RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 KIAA1524Q8TCG1 905 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 OSBP2Q969R2 916 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 DRC7Q8IY82 874 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 DSCC1Q9BVC3 393 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 RNF113AO15541 343 aaKnown RBP17.79■□□□□ 0.44
CSDC2-201ENST00000306149 ZNF165P49910 485 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 RAB11FIP4Q86YS3 637 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 TRIM5Q9C035 493 aa17.79■□□□□ 0.44
CSDC2-201ENST00000306149 HMGB1P09429 215 aaKnown RBP17.78■□□□□ 0.44
CSDC2-201ENST00000306149 LRMPQ12912 555 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 RBM43Q6ZSC3 357 aaKnown RBP17.78■□□□□ 0.44
CSDC2-201ENST00000306149 CCDC191Q8NCU4 936 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 USP28Q96RU2 1077 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 ZSCAN16Q9H4T2 348 aaPredicted RBP17.78■□□□□ 0.44
CSDC2-201ENST00000306149 CFAP45Q9UL16 551 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 GLI3P10071 1580 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 GORABQ5T7V8 394 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 OTUD7BQ6GQQ9 843 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 PI16Q6UXB8 463 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 CCDC186Q7Z3E2 898 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 CADPS2Q86UW7 1296 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 ERCC4Q92889 916 aaPredicted RBP17.78■□□□□ 0.44
CSDC2-201ENST00000306149 CEP126Q9P2H0 1117 aa17.78■□□□□ 0.44
CSDC2-201ENST00000306149 PDIA3P30101 505 aaKnown RBP17.77■□□□□ 0.44
CSDC2-201ENST00000306149 SCARF1Q14162 830 aa17.77■□□□□ 0.44
CSDC2-201ENST00000306149 SYNE4Q8N205 404 aa17.77■□□□□ 0.44
CSDC2-201ENST00000306149 FAM89AQ96GI7 184 aa17.77■□□□□ 0.44
CSDC2-201ENST00000306149 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
CSDC2-201ENST00000306149 PCDH11XQ9BZA7 1347 aa17.77■□□□□ 0.44
CSDC2-201ENST00000306149 PCDH11YQ9BZA8 1340 aa17.77■□□□□ 0.44
CSDC2-201ENST00000306149 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.43
CSDC2-201ENST00000306149 GOLPH3LQ9H4A5 285 aa17.77■□□□□ 0.43
CSDC2-201ENST00000306149 FBXW7Q969H0 707 aa17.76■□□□□ 0.43
CSDC2-201ENST00000306149 LLPHQ9BRT6 129 aaKnown RBP17.76■□□□□ 0.43
CSDC2-201ENST00000306149 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
CSDC2-201ENST00000306149 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
CSDC2-201ENST00000306149 CCDC57Q2TAC2 916 aa17.76■□□□□ 0.43
CSDC2-201ENST00000306149 TAOK2Q9UL54 1235 aa17.76■□□□□ 0.43
CSDC2-201ENST00000306149 ABCC6O95255 1503 aa17.75■□□□□ 0.43
CSDC2-201ENST00000306149 TTC39AQ5SRH9 613 aa17.75■□□□□ 0.43
CSDC2-201ENST00000306149 XAGE2Q96GT9 111 aa17.75■□□□□ 0.43
CSDC2-201ENST00000306149 PKD1L3Q7Z443 1732 aa17.75■□□□□ 0.43
CSDC2-201ENST00000306149 WDR17Q8IZU2 1322 aa17.75■□□□□ 0.43
CSDC2-201ENST00000306149 NAA16Q6N069 864 aaPredicted RBP17.74■□□□□ 0.43
CSDC2-201ENST00000306149 C11orf57Q6ZUT1 292 aaPredicted RBP17.74■□□□□ 0.43
CSDC2-201ENST00000306149 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
CSDC2-201ENST00000306149 ERVV-2B6SEH9 535 aa17.74■□□□□ 0.43
CSDC2-201ENST00000306149 FOXP2O15409 715 aa17.74■□□□□ 0.43
CSDC2-201ENST00000306149 FDPSP14324 419 aaKnown RBP17.74■□□□□ 0.43
CSDC2-201ENST00000306149 ZNF75DP51815 510 aa17.74■□□□□ 0.43
CSDC2-201ENST00000306149 HSPA2P54652 639 aa17.74■□□□□ 0.43
CSDC2-201ENST00000306149 AGXT2Q9BYV1 514 aa17.74■□□□□ 0.43
CSDC2-201ENST00000306149 GJB4Q9NTQ9 266 aa17.74■□□□□ 0.43
CSDC2-201ENST00000306149 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
CSDC2-201ENST00000306149 ME1P48163 572 aa17.74■□□□□ 0.43
CSDC2-201ENST00000306149 STRCP1A6NGW2 1772 aa17.73■□□□□ 0.43
CSDC2-201ENST00000306149 ZAP70P43403 619 aa17.73■□□□□ 0.43
CSDC2-201ENST00000306149 CCDC158Q5M9N0 1113 aa17.73■□□□□ 0.43
CSDC2-201ENST00000306149 ZNF710Q8N1W2 664 aa17.73■□□□□ 0.43
CSDC2-201ENST00000306149 TDRD7Q8NHU6 1098 aaKnown RBP17.73■□□□□ 0.43
CSDC2-201ENST00000306149 PUS7LQ9H0K6 701 aaKnown RBP17.73■□□□□ 0.43
CSDC2-201ENST00000306149 KIF3AQ9Y496 699 aa17.73■□□□□ 0.43
CSDC2-201ENST00000306149 TAF7LQ5H9L4 462 aa17.73■□□□□ 0.43
CSDC2-201ENST00000306149 CCDC94Q9BW85 323 aaPredicted RBP17.73■□□□□ 0.43
CSDC2-201ENST00000306149 CPDO75976 1380 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 FGAP02671 866 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 PLA2G4DQ86XP0 818 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 CIAO1O76071 339 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 POLR3DP05423 398 aaPredicted RBP17.72■□□□□ 0.43
CSDC2-201ENST00000306149 IL2RBP14784 551 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 GPTP24298 496 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 TCIRG1Q13488 830 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 SNW1Q13573 536 aaKnown RBP17.72■□□□□ 0.43
CSDC2-201ENST00000306149 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
CSDC2-201ENST00000306149 TJP1Q07157 1748 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.71■□□□□ 0.43
CSDC2-201ENST00000306149 ISCA1Q9BUE6 129 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 CARMIL3Q8ND23 1372 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
CSDC2-201ENST00000306149 CCDC144BQ3MJ40 725 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 CCDC73Q6ZRK6 1079 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 DNAJC10Q8IXB1 793 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 CCDC144CPQ8IYA2 1237 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 FSIP1Q8NA03 581 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 ZNF274Q96GC6 653 aaPredicted RBP17.71■□□□□ 0.43
CSDC2-201ENST00000306149 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
CSDC2-201ENST00000306149 CLIP2Q9UDT6 1046 aa17.7■□□□□ 0.42
CSDC2-201ENST00000306149 KCPQ6ZWJ8 1503 aa17.7■□□□□ 0.42
CSDC2-201ENST00000306149 IQCB1Q15051 598 aa17.7■□□□□ 0.42
CSDC2-201ENST00000306149 KLF18A0A0U1RQI7 1052 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 A0A1B0GVL5 298 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 PRC1O43663 620 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 CAVIN2O95810 425 aa17.69■□□□□ 0.42
CSDC2-201ENST00000306149 ARID5BQ14865 1188 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms