RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 A0A1B0GVL5 298 aa12.66□□□□□ -0.38
ZNF558-201ENST00000301475 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
ZNF558-201ENST00000301475 NCAPHQ15003 741 aa12.66□□□□□ -0.38
ZNF558-201ENST00000301475 MNS1Q8NEH6 495 aa12.66□□□□□ -0.38
ZNF558-201ENST00000301475 FMNL2Q96PY5 1086 aa12.66□□□□□ -0.38
ZNF558-201ENST00000301475 CHMP4AQ9BY43 222 aa12.66□□□□□ -0.38
ZNF558-201ENST00000301475 LCMT1Q9UIC8 334 aa12.66□□□□□ -0.38
ZNF558-201ENST00000301475 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
ZNF558-201ENST00000301475 PTPDC1A2A3K4 754 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 URI1O94763 535 aaPredicted RBP12.65□□□□□ -0.38
ZNF558-201ENST00000301475 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 MRPS27Q92552 414 aaKnown RBP12.65□□□□□ -0.38
ZNF558-201ENST00000301475 CCDC34Q96HJ3 373 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 KAZALD1Q96I82 304 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 SDF4Q9BRK5 362 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 SIL1Q9H173 461 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 C9orf78Q9NZ63 289 aaPredicted RBP12.65□□□□□ -0.38
ZNF558-201ENST00000301475 PCDHA7Q9UN72 937 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 BIN1O00499 593 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 CYP21A2P08686 494 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 NDUFA8P51970 172 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 CC2D1AQ6P1N0 951 aaPredicted RBP12.65□□□□□ -0.38
ZNF558-201ENST00000301475 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.38
ZNF558-201ENST00000301475 EFCAB8A8MWE9 144 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 PFKFB2O60825 505 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 ATP1A3P13637 1013 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 EVCP57679 992 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 KRT32Q14532 448 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
ZNF558-201ENST00000301475 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 TRIM66O15016 1216 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 GYS2P54840 703 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 USHBP1Q8N6Y0 703 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 HSD3B7Q9H2F3 369 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 TBX22Q9Y458 520 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 TUBB4AP04350 444 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
ZNF558-201ENST00000301475 ZSCAN26Q16670 478 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 REXO1L1PQ8IX06 675 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 KLHDC4Q8TBB5 520 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 BPIFA3Q9BQP9 254 aa12.64□□□□□ -0.39
ZNF558-201ENST00000301475 NCOA5Q9HCD5 579 aaKnown RBP12.64□□□□□ -0.39
ZNF558-201ENST00000301475 ZNF609O15014 1411 aa12.63□□□□□ -0.39
ZNF558-201ENST00000301475 LMOD1P29536 600 aaPredicted RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 PROSER3Q2NL68 480 aa12.63□□□□□ -0.39
ZNF558-201ENST00000301475 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 LLPHQ9BRT6 129 aaKnown RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 BICC1Q9H694 974 aaKnown RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 SALL1Q9NSC2 1324 aa12.63□□□□□ -0.39
ZNF558-201ENST00000301475 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
ZNF558-201ENST00000301475 PTPN21Q16825 1174 aa12.63□□□□□ -0.39
ZNF558-201ENST00000301475 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 ZNF396Q96N95 335 aaPredicted RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 SRRTQ9BXP5 876 aaKnown RBP12.63□□□□□ -0.39
ZNF558-201ENST00000301475 NCAPD2Q15021 1401 aa12.63□□□□□ -0.39
ZNF558-201ENST00000301475 HOXC9P31274 260 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 CCDC191Q8NCU4 936 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 DPF2Q92785 391 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 VWA3AA6NCI4 1184 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 MYO1CO00159 1063 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 ATP8B1O43520 1251 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 FANCCQ00597 558 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
ZNF558-201ENST00000301475 CERS3Q8IU89 383 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 ATG3Q9NT62 314 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 RSPH14Q9UHP6 348 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 NRDCO43847 1150 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 HOXB7P09629 217 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 ADALQ6DHV7 355 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 FAM177A1Q8N128 213 aaPredicted RBP12.62□□□□□ -0.39
ZNF558-201ENST00000301475 UTP14AQ9BVJ6 771 aaKnown RBP12.62□□□□□ -0.39
ZNF558-201ENST00000301475 RASSF4Q9H2L5 321 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 TMX1Q9H3N1 280 aa12.62□□□□□ -0.39
ZNF558-201ENST00000301475 PSME1Q06323 249 aa12.61□□□□□ -0.39
ZNF558-201ENST00000301475 ATL3Q6DD88 541 aa12.61□□□□□ -0.39
ZNF558-201ENST00000301475 C10orf67Q8IYJ2 551 aa12.61□□□□□ -0.39
ZNF558-201ENST00000301475 WDR24Q96S15 920 aa12.61□□□□□ -0.39
ZNF558-201ENST00000301475 H3BQF6 201 aa12.61□□□□□ -0.39
ZNF558-201ENST00000301475 FUT8Q9BYC5 575 aa12.61□□□□□ -0.39
ZNF558-201ENST00000301475 A0A1W2PQ27 194 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 A0A1W2PQ64 194 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 A0A1W2PQD8 194 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 NLRP12P59046 1061 aa12.6□□□□□ -0.39
ZNF558-201ENST00000301475 ZRSR1Q15695 479 aaKnown RBP12.6□□□□□ -0.39
ZNF558-201ENST00000301475 ISM2Q6H9L7 571 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms