RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 MICAL1Q8TDZ2 1067 aa19.74■□□□□ 0.75
CDK11B-201ENST00000340677 LARP6Q9BRS8 491 aaKnown RBP19.74■□□□□ 0.75
CDK11B-201ENST00000340677 ZSCAN16Q9H4T2 348 aaPredicted RBP19.74■□□□□ 0.75
CDK11B-201ENST00000340677 PTPRCP08575 1304 aa19.74■□□□□ 0.75
CDK11B-201ENST00000340677 FAM83GA6ND36 823 aa19.74■□□□□ 0.75
CDK11B-201ENST00000340677 RBBP5Q15291 538 aaKnown RBP19.74■□□□□ 0.75
CDK11B-201ENST00000340677 CDC37Q16543 378 aaPredicted RBP19.74■□□□□ 0.75
CDK11B-201ENST00000340677 FBXO38Q6PIJ6 1188 aa19.74■□□□□ 0.75
CDK11B-201ENST00000340677 STAG1Q8WVM7 1258 aa19.74■□□□□ 0.75
CDK11B-201ENST00000340677 IRX2Q9BZI1 471 aaPredicted RBP19.74■□□□□ 0.75
CDK11B-201ENST00000340677 NUCB2P80303 420 aa19.73■□□□□ 0.75
CDK11B-201ENST00000340677 GPS2Q13227 327 aa19.73■□□□□ 0.75
CDK11B-201ENST00000340677 LEKR1Q6ZMV7 388 aa19.73■□□□□ 0.75
CDK11B-201ENST00000340677 NOL8Q76FK4 1167 aaKnown RBP19.73■□□□□ 0.75
CDK11B-201ENST00000340677 HELBQ8NG08 1087 aaPredicted RBP19.73■□□□□ 0.75
CDK11B-201ENST00000340677 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
CDK11B-201ENST00000340677 CCDC178Q5BJE1 867 aa19.73■□□□□ 0.75
CDK11B-201ENST00000340677 PUS10Q3MIT2 529 aaKnown RBP19.72■□□□□ 0.75
CDK11B-201ENST00000340677 PLEKHO1Q53GL0 409 aaPredicted RBP19.72■□□□□ 0.75
CDK11B-201ENST00000340677 PANK1Q8TE04 598 aa19.72■□□□□ 0.75
CDK11B-201ENST00000340677 G3BP2Q9UN86 482 aaKnown RBP19.72■□□□□ 0.75
CDK11B-201ENST00000340677 CACNA1FO60840 1977 aa19.72■□□□□ 0.75
CDK11B-201ENST00000340677 SMTNL1A8MU46 457 aa19.72■□□□□ 0.75
CDK11B-201ENST00000340677 CHMLP26374 656 aa19.72■□□□□ 0.75
CDK11B-201ENST00000340677 SYNPO2Q9UMS6 1093 aa19.72■□□□□ 0.75
CDK11B-201ENST00000340677 COG6Q9Y2V7 657 aa19.72■□□□□ 0.75
CDK11B-201ENST00000340677 GCFC2P16383 781 aaKnown RBP19.71■□□□□ 0.75
CDK11B-201ENST00000340677 ICA1Q05084 483 aa19.71■□□□□ 0.75
CDK11B-201ENST00000340677 PLEKHG4BQ96PX9 1271 aa19.71■□□□□ 0.75
CDK11B-201ENST00000340677 BAG1Q99933 345 aaPredicted RBP19.71■□□□□ 0.75
CDK11B-201ENST00000340677 CEMIPQ8WUJ3 1361 aa19.71■□□□□ 0.75
CDK11B-201ENST00000340677 DCTN1Q14203 1278 aa19.71■□□□□ 0.75
CDK11B-201ENST00000340677 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
CDK11B-201ENST00000340677 CORO7P57737 925 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 C16orf87Q6PH81 154 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 ARMC2Q8NEN0 867 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 PARP4Q9UKK3 1724 aaKnown RBP19.7■□□□□ 0.74
CDK11B-201ENST00000340677 TMCO5BA8MYB1 307 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 VAMP4O75379 141 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 LRRC31Q6UY01 552 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 CLEC17AQ6ZS10 378 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 MCM10Q7L590 875 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 USHBP1Q8N6Y0 703 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 KIAA1524Q8TCG1 905 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 CABLES1Q8TDN4 633 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 TMEM165Q9HC07 324 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.7■□□□□ 0.74
CDK11B-201ENST00000340677 SIPA1L3O60292 1781 aaPredicted RBP19.7■□□□□ 0.74
CDK11B-201ENST00000340677 KDM3BQ7LBC6 1761 aa19.7■□□□□ 0.74
CDK11B-201ENST00000340677 POLR3GO15318 223 aaPredicted RBP19.69■□□□□ 0.74
CDK11B-201ENST00000340677 RBM12BQ8IXT5 1001 aaKnown RBP19.69■□□□□ 0.74
CDK11B-201ENST00000340677 CCDC34Q96HJ3 373 aa19.69■□□□□ 0.74
CDK11B-201ENST00000340677 TPM4P67936 248 aa19.69■□□□□ 0.74
CDK11B-201ENST00000340677 AKAP4Q5JQC9 854 aa19.69■□□□□ 0.74
CDK11B-201ENST00000340677 CPLX2Q6PUV4 134 aaKnown RBP19.69■□□□□ 0.74
CDK11B-201ENST00000340677 HSCBQ8IWL3 235 aa19.69■□□□□ 0.74
CDK11B-201ENST00000340677 PARD3BQ8TEW8 1205 aa19.69■□□□□ 0.74
CDK11B-201ENST00000340677 SSH1Q8WYL5 1049 aa19.69■□□□□ 0.74
CDK11B-201ENST00000340677 CWC25Q9NXE8 425 aaPredicted RBP19.69■□□□□ 0.74
CDK11B-201ENST00000340677 COL14A1Q05707 1796 aaKnown RBP19.68■□□□□ 0.74
CDK11B-201ENST00000340677 PHLPP1O60346 1717 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 PLA2G4AP47712 749 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 LRSAM1Q6UWE0 723 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 GBP6Q6ZN66 633 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 TMX4Q9H1E5 349 aaPredicted RBP19.68■□□□□ 0.74
CDK11B-201ENST00000340677 EXOC6BQ9Y2D4 811 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 COL16A1Q07092 1604 aaPredicted RBP19.68■□□□□ 0.74
CDK11B-201ENST00000340677 IPO5O00410 1097 aaKnown RBP19.68■□□□□ 0.74
CDK11B-201ENST00000340677 SGSM2O43147 1006 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 IFT88Q13099 833 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 AKNAD1Q5T1N1 836 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 CWC27Q6UX04 472 aaKnown RBP19.68■□□□□ 0.74
CDK11B-201ENST00000340677 OGFOD1Q8N543 542 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 MRFAP1L1Q96HT8 127 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 SCN11AQ9UI33 1791 aa19.68■□□□□ 0.74
CDK11B-201ENST00000340677 ZSCAN9O15535 394 aaPredicted RBP19.67■□□□□ 0.74
CDK11B-201ENST00000340677 PYGBP11216 843 aa19.67■□□□□ 0.74
CDK11B-201ENST00000340677 CCDC30Q5VVM6 783 aa19.67■□□□□ 0.74
CDK11B-201ENST00000340677 TDRD7Q8NHU6 1098 aaKnown RBP19.67■□□□□ 0.74
CDK11B-201ENST00000340677 FHOD1Q9Y613 1164 aa19.67■□□□□ 0.74
CDK11B-201ENST00000340677 COL5A2P05997 1499 aaPredicted RBP19.67■□□□□ 0.74
CDK11B-201ENST00000340677 PIP4K2BP78356 416 aa19.67■□□□□ 0.74
CDK11B-201ENST00000340677 SLFNL1Q499Z3 407 aa19.67■□□□□ 0.74
CDK11B-201ENST00000340677 ANKRD45Q5TZF3 282 aa19.67■□□□□ 0.74
CDK11B-201ENST00000340677 CDC37L1Q7L3B6 337 aa19.67■□□□□ 0.74
CDK11B-201ENST00000340677 TBC1D5Q92609 795 aa19.67■□□□□ 0.74
CDK11B-201ENST00000340677 FMNL1O95466 1100 aaPredicted RBP19.66■□□□□ 0.74
CDK11B-201ENST00000340677 TWISTNBQ3B726 338 aaPredicted RBP19.66■□□□□ 0.74
CDK11B-201ENST00000340677 ARHGAP45Q92619 1136 aa19.66■□□□□ 0.74
CDK11B-201ENST00000340677 BICD1Q96G01 975 aa19.66■□□□□ 0.74
CDK11B-201ENST00000340677 IQCGQ9H095 443 aaKnown RBP19.66■□□□□ 0.74
CDK11B-201ENST00000340677 PDIA5Q14554 519 aa19.66■□□□□ 0.74
CDK11B-201ENST00000340677 MCM6Q14566 821 aa19.66■□□□□ 0.74
CDK11B-201ENST00000340677 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
CDK11B-201ENST00000340677 CLUAP1Q96AJ1 413 aa19.66■□□□□ 0.74
CDK11B-201ENST00000340677 AGAP3Q96P47 875 aa19.66■□□□□ 0.74
CDK11B-201ENST00000340677 C3orf20Q8ND61 904 aa19.65■□□□□ 0.74
CDK11B-201ENST00000340677 IL17REQ8NFR9 667 aa19.65■□□□□ 0.74
CDK11B-201ENST00000340677 C17orf50Q8WW18 174 aa19.65■□□□□ 0.74
CDK11B-201ENST00000340677 N4BP2L2Q92802 583 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms