RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 TPCN1Q9ULQ1 816 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 MYO5AQ9Y4I1 1855 aaKnown RBP8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 COL5A3P25940 1745 aaPredicted RBP8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 MCM4P33991 863 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 EVX2Q03828 476 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 ZNF827Q17R98 1081 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 CCDC83Q8IWF9 413 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 AK7Q96M32 723 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 GDPD2Q9HCC8 539 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 HMG20BQ9P0W2 317 aa8.41□□□□□ -1.06
LYSMD3-201ENST00000315948 ME3Q16798 604 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 MCMDC2Q4G0Z9 681 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 MSL1Q68DK7 614 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 CNTNAP4Q9C0A0 1308 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 HSPD1P10809 573 aaKnown RBP8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 RAB3GAP1Q15042 981 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 SLC9C2Q5TAH2 1124 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 RUFY2Q8WXA3 655 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 SPEF2Q9C093 1822 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 ANKRD36CQ5JPF3 1778 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 CARMIL3Q8ND23 1372 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 FGFR2P21802 821 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 CCDC152Q4G0S7 254 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 ADGRA1Q86SQ6 560 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 MIGA1Q8NAN2 632 aa8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 PDGFDQ9GZP0 370 aaPredicted RBP8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 RGS17Q9UGC6 210 aaPredicted RBP8.4□□□□□ -1.06
LYSMD3-201ENST00000315948 FOSBP53539 338 aa8.4□□□□□ -1.07
LYSMD3-201ENST00000315948 SLC4A8Q2Y0W8 1093 aa8.4□□□□□ -1.07
LYSMD3-201ENST00000315948 ZMYM1Q5SVZ6 1142 aa8.4□□□□□ -1.07
LYSMD3-201ENST00000315948 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.07
LYSMD3-201ENST00000315948 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.07
LYSMD3-201ENST00000315948 DDX60Q8IY21 1712 aaKnown RBP8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 RNF113AO15541 343 aaKnown RBP8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 PRKAB2O43741 272 aa8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 GPR108Q9NPR9 543 aa8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 PDRG1Q9NUG6 133 aa8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 PUM3Q15397 648 aaKnown RBP8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 PARP10Q53GL7 1025 aa8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 ZNF652Q9Y2D9 606 aa8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 BRWD3Q6RI45 1802 aa8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 TOB2Q14106 344 aaPredicted RBP8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 AKAP2Q9Y2D5 859 aa8.39□□□□□ -1.07
LYSMD3-201ENST00000315948 KDM4AO75164 1064 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 TM4SF1P30408 202 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 IGHMBP2P38935 993 aaKnown RBP8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 ANAPC15P60006 121 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 TXNRD1Q16881 649 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 ZSWIM6Q9HCJ5 1215 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 ABCF2Q9UG63 623 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 ZNF532Q9HCE3 1301 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 MYH3P11055 1940 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 GYS1P13807 737 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 MCTP1Q6DN14 999 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 FAM173BQ6P4H8 233 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 POTEAQ6S8J7 498 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 COL1A1P02452 1464 aaPredicted RBP8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 DDR1Q08345 913 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 CLEC4GQ6UXB4 293 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 MAGEB6Q8N7X4 407 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 SPATA5Q8NB90 893 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 LPIN2Q92539 896 aa8.38□□□□□ -1.07
LYSMD3-201ENST00000315948 GPAA1O43292 621 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 APBA3O96018 575 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 FGAP02671 866 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 NCOA5Q9HCD5 579 aaKnown RBP8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 CYP46A1Q9Y6A2 500 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 SBF2Q86WG5 1849 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 JAK2O60674 1132 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 ZKSCAN1P17029 563 aaPredicted RBP8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 ANKRD18AQ8IVF6 992 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 ZNF384Q8TF68 577 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 ARMT1Q9H993 441 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 PDE6AP16499 860 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 SENP2Q9HC62 589 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 NAP1L2Q9ULW6 460 aaPredicted RBP8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 RPAP1Q9BWH6 1393 aaPredicted RBP8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 AKAP11Q9UKA4 1901 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 BAG4O95429 457 aaKnown RBP8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 APPP05067 770 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 GRIK5Q16478 980 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 PRR5LQ6MZQ0 368 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 NHSQ6T4R5 1651 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 RREB1Q92766 1687 aa8.37□□□□□ -1.07
LYSMD3-201ENST00000315948 CUL4AQ13619 759 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 RC3H1Q5TC82 1133 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 Q6ZUG5 572 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 FERMT3Q86UX7 667 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 BRF1Q92994 677 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 C4BP0C0L5 1744 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 MROH5Q6ZUA9 1318 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 RXRAP19793 462 aa8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 RPS8P62241 208 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 CCT2P78371 535 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 CHAF1AQ13111 956 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-201ENST00000315948 BLOC1S2Q6QNY1 142 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms