RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CCDC102BQ68D86 513 aa19■□□□□ 0.63
PACS1-201ENST00000320580 KCNG4Q8TDN1 519 aa19■□□□□ 0.63
PACS1-201ENST00000320580 DESI2Q9BSY9 194 aa19■□□□□ 0.63
PACS1-201ENST00000320580 CEP83Q9Y592 693 aa19■□□□□ 0.63
PACS1-201ENST00000320580 PNMA6EA0A0J9YXQ4 647 aa19■□□□□ 0.63
PACS1-201ENST00000320580 DDX58O95786 925 aaKnown RBP19■□□□□ 0.63
PACS1-201ENST00000320580 JADE2Q9NQC1 790 aa19■□□□□ 0.63
PACS1-201ENST00000320580 PPP2R2CQ9Y2T4 447 aa19■□□□□ 0.63
PACS1-201ENST00000320580 SPTLC2O15270 562 aa19■□□□□ 0.63
PACS1-201ENST00000320580 LARGE1O95461 756 aa19■□□□□ 0.63
PACS1-201ENST00000320580 G2E3Q7L622 706 aa19■□□□□ 0.63
PACS1-201ENST00000320580 RAB11FIP4Q86YS3 637 aa19■□□□□ 0.63
PACS1-201ENST00000320580 MUM1L1Q5H9M0 696 aa19■□□□□ 0.63
PACS1-201ENST00000320580 JPH2Q9BR39 696 aaPredicted RBP19■□□□□ 0.63
PACS1-201ENST00000320580 HYPKQ9NX55 129 aa19■□□□□ 0.63
PACS1-201ENST00000320580 MTX1Q13505 466 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 BCCIPQ9P287 314 aaKnown RBP eCLIP18.99■□□□□ 0.63
PACS1-201ENST00000320580 HSF2BPO75031 334 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 PLA2G4AP47712 749 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 PIP4K2AP48426 406 aaPredicted RBP18.99■□□□□ 0.63
PACS1-201ENST00000320580 NMIQ13287 307 aaPredicted RBP18.99■□□□□ 0.63
PACS1-201ENST00000320580 A0A0G2JS52 829 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 GOLGA8FQ08AF8 430 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 GOLGA8DPQ0D2H9 430 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 NME9Q86XW9 330 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 BCAS4Q8TDM0 211 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
PACS1-201ENST00000320580 HMG20BQ9P0W2 317 aa18.99■□□□□ 0.63
PACS1-201ENST00000320580 POLR1AO95602 1720 aaPredicted RBP18.99■□□□□ 0.63
PACS1-201ENST00000320580 CCDC151A5D8V7 595 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 FAM71BQ8TC56 605 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 YY1AP1Q9H869 796 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 CCDC121Q6ZUS5 278 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 B4GALNT4Q76KP1 1039 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 RIC3Q7Z5B4 369 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 TADA2BQ86TJ2 420 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 TPCN1Q9ULQ1 816 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 OPA1O60313 960 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 CXorf56Q9H5V9 222 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 POLKQ9UBT6 870 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 PHLPP2Q6ZVD8 1323 aa18.98■□□□□ 0.63
PACS1-201ENST00000320580 STIM1Q13586 685 aa18.97■□□□□ 0.63
PACS1-201ENST00000320580 MAGEC2Q9UBF1 373 aaPredicted RBP18.97■□□□□ 0.63
PACS1-201ENST00000320580 GUCA1BQ9UMX6 200 aa18.97■□□□□ 0.63
PACS1-201ENST00000320580 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
PACS1-201ENST00000320580 DNA2P51530 1060 aa18.97■□□□□ 0.63
PACS1-201ENST00000320580 TTC41PQ6P2S7 1318 aa18.97■□□□□ 0.63
PACS1-201ENST00000320580 PTPN21Q16825 1174 aa18.97■□□□□ 0.63
PACS1-201ENST00000320580 ZNF330Q9Y3S2 320 aaPredicted RBP18.97■□□□□ 0.63
PACS1-201ENST00000320580 ARAP3Q8WWN8 1544 aa18.97■□□□□ 0.63
PACS1-201ENST00000320580 MYO6Q9UM54 1294 aa18.97■□□□□ 0.63
PACS1-201ENST00000320580 U3KPZ7 1027 aaPredicted RBP18.97■□□□□ 0.63
PACS1-201ENST00000320580 PTPDC1A2A3K4 754 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 ADKP55263 362 aaKnown RBP18.96■□□□□ 0.63
PACS1-201ENST00000320580 HECW2Q9P2P5 1572 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 SOS1Q07889 1333 aaPredicted RBP18.96■□□□□ 0.63
PACS1-201ENST00000320580 CFAP74Q9C0B2 1584 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 MAATS1Q7Z4T9 603 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 FAM212AQ96EL1 285 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 AMOTL2Q9Y2J4 779 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 SSH2Q76I76 1423 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 APOBRQ0VD83 1088 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 FHOD1Q9Y613 1164 aa18.96■□□□□ 0.63
PACS1-201ENST00000320580 YEATS4O95619 227 aa18.95■□□□□ 0.62
PACS1-201ENST00000320580 ADCK5Q3MIX3 580 aa18.95■□□□□ 0.62
PACS1-201ENST00000320580 PLEKHF1Q96S99 279 aa18.95■□□□□ 0.62
PACS1-201ENST00000320580 FRMD3A2A2Y4 597 aa18.95■□□□□ 0.62
PACS1-201ENST00000320580 HMGB1P09429 215 aaKnown RBP18.95■□□□□ 0.62
PACS1-201ENST00000320580 VEZTQ9HBM0 779 aa18.95■□□□□ 0.62
PACS1-201ENST00000320580 CCDC196A0A1B0GTZ2 297 aa18.95■□□□□ 0.62
PACS1-201ENST00000320580 PAFAH1B1P43034 410 aa18.95■□□□□ 0.62
PACS1-201ENST00000320580 SSR1P43307 286 aaKnown RBP18.95■□□□□ 0.62
PACS1-201ENST00000320580 NAPGQ99747 312 aaPredicted RBP18.95■□□□□ 0.62
PACS1-201ENST00000320580 OSBPL3Q9H4L5 887 aa18.95■□□□□ 0.62
PACS1-201ENST00000320580 CKAP4Q07065 602 aaKnown RBP18.94■□□□□ 0.62
PACS1-201ENST00000320580 PPFIA4O75335 1185 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 RPS6KB1P23443 525 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 PTH1RQ03431 593 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 FMNL3Q8IVF7 1028 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 KIAA1468Q9P260 1216 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 N4BP3O15049 544 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 TAX1BP1Q86VP1 789 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 PROSER2Q86WR7 435 aaPredicted RBP18.94■□□□□ 0.62
PACS1-201ENST00000320580 DHX58Q96C10 678 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 RSRC1Q96IZ7 334 aaKnown RBP18.94■□□□□ 0.62
PACS1-201ENST00000320580 MED4Q9NPJ6 270 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 RIMS2Q9UQ26 1411 aa18.94■□□□□ 0.62
PACS1-201ENST00000320580 AKR1B15C9JRZ8 316 aaPredicted RBP18.93■□□□□ 0.62
PACS1-201ENST00000320580 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 CCDC47Q96A33 483 aaKnown RBP18.93■□□□□ 0.62
PACS1-201ENST00000320580 SLC27A2O14975 620 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 NLRP12P59046 1061 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 PPARDQ03181 441 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 IMMTQ16891 758 aaKnown RBP18.93■□□□□ 0.62
PACS1-201ENST00000320580 FKBP15Q5T1M5 1219 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 WWC2Q6AWC2 1192 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 NUDT16Q96DE0 195 aaKnown RBP18.93■□□□□ 0.62
PACS1-201ENST00000320580 CPSF2Q9P2I0 782 aaKnown RBP18.93■□□□□ 0.62
PACS1-201ENST00000320580 FAM135BQ49AJ0 1406 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms