RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 WTIPA6NIX2 430 aaPredicted RBP21.95■■□□□ 1.1
SDCBP2-201ENST00000339987 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
SDCBP2-201ENST00000339987 SUPT20HQ8NEM7 779 aa21.95■■□□□ 1.1
SDCBP2-201ENST00000339987 XAGE2Q96GT9 111 aa21.95■■□□□ 1.1
SDCBP2-201ENST00000339987 DBNDD2Q9BQY9 259 aa21.95■■□□□ 1.1
SDCBP2-201ENST00000339987 CCDC8Q9H0W5 538 aaPredicted RBP21.95■■□□□ 1.1
SDCBP2-201ENST00000339987 MED23Q9ULK4 1368 aa21.94■■□□□ 1.1
SDCBP2-201ENST00000339987 FER1L6Q2WGJ9 1857 aa21.94■■□□□ 1.1
SDCBP2-201ENST00000339987 C6orf229H3BNL8 230 aa21.94■■□□□ 1.1
SDCBP2-201ENST00000339987 PDE4AP27815 886 aa21.94■■□□□ 1.1
SDCBP2-201ENST00000339987 TLR7Q9NYK1 1049 aaKnown RBP21.94■■□□□ 1.1
SDCBP2-201ENST00000339987 ADORA1P30542 326 aa21.93■■□□□ 1.1
SDCBP2-201ENST00000339987 OTUD7AQ8TE49 926 aaPredicted RBP21.93■■□□□ 1.1
SDCBP2-201ENST00000339987 EYA3Q99504 573 aa21.93■■□□□ 1.1
SDCBP2-201ENST00000339987 FKBP4Q02790 459 aaKnown RBP eCLIP21.92■■□□□ 1.1
SDCBP2-201ENST00000339987 BCL11AQ9H165 835 aa21.92■■□□□ 1.1
SDCBP2-201ENST00000339987 STAP2Q9UGK3 403 aa21.92■■□□□ 1.1
SDCBP2-201ENST00000339987 LTBP3Q9NS15 1303 aa21.92■■□□□ 1.1
SDCBP2-201ENST00000339987 MX1P20591 662 aa21.91■■□□□ 1.1
SDCBP2-201ENST00000339987 KLRK1P26718 216 aa21.91■■□□□ 1.1
SDCBP2-201ENST00000339987 GPATCH3Q96I76 525 aa21.91■■□□□ 1.1
SDCBP2-201ENST00000339987 VPS33BQ9H267 617 aa21.91■■□□□ 1.1
SDCBP2-201ENST00000339987 TTC41PQ6P2S7 1318 aa21.91■■□□□ 1.1
SDCBP2-201ENST00000339987 CAVIN4Q5BKX8 364 aa21.9■■□□□ 1.1
SDCBP2-201ENST00000339987 GORABQ5T7V8 394 aa21.9■■□□□ 1.1
SDCBP2-201ENST00000339987 FBXO33Q7Z6M2 555 aa21.9■■□□□ 1.1
SDCBP2-201ENST00000339987 PLEKHM2Q8IWE5 1019 aa21.9■■□□□ 1.1
SDCBP2-201ENST00000339987 AOX1Q06278 1338 aa21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 NFKBIEO00221 500 aa21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 ZBTB22O15209 634 aa21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 WASHC4Q2M389 1173 aa21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 TXNRD3Q86VQ6 643 aa21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 ZNF512BQ96KM6 892 aaPredicted RBP21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 FAM84BQ96KN1 310 aaPredicted RBP21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 GPR101Q96P66 508 aaPredicted RBP21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 TAOK3Q9H2K8 898 aa21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 OSBPL3Q9H4L5 887 aa21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 ECHDC1Q9NTX5 307 aa21.89■■□□□ 1.1
SDCBP2-201ENST00000339987 PDE1AP54750 535 aa21.89■■□□□ 1.09
SDCBP2-201ENST00000339987 CCDC158Q5M9N0 1113 aa21.89■■□□□ 1.09
SDCBP2-201ENST00000339987 CCDC102BQ68D86 513 aa21.89■■□□□ 1.09
SDCBP2-201ENST00000339987 ZC3H12CQ9C0D7 883 aaKnown RBP21.89■■□□□ 1.09
SDCBP2-201ENST00000339987 YBX3P16989 372 aaKnown RBP eCLIP21.88■■□□□ 1.09
SDCBP2-201ENST00000339987 HIBADHP31937 336 aaKnown RBP21.88■■□□□ 1.09
SDCBP2-201ENST00000339987 PHKA1P46020 1223 aa21.88■■□□□ 1.09
SDCBP2-201ENST00000339987 GYG1P46976 350 aa21.88■■□□□ 1.09
SDCBP2-201ENST00000339987 BCAMP50895 628 aa21.88■■□□□ 1.09
SDCBP2-201ENST00000339987 KIAA2012Q0VF49 1180 aa21.88■■□□□ 1.09
SDCBP2-201ENST00000339987 ZNF804AQ7Z570 1209 aa21.88■■□□□ 1.09
SDCBP2-201ENST00000339987 UQCRFS1P1P0C7P4 283 aa21.87■■□□□ 1.09
SDCBP2-201ENST00000339987 ARID4AP29374 1257 aaPredicted RBP21.87■■□□□ 1.09
SDCBP2-201ENST00000339987 SKAP1Q86WV1 359 aa21.87■■□□□ 1.09
SDCBP2-201ENST00000339987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.87■■□□□ 1.09
SDCBP2-201ENST00000339987 RIMBP2O15034 1052 aa21.86■■□□□ 1.09
SDCBP2-201ENST00000339987 ERC2O15083 957 aa21.86■■□□□ 1.09
SDCBP2-201ENST00000339987 ATP5JP18859 108 aa21.86■■□□□ 1.09
SDCBP2-201ENST00000339987 TTC39AQ5SRH9 613 aa21.86■■□□□ 1.09
SDCBP2-201ENST00000339987 VPS37DQ86XT2 251 aa21.86■■□□□ 1.09
SDCBP2-201ENST00000339987 COA1Q9GZY4 146 aa21.86■■□□□ 1.09
SDCBP2-201ENST00000339987 GNL3LQ9NVN8 582 aaKnown RBP21.86■■□□□ 1.09
SDCBP2-201ENST00000339987 PELP1Q8IZL8 1130 aaKnown RBP21.85■■□□□ 1.09
SDCBP2-201ENST00000339987 PI4K2BQ8TCG2 481 aa21.85■■□□□ 1.09
SDCBP2-201ENST00000339987 SEMA3EO15041 775 aa21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 PPIP5K2O43314 1243 aa21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 GLRX3O76003 335 aaKnown RBP21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 IL1R1P14778 569 aa21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 IARSP41252 1262 aaKnown RBP21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 RGS3P49796 1198 aa21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 AOC3Q16853 763 aa21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 ARHGAP27Q6ZUM4 889 aa21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 CD209Q9NNX6 404 aa21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 ZNF277Q9NRM2 450 aaPredicted RBP21.84■■□□□ 1.09
SDCBP2-201ENST00000339987 GPR162Q16538 588 aa21.83■■□□□ 1.09
SDCBP2-201ENST00000339987 TSHZ3Q63HK5 1081 aa21.83■■□□□ 1.09
SDCBP2-201ENST00000339987 TDRD7Q8NHU6 1098 aaKnown RBP21.83■■□□□ 1.09
SDCBP2-201ENST00000339987 RASSF7Q02833 373 aa21.82■■□□□ 1.08
SDCBP2-201ENST00000339987 PDS5AQ29RF7 1337 aaKnown RBP21.82■■□□□ 1.08
SDCBP2-201ENST00000339987 GRIN3BO60391 1043 aa21.81■■□□□ 1.08
SDCBP2-201ENST00000339987 LARGE2Q8N3Y3 721 aa21.81■■□□□ 1.08
SDCBP2-201ENST00000339987 AKAP11Q9UKA4 1901 aa21.81■■□□□ 1.08
SDCBP2-201ENST00000339987 G3V3G9 751 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 MCAMP43121 646 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 RASGRF1Q13972 1273 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 SCARF1Q14162 830 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 DCAF8Q5TAQ9 597 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 PODNQ7Z5L7 613 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 HAUS7Q99871 368 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 BOLA2Q9H3K6 86 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 DENND2AQ9ULE3 1009 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 ECE2O60344 883 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 DOK7Q18PE1 504 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 TTC22Q5TAA0 569 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 HMG20BQ9P0W2 317 aa21.8■■□□□ 1.08
SDCBP2-201ENST00000339987 COL4A5P29400 1685 aa21.79■■□□□ 1.08
SDCBP2-201ENST00000339987 MYH13Q9UKX3 1938 aa21.79■■□□□ 1.08
SDCBP2-201ENST00000339987 COL1A1P02452 1464 aaPredicted RBP21.79■■□□□ 1.08
SDCBP2-201ENST00000339987 NIM1KQ8IY84 436 aa21.79■■□□□ 1.08
SDCBP2-201ENST00000339987 SPATA5Q8NB90 893 aa21.79■■□□□ 1.08
SDCBP2-201ENST00000339987 DBNDD1Q9H9R9 158 aa21.79■■□□□ 1.08
SDCBP2-201ENST00000339987 IQSEC3Q9UPP2 1182 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms