RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 GPHNQ9NQX3 736 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-201ENST00000333371 TTLL5Q6EMB2 1281 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 TTLL7Q6ZT98 887 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 PLA2G4DQ86XP0 818 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 KBTBD3Q8NAB2 608 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 ABCA3Q99758 1704 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 PTPDC1A2A3K4 754 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 LRRC24Q50LG9 513 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 USP28Q96RU2 1077 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 CARD10Q9BWT7 1032 aa14.5□□□□□ -0.09
VPS33B-201ENST00000333371 ATG9AQ7Z3C6 839 aa14.49□□□□□ -0.09
VPS33B-201ENST00000333371 TDRD7Q8NHU6 1098 aaKnown RBP14.49□□□□□ -0.09
VPS33B-201ENST00000333371 CACTINQ8WUQ7 758 aaKnown RBP14.49□□□□□ -0.09
VPS33B-201ENST00000333371 NBPF26B4DH59 902 aa14.49□□□□□ -0.09
VPS33B-201ENST00000333371 FOXO4P98177 505 aa14.49□□□□□ -0.09
VPS33B-201ENST00000333371 NBPF14Q5TI25 921 aa14.49□□□□□ -0.09
VPS33B-201ENST00000333371 ZSCAN25Q6NSZ9 544 aa14.49□□□□□ -0.09
VPS33B-201ENST00000333371 NBPF10Q6P3W6 841 aaKnown RBP14.49□□□□□ -0.09
VPS33B-201ENST00000333371 CCAR1Q8IX12 1150 aaKnown RBP14.49□□□□□ -0.09
VPS33B-201ENST00000333371 NBPF15Q8N660 670 aa14.49□□□□□ -0.09
VPS33B-201ENST00000333371 SMARCC2Q8TAQ2 1214 aa14.49□□□□□ -0.09
VPS33B-201ENST00000333371 PAG1Q9NWQ8 432 aa14.49□□□□□ -0.09
VPS33B-201ENST00000333371 PFKFB2O60825 505 aa14.48□□□□□ -0.09
VPS33B-201ENST00000333371 OTUD7BQ6GQQ9 843 aa14.48□□□□□ -0.09
VPS33B-201ENST00000333371 MTERF4Q7Z6M4 381 aaKnown RBP14.48□□□□□ -0.09
VPS33B-201ENST00000333371 RAB11FIP4Q86YS3 637 aa14.48□□□□□ -0.09
VPS33B-201ENST00000333371 CCDC94Q9BW85 323 aaPredicted RBP14.48□□□□□ -0.09
VPS33B-201ENST00000333371 CLIP2Q9UDT6 1046 aa14.48□□□□□ -0.09
VPS33B-201ENST00000333371 LAMB4A4D0S4 1761 aa14.48□□□□□ -0.09
VPS33B-201ENST00000333371 ERVV-2B6SEH9 535 aa14.48□□□□□ -0.09
VPS33B-201ENST00000333371 CBX1P83916 185 aa14.48□□□□□ -0.09
VPS33B-201ENST00000333371 HSP90AB3PQ58FF7 597 aa14.48□□□□□ -0.09
VPS33B-201ENST00000333371 DHX32Q7L7V1 743 aaKnown RBP14.48□□□□□ -0.09
VPS33B-201ENST00000333371 PUS3Q9BZE2 481 aaKnown RBP14.48□□□□□ -0.09
VPS33B-201ENST00000333371 TPM3P06753 285 aa14.47□□□□□ -0.09
VPS33B-201ENST00000333371 PDIA4P13667 645 aaKnown RBP14.47□□□□□ -0.09
VPS33B-201ENST00000333371 NAA30Q147X3 362 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-201ENST00000333371 ATP2B3Q16720 1220 aa14.47□□□□□ -0.09
VPS33B-201ENST00000333371 PPP4R3BQ5MIZ7 849 aa14.47□□□□□ -0.09
VPS33B-201ENST00000333371 ZBTB3Q9H5J0 574 aa14.47□□□□□ -0.09
VPS33B-201ENST00000333371 E7EWF7 191 aa14.47□□□□□ -0.09
VPS33B-201ENST00000333371 HSPD1P10809 573 aaKnown RBP14.47□□□□□ -0.09
VPS33B-201ENST00000333371 HAND2P61296 217 aa14.47□□□□□ -0.09
VPS33B-201ENST00000333371 ILDR1Q86SU0 546 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-201ENST00000333371 CCDC85AQ96PX6 553 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-201ENST00000333371 TAOK2Q9UL54 1235 aa14.47□□□□□ -0.09
VPS33B-201ENST00000333371 A1BGP04217 495 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 IQCB1Q15051 598 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 CFAP45Q9UL16 551 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 MAST3O60307 1309 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 SH3TC1Q8TE82 1336 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 NHSL1Q5SYE7 1610 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 M0R2C6 588 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 CHAF1AQ13111 956 aaPredicted RBP14.46□□□□□ -0.09
VPS33B-201ENST00000333371 SNW1Q13573 536 aaKnown RBP14.46□□□□□ -0.09
VPS33B-201ENST00000333371 PLBD2Q8NHP8 589 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 ZSCAN16Q9H4T2 348 aaPredicted RBP14.46□□□□□ -0.09
VPS33B-201ENST00000333371 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
VPS33B-201ENST00000333371 EXOSC10Q01780 885 aaKnown RBP14.45□□□□□ -0.1
VPS33B-201ENST00000333371 USP27XA6NNY8 438 aa14.45□□□□□ -0.1
VPS33B-201ENST00000333371 PDIA3P30101 505 aaKnown RBP14.45□□□□□ -0.1
VPS33B-201ENST00000333371 ME1P48163 572 aa14.45□□□□□ -0.1
VPS33B-201ENST00000333371 ZMYM1Q5SVZ6 1142 aa14.45□□□□□ -0.1
VPS33B-201ENST00000333371 RCOR1Q9UKL0 485 aa14.45□□□□□ -0.1
VPS33B-201ENST00000333371 IFIT1P09914 478 aaKnown RBP14.44□□□□□ -0.1
VPS33B-201ENST00000333371 FKBP4Q02790 459 aaKnown RBP eCLIP14.44□□□□□ -0.1
VPS33B-201ENST00000333371 KLHL34Q8N239 644 aa14.44□□□□□ -0.1
VPS33B-201ENST00000333371 FSIP1Q8NA03 581 aa14.44□□□□□ -0.1
VPS33B-201ENST00000333371 A0A1B0GUL7 405 aa14.44□□□□□ -0.1
VPS33B-201ENST00000333371 GOLGA6L19H0YKK7 550 aa14.44□□□□□ -0.1
VPS33B-201ENST00000333371 H7C1W4 665 aa14.44□□□□□ -0.1
VPS33B-201ENST00000333371 TNNT1P13805 278 aa14.44□□□□□ -0.1
VPS33B-201ENST00000333371 FDPSP14324 419 aaKnown RBP14.44□□□□□ -0.1
VPS33B-201ENST00000333371 NKX1-1Q15270 411 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-201ENST00000333371 OSBP2Q969R2 916 aa14.44□□□□□ -0.1
VPS33B-201ENST00000333371 KAT6BQ8WYB5 2073 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 PALLDQ8WX93 1383 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 A0A1B0GVL5 298 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.1
VPS33B-201ENST00000333371 FILIP1Q7Z7B0 1213 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 ZNF592Q92610 1267 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 ZNF330Q9Y3S2 320 aaPredicted RBP14.43□□□□□ -0.1
VPS33B-201ENST00000333371 GLI3P10071 1580 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
VPS33B-201ENST00000333371 ADORA1P30542 326 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 NAA16Q6N069 864 aaPredicted RBP14.43□□□□□ -0.1
VPS33B-201ENST00000333371 PDCL2Q8N4E4 241 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 LLPHQ9BRT6 129 aaKnown RBP14.43□□□□□ -0.1
VPS33B-201ENST00000333371 HELLSQ9NRZ9 838 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 BTG4Q9NY30 223 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 SALL1Q9NSC2 1324 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 RFX7Q2KHR2 1363 aa14.43□□□□□ -0.1
VPS33B-201ENST00000333371 TPD52L1Q16890 204 aaPredicted RBP14.42□□□□□ -0.1
VPS33B-201ENST00000333371 PI16Q6UXB8 463 aa14.42□□□□□ -0.1
VPS33B-201ENST00000333371 CCDC73Q6ZRK6 1079 aa14.42□□□□□ -0.1
VPS33B-201ENST00000333371 DHX40Q8IX18 779 aaKnown RBP14.42□□□□□ -0.1
VPS33B-201ENST00000333371 ENGASEQ8NFI3 743 aa14.42□□□□□ -0.1
VPS33B-201ENST00000333371 DSCC1Q9BVC3 393 aa14.42□□□□□ -0.1
VPS33B-201ENST00000333371 CWC25Q9NXE8 425 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms