RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TPM4P67936 248 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 PDE4CQ08493 712 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 FMR1NBQ8N0W7 255 aaPredicted RBP17.06■□□□□ 0.32
COL6A2-202ENST00000310645 SMARCC2Q8TAQ2 1214 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 UTP14AQ9BVJ6 771 aaKnown RBP17.06■□□□□ 0.32
COL6A2-202ENST00000310645 TRIM34Q9BYJ4 488 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 PFKFB2O60825 505 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
COL6A2-202ENST00000310645 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 SLC3A2P08195 630 aaKnown RBP17.05■□□□□ 0.32
COL6A2-202ENST00000310645 CCDC93Q567U6 631 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 HSP90AA4PQ58FG1 418 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 ORC3Q9UBD5 711 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-202ENST00000310645 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
COL6A2-202ENST00000310645 PSDA5PKW4 1024 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-202ENST00000310645 MYL6BP14649 208 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 SNRKQ9NRH2 765 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-202ENST00000310645 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 RICTORQ6R327 1708 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 ST5P78524 1137 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 USPL1Q5W0Q7 1092 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 LRRC59Q96AG4 307 aaKnown RBP17.05■□□□□ 0.32
COL6A2-202ENST00000310645 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
COL6A2-202ENST00000310645 SERPINC1P01008 464 aa17.04■□□□□ 0.32
COL6A2-202ENST00000310645 TFCP2Q12800 502 aa17.04■□□□□ 0.32
COL6A2-202ENST00000310645 EPHA10Q5JZY3 1008 aa17.04■□□□□ 0.32
COL6A2-202ENST00000310645 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
COL6A2-202ENST00000310645 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
COL6A2-202ENST00000310645 ZFP91Q96JP5 570 aaPredicted RBP17.04■□□□□ 0.32
COL6A2-202ENST00000310645 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
COL6A2-202ENST00000310645 GYS2P54840 703 aa17.04■□□□□ 0.32
COL6A2-202ENST00000310645 FANCCQ00597 558 aa17.04■□□□□ 0.32
COL6A2-202ENST00000310645 MCMDC2Q4G0Z9 681 aa17.04■□□□□ 0.32
COL6A2-202ENST00000310645 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
COL6A2-202ENST00000310645 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
COL6A2-202ENST00000310645 DBNDD2Q9BQY9 259 aa17.03■□□□□ 0.32
COL6A2-202ENST00000310645 TECPR2O15040 1411 aa17.03■□□□□ 0.32
COL6A2-202ENST00000310645 HOXB7P09629 217 aa17.03■□□□□ 0.32
COL6A2-202ENST00000310645 LTKP29376 864 aa17.03■□□□□ 0.32
COL6A2-202ENST00000310645 EVCP57679 992 aa17.03■□□□□ 0.32
COL6A2-202ENST00000310645 LLPHQ9BRT6 129 aaKnown RBP17.03■□□□□ 0.32
COL6A2-202ENST00000310645 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
COL6A2-202ENST00000310645 ADALQ6DHV7 355 aa17.02■□□□□ 0.32
COL6A2-202ENST00000310645 KRBA2Q6ZNG9 492 aa17.02■□□□□ 0.32
COL6A2-202ENST00000310645 DPF2Q92785 391 aa17.02■□□□□ 0.32
COL6A2-202ENST00000310645 SMARCE1Q969G3 411 aa17.02■□□□□ 0.32
COL6A2-202ENST00000310645 NEUROD6Q96NK8 337 aa17.02■□□□□ 0.32
COL6A2-202ENST00000310645 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.31
COL6A2-202ENST00000310645 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.31
COL6A2-202ENST00000310645 OAS2P29728 719 aaKnown RBP17.02■□□□□ 0.31
COL6A2-202ENST00000310645 MARCKSP29966 332 aaPredicted RBP17.02■□□□□ 0.31
COL6A2-202ENST00000310645 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.31
COL6A2-202ENST00000310645 UBASH3AP57075 661 aa17.02■□□□□ 0.31
COL6A2-202ENST00000310645 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.31
COL6A2-202ENST00000310645 PDILTQ8N807 584 aa17.02■□□□□ 0.31
COL6A2-202ENST00000310645 ZSWIM4Q9H7M6 989 aa17.02■□□□□ 0.31
COL6A2-202ENST00000310645 ZNF609O15014 1411 aa17.01■□□□□ 0.31
COL6A2-202ENST00000310645 ZNF202O95125 648 aa17.01■□□□□ 0.31
COL6A2-202ENST00000310645 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
COL6A2-202ENST00000310645 KCND1Q9NSA2 647 aa17.01■□□□□ 0.31
COL6A2-202ENST00000310645 MYD88Q99836 296 aa17.01■□□□□ 0.31
COL6A2-202ENST00000310645 ZRANB2O95218 330 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL6A2-202ENST00000310645 SIPA1L2Q9P2F8 1722 aaPredicted RBP17■□□□□ 0.31
COL6A2-202ENST00000310645 GOLIM4O00461 696 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 SPTLC2O15270 562 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 IGKV5-2P06315 115 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 ATP5JP18859 108 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 TNNI3KQ59H18 835 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 LINC00301Q8NCQ3 95 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 FMN2Q9NZ56 1722 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 FANCGO15287 622 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 SASH3O75995 380 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 PDIA3P30101 505 aaKnown RBP17■□□□□ 0.31
COL6A2-202ENST00000310645 GNG11P61952 73 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 NEXNQ0ZGT2 675 aa17■□□□□ 0.31
COL6A2-202ENST00000310645 CHD2O14647 1828 aaKnown RBP17■□□□□ 0.31
COL6A2-202ENST00000310645 TADA3O75528 432 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 TNNT3P45378 269 aaPredicted RBP16.99■□□□□ 0.31
COL6A2-202ENST00000310645 NLRP12P59046 1061 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 C8orf76Q96K31 380 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 TULP2O00295 520 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 TTLL5Q6EMB2 1281 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 TRIM65Q6PJ69 517 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 TMEM232C9JQI7 657 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 HAND2P61296 217 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 NCAPHQ15003 741 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 RTEL1Q9NZ71 1219 aa16.99■□□□□ 0.31
COL6A2-202ENST00000310645 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
COL6A2-202ENST00000310645 SMC1AQ14683 1233 aaKnown RBP16.98■□□□□ 0.31
COL6A2-202ENST00000310645 CREBRFQ8IUR6 639 aa16.98■□□□□ 0.31
COL6A2-202ENST00000310645 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
COL6A2-202ENST00000310645 TOP1P11387 765 aaKnown RBP16.98■□□□□ 0.31
COL6A2-202ENST00000310645 FDPSP14324 419 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms