RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 WBP1LQ9NX94 342 aa22.46■■□□□ 1.19
TPM1-203ENST00000317516 EGFRP00533 1210 aa22.45■■□□□ 1.18
TPM1-203ENST00000317516 SULF1Q8IWU6 871 aa22.45■■□□□ 1.18
TPM1-203ENST00000317516 HHIPL1Q96JK4 782 aa22.45■■□□□ 1.18
TPM1-203ENST00000317516 PTPRCP08575 1304 aa22.44■■□□□ 1.18
TPM1-203ENST00000317516 CTCFP49711 727 aaPredicted RBP22.44■■□□□ 1.18
TPM1-203ENST00000317516 MMP14P50281 582 aa22.44■■□□□ 1.18
TPM1-203ENST00000317516 GRM1Q13255 1194 aa22.44■■□□□ 1.18
TPM1-203ENST00000317516 STRIP1Q5VSL9 837 aa22.44■■□□□ 1.18
TPM1-203ENST00000317516 CYP4F22Q6NT55 531 aa22.44■■□□□ 1.18
TPM1-203ENST00000317516 OGFOD1Q8N543 542 aa22.44■■□□□ 1.18
TPM1-203ENST00000317516 MRPL50Q8N5N7 158 aaKnown RBP22.44■■□□□ 1.18
TPM1-203ENST00000317516 GMLQ99445 158 aa22.44■■□□□ 1.18
TPM1-203ENST00000317516 ZNF609O15014 1411 aa22.43■■□□□ 1.18
TPM1-203ENST00000317516 MYO3BQ8WXR4 1341 aa22.43■■□□□ 1.18
TPM1-203ENST00000317516 FOXN1O15353 648 aa22.43■■□□□ 1.18
TPM1-203ENST00000317516 TNS4Q8IZW8 715 aa22.43■■□□□ 1.18
TPM1-203ENST00000317516 FBXW7Q969H0 707 aa22.43■■□□□ 1.18
TPM1-203ENST00000317516 BEGAINQ9BUH8 593 aa22.43■■□□□ 1.18
TPM1-203ENST00000317516 PCNTO95613 3336 aa22.43■■□□□ 1.18
TPM1-203ENST00000317516 MAP2K2P36507 400 aa22.42■■□□□ 1.18
TPM1-203ENST00000317516 SCARF1Q14162 830 aa22.42■■□□□ 1.18
TPM1-203ENST00000317516 TTLL5Q6EMB2 1281 aa22.42■■□□□ 1.18
TPM1-203ENST00000317516 LDHAL6AQ6ZMR3 332 aa22.42■■□□□ 1.18
TPM1-203ENST00000317516 TXNRD3Q86VQ6 643 aa22.42■■□□□ 1.18
TPM1-203ENST00000317516 MYOZ2Q9NPC6 264 aa22.42■■□□□ 1.18
TPM1-203ENST00000317516 GGA3Q9NZ52 723 aa22.42■■□□□ 1.18
TPM1-203ENST00000317516 EPHA10Q5JZY3 1008 aa22.41■■□□□ 1.18
TPM1-203ENST00000317516 DACT2Q5SW24 774 aa22.41■■□□□ 1.18
TPM1-203ENST00000317516 C2orf69Q8N8R5 385 aa22.41■■□□□ 1.18
TPM1-203ENST00000317516 CNNM1Q9NRU3 951 aa22.41■■□□□ 1.18
TPM1-203ENST00000317516 ALDH1L2Q3SY69 923 aa22.4■■□□□ 1.18
TPM1-203ENST00000317516 SSH1Q8WYL5 1049 aa22.4■■□□□ 1.18
TPM1-203ENST00000317516 PRDM10Q9NQV6 1147 aa22.4■■□□□ 1.18
TPM1-203ENST00000317516 MYH3P11055 1940 aa22.39■■□□□ 1.18
TPM1-203ENST00000317516 TAF5LO75529 589 aa22.39■■□□□ 1.17
TPM1-203ENST00000317516 C15orf52Q6ZUT6 534 aaKnown RBP22.39■■□□□ 1.17
TPM1-203ENST00000317516 HELBQ8NG08 1087 aaPredicted RBP22.39■■□□□ 1.17
TPM1-203ENST00000317516 UTYO14607 1347 aa22.38■■□□□ 1.17
TPM1-203ENST00000317516 ADM5C9JUS6 153 aa22.38■■□□□ 1.17
TPM1-203ENST00000317516 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
TPM1-203ENST00000317516 HUNKP57058 714 aa22.38■■□□□ 1.17
TPM1-203ENST00000317516 ANGEL2Q5VTE6 544 aaKnown RBP22.38■■□□□ 1.17
TPM1-203ENST00000317516 CDCA7LQ96GN5 454 aa22.38■■□□□ 1.17
TPM1-203ENST00000317516 SUCLG2Q96I99 432 aa22.38■■□□□ 1.17
TPM1-203ENST00000317516 GBA2Q9HCG7 927 aaPredicted RBP22.38■■□□□ 1.17
TPM1-203ENST00000317516 CD209Q9NNX6 404 aa22.38■■□□□ 1.17
TPM1-203ENST00000317516 HDAC9Q9UKV0 1011 aa22.38■■□□□ 1.17
TPM1-203ENST00000317516 NBPF7P0C2Y1 421 aaPredicted RBP22.37■■□□□ 1.17
TPM1-203ENST00000317516 KLRK1P26718 216 aa22.37■■□□□ 1.17
TPM1-203ENST00000317516 GTF2IP78347 998 aa22.37■■□□□ 1.17
TPM1-203ENST00000317516 ZNF804AQ7Z570 1209 aa22.37■■□□□ 1.17
TPM1-203ENST00000317516 ZNF594Q96JF6 807 aaPredicted RBP22.37■■□□□ 1.17
TPM1-203ENST00000317516 PITPNM2Q9BZ72 1349 aa22.36■■□□□ 1.17
TPM1-203ENST00000317516 PLIN1O60240 522 aa22.36■■□□□ 1.17
TPM1-203ENST00000317516 DLK2Q6UY11 383 aa22.36■■□□□ 1.17
TPM1-203ENST00000317516 TRMT2AQ8IZ69 625 aaKnown RBP22.36■■□□□ 1.17
TPM1-203ENST00000317516 MXD3Q9BW11 206 aa22.36■■□□□ 1.17
TPM1-203ENST00000317516 SCN9AQ15858 1988 aa22.36■■□□□ 1.17
TPM1-203ENST00000317516 ASTN2O75129 1339 aaPredicted RBP22.35■■□□□ 1.17
TPM1-203ENST00000317516 SMC4Q9NTJ3 1288 aa22.35■■□□□ 1.17
TPM1-203ENST00000317516 SNAP23O00161 211 aa22.34■■□□□ 1.17
TPM1-203ENST00000317516 AOC2O75106 756 aa22.34■■□□□ 1.17
TPM1-203ENST00000317516 LBX1P52954 281 aa22.34■■□□□ 1.17
TPM1-203ENST00000317516 NOGQ13253 232 aa22.34■■□□□ 1.17
TPM1-203ENST00000317516 CDCA5Q96FF9 252 aa22.34■■□□□ 1.17
TPM1-203ENST00000317516 KAZALD1Q96I82 304 aa22.34■■□□□ 1.17
TPM1-203ENST00000317516 TRPM7Q96QT4 1865 aa22.34■■□□□ 1.17
TPM1-203ENST00000317516 IL1R1P14778 569 aa22.33■■□□□ 1.17
TPM1-203ENST00000317516 UBE4AQ14139 1066 aa22.33■■□□□ 1.17
TPM1-203ENST00000317516 RABL6Q3YEC7 729 aaPredicted RBP22.33■■□□□ 1.17
TPM1-203ENST00000317516 RGMBQ6NW40 437 aa22.33■■□□□ 1.17
TPM1-203ENST00000317516 KIAA0825Q8IV33 1275 aa22.33■■□□□ 1.17
TPM1-203ENST00000317516 CCDC102AQ96A19 550 aa22.33■■□□□ 1.17
TPM1-203ENST00000317516 BICC1Q9H694 974 aaKnown RBP22.33■■□□□ 1.17
TPM1-203ENST00000317516 WNT10BO00744 389 aa22.32■■□□□ 1.16
TPM1-203ENST00000317516 CA12O43570 354 aa22.32■■□□□ 1.16
TPM1-203ENST00000317516 NBPF9Q3BBW0 867 aa22.32■■□□□ 1.16
TPM1-203ENST00000317516 MROH5Q6ZUA9 1318 aa22.31■■□□□ 1.16
TPM1-203ENST00000317516 IRS2Q9Y4H2 1338 aa22.31■■□□□ 1.16
TPM1-203ENST00000317516 HSPA8P11142 646 aaKnown RBP22.31■■□□□ 1.16
TPM1-203ENST00000317516 BRPF1P55201 1214 aaPredicted RBP22.31■■□□□ 1.16
TPM1-203ENST00000317516 FKBP1BP68106 108 aa22.31■■□□□ 1.16
TPM1-203ENST00000317516 USP44Q9H0E7 712 aa22.31■■□□□ 1.16
TPM1-203ENST00000317516 ZNF157P51786 506 aaPredicted RBP22.3■■□□□ 1.16
TPM1-203ENST00000317516 FKBP1AP62942 108 aaKnown RBP22.3■■□□□ 1.16
TPM1-203ENST00000317516 RIPOR2Q9Y4F9 1068 aa22.3■■□□□ 1.16
TPM1-203ENST00000317516 SASH1O94885 1247 aa22.29■■□□□ 1.16
TPM1-203ENST00000317516 PUS3Q9BZE2 481 aaKnown RBP22.29■■□□□ 1.16
TPM1-203ENST00000317516 HIBADHP31937 336 aaKnown RBP22.28■■□□□ 1.16
TPM1-203ENST00000317516 NF2P35240 595 aa22.28■■□□□ 1.16
TPM1-203ENST00000317516 DLGAP5Q15398 846 aa22.28■■□□□ 1.16
TPM1-203ENST00000317516 ANKRD44Q8N8A2 993 aa22.28■■□□□ 1.16
TPM1-203ENST00000317516 API5Q9BZZ5 524 aaKnown RBP22.28■■□□□ 1.16
TPM1-203ENST00000317516 HDAC5Q9UQL6 1122 aa22.28■■□□□ 1.16
TPM1-203ENST00000317516 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
TPM1-203ENST00000317516 APOBEC3FQ8IUX4 373 aaKnown RBP22.27■■□□□ 1.16
TPM1-203ENST00000317516 NOB1Q9ULX3 412 aaKnown RBP22.27■■□□□ 1.16
TPM1-203ENST00000317516 METTL24Q5JXM2 366 aa22.26■■□□□ 1.15
TPM1-203ENST00000317516 VPS37DQ86XT2 251 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms