RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 MASTLQ96GX5 879 aa15.46■□□□□ 0.07
DDX39A-202ENST00000324340 DLEC1Q9Y238 1755 aa15.45■□□□□ 0.06
DDX39A-202ENST00000324340 ZBTB22O15209 634 aa15.45■□□□□ 0.06
DDX39A-202ENST00000324340 TTC39AQ5SRH9 613 aa15.45■□□□□ 0.06
DDX39A-202ENST00000324340 CCDC102BQ68D86 513 aa15.45■□□□□ 0.06
DDX39A-202ENST00000324340 SNAP23O00161 211 aa15.44■□□□□ 0.06
DDX39A-202ENST00000324340 RRP9O43818 475 aaKnown RBP15.44■□□□□ 0.06
DDX39A-202ENST00000324340 UQCRFS1P1P0C7P4 283 aa15.44■□□□□ 0.06
DDX39A-202ENST00000324340 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
DDX39A-202ENST00000324340 STYK1Q6J9G0 422 aa15.44■□□□□ 0.06
DDX39A-202ENST00000324340 MTFR1LQ9H019 292 aa15.44■□□□□ 0.06
DDX39A-202ENST00000324340 ZNF804BA4D1E1 1349 aa15.44■□□□□ 0.06
DDX39A-202ENST00000324340 IRS2Q9Y4H2 1338 aa15.44■□□□□ 0.06
DDX39A-202ENST00000324340 PHKA1P46020 1223 aa15.43■□□□□ 0.06
DDX39A-202ENST00000324340 SP8Q8IXZ3 490 aa15.43■□□□□ 0.06
DDX39A-202ENST00000324340 PAG1Q9NWQ8 432 aa15.43■□□□□ 0.06
DDX39A-202ENST00000324340 PODXL2Q9NZ53 605 aa15.43■□□□□ 0.06
DDX39A-202ENST00000324340 LEMD3Q9Y2U8 911 aa15.43■□□□□ 0.06
DDX39A-202ENST00000324340 XDHP47989 1333 aa15.43■□□□□ 0.06
DDX39A-202ENST00000324340 H0YIN7 160 aa15.42■□□□□ 0.06
DDX39A-202ENST00000324340 HIP1O00291 1037 aa15.42■□□□□ 0.06
DDX39A-202ENST00000324340 PPEF1O14829 653 aaPredicted RBP15.42■□□□□ 0.06
DDX39A-202ENST00000324340 MCAMP43121 646 aa15.42■□□□□ 0.06
DDX39A-202ENST00000324340 SCARF1Q14162 830 aa15.42■□□□□ 0.06
DDX39A-202ENST00000324340 C15orf52Q6ZUT6 534 aaKnown RBP15.42■□□□□ 0.06
DDX39A-202ENST00000324340 C2CD5Q86YS7 1000 aa15.42■□□□□ 0.06
DDX39A-202ENST00000324340 KBTBD3Q8NAB2 608 aa15.42■□□□□ 0.06
DDX39A-202ENST00000324340 DNAJC2Q99543 621 aaKnown RBP15.42■□□□□ 0.06
DDX39A-202ENST00000324340 ESYT1Q9BSJ8 1104 aa15.42■□□□□ 0.06
DDX39A-202ENST00000324340 UPF2Q9HAU5 1272 aaKnown RBP15.42■□□□□ 0.06
DDX39A-202ENST00000324340 ATP6V0A2Q9Y487 856 aa15.42■□□□□ 0.06
DDX39A-202ENST00000324340 WTIPA6NIX2 430 aaPredicted RBP15.41■□□□□ 0.06
DDX39A-202ENST00000324340 MFAP1P55081 439 aaKnown RBP15.41■□□□□ 0.06
DDX39A-202ENST00000324340 R3HDM1Q15032 1099 aaKnown RBP15.41■□□□□ 0.06
DDX39A-202ENST00000324340 EDC3Q96F86 508 aaKnown RBP15.41■□□□□ 0.06
DDX39A-202ENST00000324340 FSD1Q9BTV5 496 aa15.41■□□□□ 0.06
DDX39A-202ENST00000324340 NDUFB9Q9Y6M9 179 aa15.41■□□□□ 0.06
DDX39A-202ENST00000324340 ATP2B4P23634 1241 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 KCNJ4P48050 445 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 BCAMP50895 628 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 GPSM2P81274 684 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 FBXO33Q7Z6M2 555 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 TBC1D32Q96NH3 1257 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 SNRKQ9NRH2 765 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 ANKIB1Q9P2G1 1089 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 KIAA1551Q9HCM1 1747 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 DOCK2Q92608 1830 aa15.4■□□□□ 0.06
DDX39A-202ENST00000324340 GOLIM4O00461 696 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 SGSM2O43147 1006 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 EPB41L2O43491 1005 aaKnown RBP15.39■□□□□ 0.05
DDX39A-202ENST00000324340 REC8O95072 547 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 ZBTB7AO95365 584 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 ZAP70P43403 619 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 SLC51AQ86UW1 340 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 RUFY2Q8WXA3 655 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 CNKSR1Q969H4 720 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 FAM84BQ96KN1 310 aaPredicted RBP15.39■□□□□ 0.05
DDX39A-202ENST00000324340 SGIP1Q9BQI5 828 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 HMG20BQ9P0W2 317 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 PDS5AQ29RF7 1337 aaKnown RBP15.39■□□□□ 0.05
DDX39A-202ENST00000324340 CACNA1SQ13698 1873 aa15.39■□□□□ 0.05
DDX39A-202ENST00000324340 SEMA3EO15041 775 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 GYG1P46976 350 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 RBM25P49756 843 aaKnown RBP15.38■□□□□ 0.05
DDX39A-202ENST00000324340 FKBP4Q02790 459 aaKnown RBP eCLIP15.38■□□□□ 0.05
DDX39A-202ENST00000324340 RASGRF1Q13972 1273 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 TTF1Q15361 905 aaPredicted RBP15.38■□□□□ 0.05
DDX39A-202ENST00000324340 SPATA5Q8NB90 893 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 ANTXR1Q9H6X2 564 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 DIAPH3Q9NSV4 1193 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 GNL3LQ9NVN8 582 aaKnown RBP15.38■□□□□ 0.05
DDX39A-202ENST00000324340 RAD50Q92878 1312 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 DUOX1Q9NRD9 1551 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 SLX4Q8IY92 1834 aa15.38■□□□□ 0.05
DDX39A-202ENST00000324340 CYP2E1P05181 493 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-202ENST00000324340 KLRK1P26718 216 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 POLD1P28340 1107 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 CHRNA5P30532 468 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 PI16Q6UXB8 463 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 ZNF622Q969S3 477 aaKnown RBP eCLIP15.37■□□□□ 0.051e-9■□□□□ 10.8
DDX39A-202ENST00000324340 USP26Q9BXU7 913 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 C22orf23Q9BZE7 217 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 IL25Q9H293 177 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 GGA1Q9UJY5 639 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 NSFL1CQ9UNZ2 370 aaKnown RBP15.37■□□□□ 0.05
DDX39A-202ENST00000324340 MYH7P12883 1935 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 MED23Q9ULK4 1368 aa15.37■□□□□ 0.05
DDX39A-202ENST00000324340 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
DDX39A-202ENST00000324340 LRRFIP1Q32MZ4 808 aaKnown RBP15.36■□□□□ 0.05
DDX39A-202ENST00000324340 PRPF40BQ6NWY9 871 aaKnown RBP15.36■□□□□ 0.05
DDX39A-202ENST00000324340 CWC27Q6UX04 472 aaKnown RBP15.36■□□□□ 0.05
DDX39A-202ENST00000324340 TBC1D16Q8TBP0 767 aa15.36■□□□□ 0.05
DDX39A-202ENST00000324340 MYH13Q9UKX3 1938 aa15.36■□□□□ 0.05
DDX39A-202ENST00000324340 COL1A1P02452 1464 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-202ENST00000324340 SNED1Q8TER0 1413 aa15.36■□□□□ 0.05
DDX39A-202ENST00000324340 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-202ENST00000324340 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-202ENST00000324340 TXNRD3Q86VQ6 643 aa15.36■□□□□ 0.05
DDX39A-202ENST00000324340 C7orf43Q8WVR3 580 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms