RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 MAGEA9P43362 315 aa21.16■□□□□ 0.98
SOCS3-201ENST00000330871 ADGRL3Q9HAR2 1447 aa21.15■□□□□ 0.98
SOCS3-201ENST00000330871 EIF3CLB5ME19 914 aaKnown RBP21.15■□□□□ 0.98
SOCS3-201ENST00000330871 GPR161Q8N6U8 529 aaKnown RBP21.15■□□□□ 0.98
SOCS3-201ENST00000330871 EIF3CQ99613 913 aaKnown RBP21.15■□□□□ 0.98
SOCS3-201ENST00000330871 NAT10Q9H0A0 1025 aaKnown RBP21.15■□□□□ 0.98
SOCS3-201ENST00000330871 ADAMTS13Q76LX8 1427 aa21.15■□□□□ 0.98
SOCS3-201ENST00000330871 MMP14P50281 582 aa21.15■□□□□ 0.98
SOCS3-201ENST00000330871 MCM6Q14566 821 aa21.15■□□□□ 0.98
SOCS3-201ENST00000330871 LONRF2Q1L5Z9 754 aa21.15■□□□□ 0.98
SOCS3-201ENST00000330871 IQUBQ8NA54 791 aa21.15■□□□□ 0.98
SOCS3-201ENST00000330871 ZSWIM4Q9H7M6 989 aa21.15■□□□□ 0.98
SOCS3-201ENST00000330871 BRMS1Q9HCU9 246 aa21.15■□□□□ 0.98
SOCS3-201ENST00000330871 BIN1O00499 593 aa21.14■□□□□ 0.98
SOCS3-201ENST00000330871 PDE11AQ9HCR9 933 aa21.14■□□□□ 0.98
SOCS3-201ENST00000330871 TUBB4AP04350 444 aa21.14■□□□□ 0.97
SOCS3-201ENST00000330871 FSIP1Q8NA03 581 aa21.14■□□□□ 0.97
SOCS3-201ENST00000330871 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.97
SOCS3-201ENST00000330871 PLEKHA4Q9H4M7 779 aa21.14■□□□□ 0.97
SOCS3-201ENST00000330871 PTPRUQ92729 1446 aa21.14■□□□□ 0.97
SOCS3-201ENST00000330871 TSPOAP1O95153 1857 aa21.14■□□□□ 0.97
SOCS3-201ENST00000330871 PPFIA3O75145 1194 aa21.13■□□□□ 0.97
SOCS3-201ENST00000330871 GIGYF1O75420 1035 aaPredicted RBP21.13■□□□□ 0.97
SOCS3-201ENST00000330871 PSMA5P28066 241 aa21.13■□□□□ 0.97
SOCS3-201ENST00000330871 PPP2R3AQ06190 1150 aa21.13■□□□□ 0.97
SOCS3-201ENST00000330871 OS9Q13438 667 aaPredicted RBP21.13■□□□□ 0.97
SOCS3-201ENST00000330871 SDF4Q9BRK5 362 aa21.13■□□□□ 0.97
SOCS3-201ENST00000330871 WDR24Q96S15 920 aa21.13■□□□□ 0.97
SOCS3-201ENST00000330871 N4BP1O75113 896 aaKnown RBP21.13■□□□□ 0.97
SOCS3-201ENST00000330871 RPS6KB1P23443 525 aa21.13■□□□□ 0.97
SOCS3-201ENST00000330871 ADD1P35611 737 aaKnown RBP21.13■□□□□ 0.97
SOCS3-201ENST00000330871 CLASRPQ8N2M8 674 aaKnown RBP21.13■□□□□ 0.97
SOCS3-201ENST00000330871 MYCNP04198 464 aaPredicted RBP21.12■□□□□ 0.97
SOCS3-201ENST00000330871 IVLP07476 585 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 LMOD1P29536 600 aaPredicted RBP21.12■□□□□ 0.97
SOCS3-201ENST00000330871 KCNJ6P48051 423 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 BEND3Q5T5X7 828 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 NBPF6Q5VWK0 638 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 ENGASEQ8NFI3 743 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 NBPF4Q96M43 638 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 USP28Q96RU2 1077 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 APPP05067 770 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 ATP2B1P20020 1258 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 ME1P48163 572 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 FAM160A1Q05DH4 1040 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 EP400NLQ6ZTU2 488 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 DNAAF4Q8WXU2 420 aa21.12■□□□□ 0.97
SOCS3-201ENST00000330871 EIF2S2P20042 333 aaKnown RBP21.11■□□□□ 0.97
SOCS3-201ENST00000330871 ANKRD1Q15327 319 aa21.11■□□□□ 0.97
SOCS3-201ENST00000330871 GNG11P61952 73 aa21.11■□□□□ 0.97
SOCS3-201ENST00000330871 NMIQ13287 307 aaPredicted RBP21.11■□□□□ 0.97
SOCS3-201ENST00000330871 ISM2Q6H9L7 571 aa21.11■□□□□ 0.97
SOCS3-201ENST00000330871 MAP4K1Q92918 833 aa21.11■□□□□ 0.97
SOCS3-201ENST00000330871 VWA3AA6NCI4 1184 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 ATP1A3P13637 1013 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 HOXC9P31274 260 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 RSRC2Q7L4I2 434 aaKnown RBP21.1■□□□□ 0.97
SOCS3-201ENST00000330871 SIL1Q9H173 461 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 DEF6Q9H4E7 631 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 ECHDC1Q9NTX5 307 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 TNRQ92752 1358 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 A0A1B0GVL5 298 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 PI4KAP2A4QPH2 592 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 NLRP6P59044 892 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 ZRSR1Q15695 479 aaKnown RBP21.1■□□□□ 0.97
SOCS3-201ENST00000330871 SKIDA1Q1XH10 827 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 PI4KAP1Q8N8J0 262 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 RCOR1Q9UKL0 485 aa21.1■□□□□ 0.97
SOCS3-201ENST00000330871 KIF13AQ9H1H9 1805 aa21.09■□□□□ 0.97
SOCS3-201ENST00000330871 CCP110O43303 1012 aa21.09■□□□□ 0.97
SOCS3-201ENST00000330871 WWC2Q6AWC2 1192 aa21.09■□□□□ 0.97
SOCS3-201ENST00000330871 RNF216Q9NWF9 866 aaPredicted RBP21.09■□□□□ 0.97
SOCS3-201ENST00000330871 FAN1Q9Y2M0 1017 aa21.09■□□□□ 0.97
SOCS3-201ENST00000330871 HSP90B1P14625 803 aaKnown RBP21.09■□□□□ 0.97
SOCS3-201ENST00000330871 MAP3K9P80192 1104 aa21.09■□□□□ 0.97
SOCS3-201ENST00000330871 APOBRQ0VD83 1088 aa21.09■□□□□ 0.97
SOCS3-201ENST00000330871 GPATCH3Q96I76 525 aa21.09■□□□□ 0.97
SOCS3-201ENST00000330871 ZSCAN16Q9H4T2 348 aaPredicted RBP21.09■□□□□ 0.97
SOCS3-201ENST00000330871 PHACTR2O75167 634 aa21.08■□□□□ 0.97
SOCS3-201ENST00000330871 SUGCTQ9HAC7 445 aa21.08■□□□□ 0.97
SOCS3-201ENST00000330871 CRYBG1Q9Y4K1 1723 aa21.08■□□□□ 0.97
SOCS3-201ENST00000330871 CT47A1Q5JQC4 288 aaPredicted RBP21.08■□□□□ 0.96
SOCS3-201ENST00000330871 MAP2K7O14733 419 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 HOXB7P09629 217 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 FANCCQ00597 558 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 MTX1Q13505 466 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 DPF2Q92785 391 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 EVI5LQ96CN4 794 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 MRFAP1Q9Y605 127 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 GUCY1B3Q02153 619 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 PSME1Q06323 249 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 RABGGTAQ92696 567 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 DHX58Q96C10 678 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 LRRC2Q9BYS8 371 aa21.07■□□□□ 0.96
SOCS3-201ENST00000330871 EIF4A1P60842 406 aaKnown RBP21.06■□□□□ 0.96
SOCS3-201ENST00000330871 PPM1EQ8WY54 764 aa21.06■□□□□ 0.96
SOCS3-201ENST00000330871 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
SOCS3-201ENST00000330871 A0A0D9SFI3 127 aa21.06■□□□□ 0.96
SOCS3-201ENST00000330871 GOLGA1Q92805 767 aa21.06■□□□□ 0.96
SOCS3-201ENST00000330871 PPP2R2CQ9Y2T4 447 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms