 OTOFQ9HC10 1997 aa21.2■□□□□ 0.98
NECTIN1-202ENST00000340882 INHBEP58166 350 aa21.2■□□□□ 0.98
NECTIN1-202ENST00000340882 MAP3K11Q16584 847 aa21.2■□□□□ 0.98
NECTIN1-202ENST00000340882 ARMC5Q96C12 935 aa21.2■□□□□ 0.98
NECTIN1-202ENST00000340882 CDC5LQ99459 802 aaKnown RBP21.2■□□□□ 0.98
NECTIN1-202ENST00000340882 DEFB129Q9H1M3 183 aa21.2■□□□□ 0.98
NECTIN1-202ENST00000340882 CEP290O15078 2479 aa21.19■□□□□ 0.98
NECTIN1-202ENST00000340882 CRHR2Q13324 411 aa21.19■□□□□ 0.98
NECTIN1-202ENST00000340882 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
NECTIN1-202ENST00000340882 COLQQ9Y215 455 aaPredicted RBP21.19■□□□□ 0.98
NECTIN1-202ENST00000340882 IGKV5-2P06315 115 aa21.18■□□□□ 0.98
NECTIN1-202ENST00000340882 ZBTB48P10074 688 aaPredicted RBP21.18■□□□□ 0.98
NECTIN1-202ENST00000340882 GTF2IP78347 998 aa21.18■□□□□ 0.98
NECTIN1-202ENST00000340882 ERO1AQ96HE7 468 aa21.18■□□□□ 0.98
NECTIN1-202ENST00000340882 PTPN18Q99952 460 aa21.18■□□□□ 0.98
NECTIN1-202ENST00000340882 AOX1Q06278 1338 aa21.18■□□□□ 0.98
NECTIN1-202ENST00000340882 TRIOBPQ9H2D6 2365 aa21.17■□□□□ 0.98
NECTIN1-202ENST00000340882 ZNF853P0CG23 659 aa21.17■□□□□ 0.98
NECTIN1-202ENST00000340882 CERS5Q8N5B7 392 aa21.17■□□□□ 0.98
NECTIN1-202ENST00000340882 COL1A1P02452 1464 aaPredicted RBP21.17■□□□□ 0.98
NECTIN1-202ENST00000340882 ZSWIM8A7E2V4 1837 aa21.16■□□□□ 0.98
NECTIN1-202ENST00000340882 EFCC1Q9HA90 598 aa21.16■□□□□ 0.98
NECTIN1-202ENST00000340882 MAP3K2Q9Y2U5 619 aa21.16■□□□□ 0.98
NECTIN1-202ENST00000340882 A0A1B0GUL6 1792 aa21.15■□□□□ 0.98
NECTIN1-202ENST00000340882 ZNF804BA4D1E1 1349 aa21.15■□□□□ 0.98
NECTIN1-202ENST00000340882 LEMD3Q9Y2U8 911 aa21.15■□□□□ 0.98
NECTIN1-202ENST00000340882 SNAP23O00161 211 aa21.14■□□□□ 0.97
NECTIN1-202ENST00000340882 MMP14P50281 582 aa21.14■□□□□ 0.97
NECTIN1-202ENST00000340882 NBPF12Q5TAG4 269 aaPredicted RBP21.14■□□□□ 0.97
NECTIN1-202ENST00000340882 C8orf58Q8NAV2 365 aa21.14■□□□□ 0.97
NECTIN1-202ENST00000340882 CLRN2A0PK11 232 aa21.13■□□□□ 0.97
NECTIN1-202ENST00000340882 PPP1R12BO60237 982 aaPredicted RBP21.13■□□□□ 0.97
NECTIN1-202ENST00000340882 USP2O75604 605 aaPredicted RBP21.13■□□□□ 0.97
NECTIN1-202ENST00000340882 SP3Q02447 781 aa21.13■□□□□ 0.97
NECTIN1-202ENST00000340882 DLGAP5Q15398 846 aa21.13■□□□□ 0.97
NECTIN1-202ENST00000340882 CWF19L2Q2TBE0 894 aaKnown RBP21.13■□□□□ 0.97
NECTIN1-202ENST00000340882 ZNF333Q96JL9 665 aa21.13■□□□□ 0.97
NECTIN1-202ENST00000340882 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
NECTIN1-202ENST00000340882 IRS2Q9Y4H2 1338 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms