RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 SPHKAPQ2M3C7 1700 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ABCA9Q8IUA7 1624 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 LDHBP07195 334 aaKnown RBP14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 DHX32Q7L7V1 743 aaKnown RBP14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.79□□□□□ -0.043e-24■□□□□ 9.1
SH3PXD2A-201ENST00000315994 KDRP35968 1356 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PNMA6EA0A0J9YXQ4 647 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 EPB41L2O43491 1005 aaKnown RBP14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PPFIA3O75145 1194 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RNF17Q9BXT8 1623 aaKnown RBP14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 TRAF1Q13077 416 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 FKBP15Q5T1M5 1219 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 MIGA1Q8NAN2 632 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CCDC112Q8NEF3 446 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 MATR3P43243 847 aaKnown RBP eCLIP14.78□□□□□ -0.041e-6■■□□□ 11.7
SH3PXD2A-201ENST00000315994 ARHGEF25Q86VW2 580 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 KCNG4Q8TDN1 519 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 USP21Q9UK80 565 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 A2ML1A8K2U0 1454 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CAVIN2O95810 425 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 HCLS1P14317 486 aaPredicted RBP14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 SFPQP23246 707 aaKnown RBP eCLIP14.78□□□□□ -0.046e-7■■■■□ 19.6
SH3PXD2A-201ENST00000315994 TIMM10P62072 90 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RBM10P98175 930 aaKnown RBP14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PICALMQ13492 652 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RBM27Q9P2N5 1060 aaKnown RBP14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PRR36Q9H6K5 1346 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 TRPM1Q7Z4N2 1603 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 F13A1P00488 732 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 POLD1P28340 1107 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 XAGE2Q96GT9 111 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 NEURL1BA8MQ27 555 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CCDC102BQ68D86 513 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 OTUD7AQ8TE49 926 aaPredicted RBP14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 INTS4Q96HW7 963 aaKnown RBP14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 DBNDD2Q9BQY9 259 aa14.78□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ESPNB1AK53 854 aa14.77□□□□□ -0.04
SH3PXD2A-201ENST00000315994 KLHDC4Q8TBB5 520 aa14.77□□□□□ -0.04
SH3PXD2A-201ENST00000315994 MCM9Q9NXL9 1143 aa14.77□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ERBB4Q15303 1308 aa14.77□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CDC42BPBQ9Y5S2 1711 aa14.77□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ANKARQ7Z5J8 1434 aa14.77□□□□□ -0.05
SH3PXD2A-201ENST00000315994 UBA7P41226 1012 aa14.77□□□□□ -0.05
SH3PXD2A-201ENST00000315994 CDK12Q9NYV4 1490 aaPredicted RBP14.77□□□□□ -0.05
SH3PXD2A-201ENST00000315994 CCDC181Q5TID7 509 aa14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 PPP4R3AQ6IN85 833 aa14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 ZSCAN30Q86W11 494 aa14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 KCNQ3O43525 872 aa14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 LRRC27Q9C0I9 530 aa14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 ZNF594Q96JF6 807 aaPredicted RBP14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 MROH5Q6ZUA9 1318 aa14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 TOP1P11387 765 aaKnown RBP14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 TCIRG1Q13488 830 aa14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 CNPY2Q9Y2B0 182 aa14.76□□□□□ -0.05
SH3PXD2A-201ENST00000315994 MBD4O95243 580 aa14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 TRMT2AQ8IZ69 625 aaKnown RBP14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 CLIP2Q9UDT6 1046 aa14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 APOBRQ0VD83 1088 aa14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 LPIN2Q92539 896 aa14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 SEC24BO95487 1268 aa14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 HIBADHP31937 336 aaKnown RBP14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 FAM177A1Q8N128 213 aaPredicted RBP14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 SEPT11Q9NVA2 429 aaKnown RBP14.75□□□□□ -0.05
SH3PXD2A-201ENST00000315994 UVSSAQ2YD98 709 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 KIAA1328Q86T90 577 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 SYKP43405 635 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 ARHGAP29Q52LW3 1261 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 CARD10Q9BWT7 1032 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 RIMBP2O15034 1052 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 ZSCAN23Q3MJ62 389 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 HEATR3Q7Z4Q2 680 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 USP48Q86UV5 1035 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 APPBP2Q92624 585 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 KIF2AO00139 706 aaPredicted RBP14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 ZSCAN12O43309 604 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 TRIM21P19474 475 aaKnown RBP14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 UBA5Q9GZZ9 404 aa14.74□□□□□ -0.05
SH3PXD2A-201ENST00000315994 IQCEQ6IPM2 695 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 CHST3Q7LGC8 479 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 STK32BQ9NY57 414 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 USP25Q9UHP3 1055 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 GLI2P10070 1586 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 BIN1O00499 593 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 UFL1O94874 794 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 RAB3GAP1Q15042 981 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 KBTBD3Q8NAB2 608 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 MRPS27Q92552 414 aaKnown RBP14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 USP44Q9H0E7 712 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 KAT6BQ8WYB5 2073 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 PTPDC1A2A3K4 754 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 SGSM2O43147 1006 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 RPS6KB1P23443 525 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 CALML3P27482 149 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 ZNF165P49910 485 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 PANK2Q9BZ23 570 aa14.73□□□□□ -0.05
SH3PXD2A-201ENST00000315994 SLC27A2O14975 620 aa14.72□□□□□ -0.05
SH3PXD2A-201ENST00000315994 WDR78Q5VTH9 848 aa14.72□□□□□ -0.05
SH3PXD2A-201ENST00000315994 SSH3Q8TE77 659 aa14.72□□□□□ -0.05
SH3PXD2A-201ENST00000315994 RBM28Q9NW13 759 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms