RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 GPC2Q8N158 579 aa15.95■□□□□ 0.14
SRSF3-201ENST00000339436 GPBP1L1Q9HC44 474 aaPredicted RBP15.95■□□□□ 0.14
SRSF3-201ENST00000339436 SUPT16HQ9Y5B9 1047 aaKnown RBP15.95■□□□□ 0.14
SRSF3-201ENST00000339436 DDNO94850 711 aaPredicted RBP15.94■□□□□ 0.14
SRSF3-201ENST00000339436 CXCL9Q07325 125 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 RPAP2Q8IXW5 612 aaPredicted RBP15.94■□□□□ 0.14
SRSF3-201ENST00000339436 L3MBTL3Q96JM7 780 aaPredicted RBP15.94■□□□□ 0.14
SRSF3-201ENST00000339436 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 ZNF609O15014 1411 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 G3V3G9 751 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 FGFR2P21802 821 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 SIRT2Q8IXJ6 389 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 COA1Q9GZY4 146 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 NMRK2Q9NPI5 230 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 CEP126Q9P2H0 1117 aa15.94■□□□□ 0.14
SRSF3-201ENST00000339436 RAD17O75943 681 aa15.93■□□□□ 0.14
SRSF3-201ENST00000339436 CIAPIN1Q6FI81 312 aa15.93■□□□□ 0.14
SRSF3-201ENST00000339436 PODNQ7Z5L7 613 aa15.93■□□□□ 0.14
SRSF3-201ENST00000339436 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
SRSF3-201ENST00000339436 HMMRO75330 724 aa15.92■□□□□ 0.14
SRSF3-201ENST00000339436 G3BP1Q13283 466 aaKnown RBP eCLIP15.92■□□□□ 0.14
SRSF3-201ENST00000339436 ATP2B3Q16720 1220 aa15.92■□□□□ 0.14
SRSF3-201ENST00000339436 ZNF804AQ7Z570 1209 aa15.92■□□□□ 0.14
SRSF3-201ENST00000339436 GJA3Q9Y6H8 435 aa15.92■□□□□ 0.14
SRSF3-201ENST00000339436 ADAMTSL1Q8N6G6 1762 aa15.91■□□□□ 0.14
SRSF3-201ENST00000339436 PSMD14O00487 310 aa15.91■□□□□ 0.14
SRSF3-201ENST00000339436 SURF6O75683 361 aaKnown RBP15.91■□□□□ 0.14
SRSF3-201ENST00000339436 SLC5A1P13866 664 aa15.91■□□□□ 0.14
SRSF3-201ENST00000339436 TNIP1Q15025 636 aa15.91■□□□□ 0.14
SRSF3-201ENST00000339436 LPIN2Q92539 896 aa15.91■□□□□ 0.14
SRSF3-201ENST00000339436 CD209Q9NNX6 404 aa15.91■□□□□ 0.14
SRSF3-201ENST00000339436 KCNQ5Q9NR82 932 aa15.91■□□□□ 0.14
SRSF3-201ENST00000339436 IFIT1P09914 478 aaKnown RBP15.9■□□□□ 0.14
SRSF3-201ENST00000339436 GYG1P46976 350 aa15.9■□□□□ 0.14
SRSF3-201ENST00000339436 SCNN1DP51172 638 aa15.9■□□□□ 0.14
SRSF3-201ENST00000339436 TFCP2Q12800 502 aa15.9■□□□□ 0.14
SRSF3-201ENST00000339436 OS9Q13438 667 aaPredicted RBP15.9■□□□□ 0.14
SRSF3-201ENST00000339436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
SRSF3-201ENST00000339436 POTECB2RU33 542 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 SASH1O94885 1247 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 IL1R1P14778 569 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 FAM84BQ96KN1 310 aaPredicted RBP15.89■□□□□ 0.13
SRSF3-201ENST00000339436 EXOC6BQ9Y2D4 811 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 AKAP11Q9UKA4 1901 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 IQCA1LA6NCM1 817 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 USP17L3A6NCW0 530 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 USP17L4A6NCW7 530 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 KIF3CO14782 793 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 HIBADHP31937 336 aaKnown RBP15.89■□□□□ 0.13
SRSF3-201ENST00000339436 GMPSP49915 693 aaPredicted RBP15.89■□□□□ 0.13
SRSF3-201ENST00000339436 USP17L1Q7RTZ2 530 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 FBXO33Q7Z6M2 555 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 RRAGCQ9HB90 399 aa15.89■□□□□ 0.13
SRSF3-201ENST00000339436 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
SRSF3-201ENST00000339436 A0A1B0GUL7 405 aa15.88■□□□□ 0.13
SRSF3-201ENST00000339436 VIL1P09327 827 aaKnown RBP15.88■□□□□ 0.13
SRSF3-201ENST00000339436 VEGFAP15692 232 aaPredicted RBP15.88■□□□□ 0.13
SRSF3-201ENST00000339436 CAVIN4Q5BKX8 364 aa15.88■□□□□ 0.13
SRSF3-201ENST00000339436 STRIP1Q5VSL9 837 aa15.88■□□□□ 0.13
SRSF3-201ENST00000339436 VPS37DQ86XT2 251 aa15.88■□□□□ 0.13
SRSF3-201ENST00000339436 AKAP2Q9Y2D5 859 aa15.88■□□□□ 0.13
SRSF3-201ENST00000339436 PCDHB15Q9Y5E8 787 aa15.88■□□□□ 0.13
SRSF3-201ENST00000339436 COL1A1P02452 1464 aaPredicted RBP15.87■□□□□ 0.13
SRSF3-201ENST00000339436 RPS12P25398 132 aaKnown RBP15.87■□□□□ 0.13
SRSF3-201ENST00000339436 LMOD1P29536 600 aaPredicted RBP15.87■□□□□ 0.13
SRSF3-201ENST00000339436 AAMPQ13685 434 aa15.87■□□□□ 0.13
SRSF3-201ENST00000339436 HSP90AB4PQ58FF6 505 aa15.87■□□□□ 0.13
SRSF3-201ENST00000339436 DACT2Q5SW24 774 aa15.87■□□□□ 0.13
SRSF3-201ENST00000339436 RSBN1LQ6PCB5 846 aaPredicted RBP15.87■□□□□ 0.13
SRSF3-201ENST00000339436 ERC1Q8IUD2 1116 aa15.87■□□□□ 0.13
SRSF3-201ENST00000339436 TDRD7Q8NHU6 1098 aaKnown RBP15.87■□□□□ 0.13
SRSF3-201ENST00000339436 GPRC5DQ9NZD1 345 aa15.87■□□□□ 0.13
SRSF3-201ENST00000339436 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
SRSF3-201ENST00000339436 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
SRSF3-201ENST00000339436 POLR2AP24928 1970 aaKnown RBP15.87■□□□□ 0.13
SRSF3-201ENST00000339436 ADORA1P30542 326 aa15.86■□□□□ 0.13
SRSF3-201ENST00000339436 BCAMP50895 628 aa15.86■□□□□ 0.13
SRSF3-201ENST00000339436 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
SRSF3-201ENST00000339436 GPR108Q9NPR9 543 aa15.86■□□□□ 0.13
SRSF3-201ENST00000339436 MYO3BQ8WXR4 1341 aa15.86■□□□□ 0.13
SRSF3-201ENST00000339436 TIMM10P62072 90 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 GTF2IP78347 998 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 TNNI3KQ59H18 835 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 TTLL5Q6EMB2 1281 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 AGBL3Q8NEM8 1001 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 EXOC6Q8TAG9 804 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 DPF2Q92785 391 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 FBXW7Q969H0 707 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 FPGT-TNNI3KV9GXZ4 949 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 FAM205AQ6ZU69 1335 aa15.85■□□□□ 0.13
SRSF3-201ENST00000339436 MYO5AQ9Y4I1 1855 aaKnown RBP15.84■□□□□ 0.13
SRSF3-201ENST00000339436 EPHX2P34913 555 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 XAGE2Q96GT9 111 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 GMLQ99445 158 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 SHTN1A0MZ66 631 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 EPS15P42566 896 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 PHKA1P46020 1223 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 MICALL2Q8IY33 904 aa15.84■□□□□ 0.13
SRSF3-201ENST00000339436 KIF1BPQ96EK5 621 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms