RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ABCC4O15439 1325 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 PLEKHG3A1L390 1219 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 RRAGBQ5VZM2 374 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 METTL22Q9BUU2 404 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 SRRTQ9BXP5 876 aaKnown RBP19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 DESP17661 470 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 RPS6KB1P23443 525 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 AFMP43652 599 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 PBRM1Q86U86 1689 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 PLXNC1O60486 1568 aa19.54■□□□□ 0.72
TRAPPC11-201ENST00000334690 AKR1B10O60218 316 aa19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 TRIM21P19474 475 aaKnown RBP19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 EXOC1Q9NV70 894 aa19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 CALCOCO1Q9P1Z2 691 aa19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 DNAI1Q9UI46 699 aa19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 EYA2O00167 538 aa19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 PSMA7O14818 248 aa19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 ZNF445P59923 1031 aa19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 ZRSR2Q15696 482 aaKnown RBP19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 SNX14Q9Y5W7 946 aa19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 POLR3GO15318 223 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 ENOX2Q16206 610 aaKnown RBP19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 UTP14AQ9BVJ6 771 aaKnown RBP19.53■□□□□ 0.72
TRAPPC11-201ENST00000334690 CPA1P15085 419 aa19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 STAT6P42226 847 aa19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 PLBD2Q8NHP8 589 aa19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 LLPHQ9BRT6 129 aaKnown RBP19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 PNMA6EA0A0J9YXQ4 647 aa19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 IRS4O14654 1257 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 CYLC1P35663 651 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 STXBP4Q6ZWJ1 553 aa19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 CHST3Q7LGC8 479 aa19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 IQSEC3Q9UPP2 1182 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 USP19O94966 1318 aa19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 DZIP3Q86Y13 1208 aaKnown RBP19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 NIP7Q9Y221 180 aaKnown RBP eCLIP19.52■□□□□ 0.72
TRAPPC11-201ENST00000334690 TCERG1LQ5VWI1 586 aa19.52■□□□□ 0.71
TRAPPC11-201ENST00000334690 RTL9Q8NET4 1388 aa19.52■□□□□ 0.71
TRAPPC11-201ENST00000334690 TSPY3P0CV98 308 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 TSPY8P0CW00 308 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 PRDM10Q9NQV6 1147 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 MBD5Q9P267 1494 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 ADGBQ8N7X0 1667 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 CABLES1Q8TDN4 633 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 SIRT1Q96EB6 747 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 RFC4P35249 363 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 FAM160A1Q05DH4 1040 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 TNNI3KQ59H18 835 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 TMX1Q9H3N1 280 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 FPGT-TNNI3KV9GXZ4 949 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 SLC27A2O14975 620 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 SLU7O95391 586 aaKnown RBP19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 ATP6V1AP38606 617 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 MATR3P43243 847 aaKnown RBP eCLIP19.51■□□□□ 0.712e-6■■■■□ 22
TRAPPC11-201ENST00000334690 SSR1P43307 286 aaKnown RBP19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 SETDB2Q96T68 719 aa19.51■□□□□ 0.71
TRAPPC11-201ENST00000334690 KAT6BQ8WYB5 2073 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 ATP10AO60312 1499 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 TRAF1Q13077 416 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 KRT222Q8N1A0 295 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 RBSNQ9H1K0 784 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 ARFGAP3Q9NP61 516 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 PCDH11XQ9BZA7 1347 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 PCDH11YQ9BZA8 1340 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 MAGEB6P1A0A0J9YX57 407 aa19.5■□□□□ 0.71
TRAPPC11-201ENST00000334690 CABP5Q9NP86 173 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 A0A1B0GUL7 405 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 DNA2P51530 1060 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 GTPBP4Q9BZE4 634 aaKnown RBP19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 TM6SF1Q9BZW5 370 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 PTGS1P23219 599 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 TIMM10P62072 90 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 DBNDD2Q9BQY9 259 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 JADE2Q9NQC1 790 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 MAGI2Q86UL8 1455 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 CCDC175P0C221 793 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 HSPA4P34932 840 aa19.49■□□□□ 0.71
TRAPPC11-201ENST00000334690 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 CKAP4Q07065 602 aaKnown RBP19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 ZSWIM4Q9H7M6 989 aa19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 ERMNQ8TAM6 284 aa19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 DHX58Q96C10 678 aa19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 IFFO1Q0D2I5 559 aa19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 DDB1Q16531 1140 aa19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 HSP90AA4PQ58FG1 418 aa19.48■□□□□ 0.71
TRAPPC11-201ENST00000334690 HLTFQ14527 1009 aaKnown RBP eCLIP19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 KBTBD3Q8NAB2 608 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 LGR6Q9HBX8 967 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 KRI1Q8N9T8 703 aaKnown RBP19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 FAM107BQ9H098 131 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 CTAGE15A4D2H0 777 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 CTAGE8P0CG41 777 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 GBP2P32456 591 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 TUBB4BP68371 445 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 IFI16Q16666 785 aaKnown RBP19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 CTAGE6Q86UF2 777 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms