RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.12
TPM3-204ENST00000323144 GMLQ99445 158 aa15.77■□□□□ 0.12
TPM3-204ENST00000323144 LAMB1P07942 1786 aa15.77■□□□□ 0.11
TPM3-204ENST00000323144 AKAP11Q9UKA4 1901 aa15.76■□□□□ 0.11
TPM3-204ENST00000323144 ZNF280AP59817 542 aaPredicted RBP15.76■□□□□ 0.11
TPM3-204ENST00000323144 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
TPM3-204ENST00000323144 FBXW7Q969H0 707 aa15.76■□□□□ 0.11
TPM3-204ENST00000323144 ZIC5Q96T25 663 aa15.76■□□□□ 0.11
TPM3-204ENST00000323144 SCAF8Q9UPN6 1271 aaKnown RBP15.76■□□□□ 0.11
TPM3-204ENST00000323144 MYH13Q9UKX3 1938 aa15.76■□□□□ 0.11
TPM3-204ENST00000323144 CASP8AP2Q9UKL3 1982 aa15.75■□□□□ 0.11
TPM3-204ENST00000323144 USP17L3A6NCW0 530 aa15.75■□□□□ 0.11
TPM3-204ENST00000323144 USP17L4A6NCW7 530 aa15.75■□□□□ 0.11
TPM3-204ENST00000323144 IGHMBP2P38935 993 aaKnown RBP15.75■□□□□ 0.11
TPM3-204ENST00000323144 HUNKP57058 714 aa15.75■□□□□ 0.11
TPM3-204ENST00000323144 BEND3Q5T5X7 828 aa15.75■□□□□ 0.11
TPM3-204ENST00000323144 ANGEL2Q5VTE6 544 aaKnown RBP15.75■□□□□ 0.11
TPM3-204ENST00000323144 USP17L1Q7RTZ2 530 aa15.75■□□□□ 0.11
TPM3-204ENST00000323144 CDCA5Q96FF9 252 aa15.75■□□□□ 0.11
TPM3-204ENST00000323144 IRS2Q9Y4H2 1338 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 SNAP23O00161 211 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 CSF1RP07333 972 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 FOXO4P98177 505 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 EPHA10Q5JZY3 1008 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 DACT2Q5SW24 774 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 AGBL3Q8NEM8 1001 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 DCPSQ96C86 337 aaKnown RBP15.74■□□□□ 0.11
TPM3-204ENST00000323144 HHIPL1Q96JK4 782 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 GBA2Q9HCG7 927 aaPredicted RBP15.74■□□□□ 0.11
TPM3-204ENST00000323144 MYOZ2Q9NPC6 264 aa15.74■□□□□ 0.11
TPM3-204ENST00000323144 ZNF804BA4D1E1 1349 aa15.73■□□□□ 0.11
TPM3-204ENST00000323144 CHRNDQ07001 517 aa15.73■□□□□ 0.11
TPM3-204ENST00000323144 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
TPM3-204ENST00000323144 SASH1O94885 1247 aa15.72■□□□□ 0.11
TPM3-204ENST00000323144 USP17L8P0C7I0 530 aa15.72■□□□□ 0.11
TPM3-204ENST00000323144 BRPF1P55201 1214 aaPredicted RBP15.72■□□□□ 0.11
TPM3-204ENST00000323144 SCARF1Q14162 830 aa15.72■□□□□ 0.11
TPM3-204ENST00000323144 PODNQ7Z5L7 613 aa15.72■□□□□ 0.11
TPM3-204ENST00000323144 SULF1Q8IWU6 871 aa15.72■□□□□ 0.11
TPM3-204ENST00000323144 CHMP3Q9Y3E7 222 aa15.72■□□□□ 0.11
TPM3-204ENST00000323144 SSC5DA1L4H1 1573 aa15.71■□□□□ 0.11
TPM3-204ENST00000323144 ANKRD18BA2A2Z9 1011 aa15.71■□□□□ 0.11
TPM3-204ENST00000323144 MAP2K2P36507 400 aa15.71■□□□□ 0.11
TPM3-204ENST00000323144 HELBQ8NG08 1087 aaPredicted RBP15.71■□□□□ 0.11
TPM3-204ENST00000323144 MPHOSPH8Q99549 860 aa15.71■□□□□ 0.11
TPM3-204ENST00000323144 PITPNM2Q9BZ72 1349 aa15.7■□□□□ 0.1
TPM3-204ENST00000323144 GRM8O00222 908 aa15.7■□□□□ 0.1
TPM3-204ENST00000323144 TAF5LO75529 589 aa15.7■□□□□ 0.1
TPM3-204ENST00000323144 NBPF9Q3BBW0 867 aa15.7■□□□□ 0.1
TPM3-204ENST00000323144 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
TPM3-204ENST00000323144 ZNF594Q96JF6 807 aaPredicted RBP15.7■□□□□ 0.1
TPM3-204ENST00000323144 BEGAINQ9BUH8 593 aa15.7■□□□□ 0.1
TPM3-204ENST00000323144 COA1Q9GZY4 146 aa15.7■□□□□ 0.1
TPM3-204ENST00000323144 LEMD3Q9Y2U8 911 aa15.7■□□□□ 0.1
TPM3-204ENST00000323144 MYO3BQ8WXR4 1341 aa15.69■□□□□ 0.1
TPM3-204ENST00000323144 SLC10A3P09131 477 aa15.69■□□□□ 0.1
TPM3-204ENST00000323144 KCNJ4P48050 445 aa15.69■□□□□ 0.1
TPM3-204ENST00000323144 NOGQ13253 232 aa15.69■□□□□ 0.1
TPM3-204ENST00000323144 SLC4A10Q6U841 1118 aa15.69■□□□□ 0.1
TPM3-204ENST00000323144 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
TPM3-204ENST00000323144 MOB2Q70IA6 237 aa15.69■□□□□ 0.1
TPM3-204ENST00000323144 ANKRD2Q9GZV1 360 aa15.69■□□□□ 0.1
TPM3-204ENST00000323144 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
TPM3-204ENST00000323144 STRIP1Q5VSL9 837 aa15.68■□□□□ 0.1
TPM3-204ENST00000323144 PRAMEF18Q5VWM3 479 aa15.68■□□□□ 0.1
TPM3-204ENST00000323144 RASAL3Q86YV0 1011 aa15.68■□□□□ 0.1
TPM3-204ENST00000323144 KIAA0825Q8IV33 1275 aa15.68■□□□□ 0.1
TPM3-204ENST00000323144 CERS5Q8N5B7 392 aa15.68■□□□□ 0.1
TPM3-204ENST00000323144 C2orf69Q8N8R5 385 aa15.68■□□□□ 0.1
TPM3-204ENST00000323144 SUCLG2Q96I99 432 aa15.68■□□□□ 0.1
TPM3-204ENST00000323144 COL1A1P02452 1464 aaPredicted RBP15.67■□□□□ 0.1
TPM3-204ENST00000323144 WNT10BO00744 389 aa15.67■□□□□ 0.1
TPM3-204ENST00000323144 GTF2IP78347 998 aa15.67■□□□□ 0.1
TPM3-204ENST00000323144 ABHD8Q96I13 439 aa15.67■□□□□ 0.1
TPM3-204ENST00000323144 KAZALD1Q96I82 304 aa15.67■□□□□ 0.1
TPM3-204ENST00000323144 JAG2Q9Y219 1238 aa15.67■□□□□ 0.1
TPM3-204ENST00000323144 PCDHAC2Q9Y5I4 1007 aa15.67■□□□□ 0.1
TPM3-204ENST00000323144 AOX1Q06278 1338 aa15.67■□□□□ 0.1
TPM3-204ENST00000323144 ZNF157P51786 506 aaPredicted RBP15.66■□□□□ 0.1
TPM3-204ENST00000323144 SRCIN1Q9C0H9 1055 aa15.66■□□□□ 0.1
TPM3-204ENST00000323144 CD209Q9NNX6 404 aa15.66■□□□□ 0.1
TPM3-204ENST00000323144 ALDH1L1O75891 902 aa15.65■□□□□ 0.1
TPM3-204ENST00000323144 KIF23Q02241 960 aaPredicted RBP15.65■□□□□ 0.1
TPM3-204ENST00000323144 MRPL50Q8N5N7 158 aaKnown RBP15.65■□□□□ 0.1
TPM3-204ENST00000323144 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
TPM3-204ENST00000323144 CA12O43570 354 aa15.64■□□□□ 0.09
TPM3-204ENST00000323144 NBPF7P0C2Y1 421 aaPredicted RBP15.64■□□□□ 0.09
TPM3-204ENST00000323144 TAF7LQ5H9L4 462 aa15.64■□□□□ 0.09
TPM3-204ENST00000323144 TTLL5Q6EMB2 1281 aa15.64■□□□□ 0.09
TPM3-204ENST00000323144 ZBED3Q96IU2 234 aaPredicted RBP15.64■□□□□ 0.09
TPM3-204ENST00000323144 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.09
TPM3-204ENST00000323144 PLIN1O60240 522 aa15.63■□□□□ 0.09
TPM3-204ENST00000323144 CCDC57Q2TAC2 916 aa15.63■□□□□ 0.09
TPM3-204ENST00000323144 C15orf52Q6ZUT6 534 aaKnown RBP15.63■□□□□ 0.09
TPM3-204ENST00000323144 ZNF804AQ7Z570 1209 aa15.63■□□□□ 0.09
TPM3-204ENST00000323144 OGFOD1Q8N543 542 aa15.63■□□□□ 0.09
TPM3-204ENST00000323144 ANKRD44Q8N8A2 993 aa15.63■□□□□ 0.09
TPM3-204ENST00000323144 BICC1Q9H694 974 aaKnown RBP15.63■□□□□ 0.09
TPM3-204ENST00000323144 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
TPM3-204ENST00000323144 UTYO14607 1347 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms