RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 CCDC144CPQ8IYA2 1237 aa19.17■□□□□ 0.66
OTUB1-201ENST00000301453 SALL1Q9NSC2 1324 aa19.17■□□□□ 0.66
OTUB1-201ENST00000301453 A0A087WWV3 80 aa19.17■□□□□ 0.66
OTUB1-201ENST00000301453 HMGB1P09429 215 aaKnown RBP19.17■□□□□ 0.66
OTUB1-201ENST00000301453 PRDM4Q9UKN5 801 aa19.17■□□□□ 0.66
OTUB1-201ENST00000301453 MAST3O60307 1309 aa19.16■□□□□ 0.66
OTUB1-201ENST00000301453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.16■□□□□ 0.66
OTUB1-201ENST00000301453 TTLL5Q6EMB2 1281 aa19.16■□□□□ 0.66
OTUB1-201ENST00000301453 CCAR1Q8IX12 1150 aaKnown RBP19.16■□□□□ 0.66
OTUB1-201ENST00000301453 CCDC94Q9BW85 323 aaPredicted RBP19.16■□□□□ 0.66
OTUB1-201ENST00000301453 CACTINQ8WUQ7 758 aaKnown RBP19.16■□□□□ 0.66
OTUB1-201ENST00000301453 MYH15Q9Y2K3 1946 aa19.16■□□□□ 0.66
OTUB1-201ENST00000301453 PDIA3P30101 505 aaKnown RBP19.15■□□□□ 0.66
OTUB1-201ENST00000301453 GUCY1B3Q02153 619 aa19.15■□□□□ 0.66
OTUB1-201ENST00000301453 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.15■□□□□ 0.66
OTUB1-201ENST00000301453 PUS3Q9BZE2 481 aaKnown RBP19.15■□□□□ 0.66
OTUB1-201ENST00000301453 ENGASEQ8NFI3 743 aa19.15■□□□□ 0.66
OTUB1-201ENST00000301453 GPR108Q9NPR9 543 aa19.15■□□□□ 0.66
OTUB1-201ENST00000301453 GPHNQ9NQX3 736 aaPredicted RBP19.15■□□□□ 0.66
OTUB1-201ENST00000301453 M0R2C6 588 aa19.14■□□□□ 0.66
OTUB1-201ENST00000301453 A1BGP04217 495 aa19.14■□□□□ 0.66
OTUB1-201ENST00000301453 CLIP2Q9UDT6 1046 aa19.14■□□□□ 0.66
OTUB1-201ENST00000301453 ABCC6O95255 1503 aa19.14■□□□□ 0.65
OTUB1-201ENST00000301453 ADAMTSL3P82987 1691 aa19.14■□□□□ 0.65
OTUB1-201ENST00000301453 FDPSP14324 419 aaKnown RBP19.14■□□□□ 0.65
OTUB1-201ENST00000301453 IL15P40933 162 aaPredicted RBP19.14■□□□□ 0.65
OTUB1-201ENST00000301453 CWC25Q9NXE8 425 aaPredicted RBP19.14■□□□□ 0.65
OTUB1-201ENST00000301453 PKD1L3Q7Z443 1732 aa19.14■□□□□ 0.65
OTUB1-201ENST00000301453 TMEM94Q12767 1356 aa19.14■□□□□ 0.65
OTUB1-201ENST00000301453 RNF113AO15541 343 aaKnown RBP19.13■□□□□ 0.65
OTUB1-201ENST00000301453 TJP1Q07157 1748 aa19.13■□□□□ 0.65
OTUB1-201ENST00000301453 A0A1B0GUL7 405 aa19.13■□□□□ 0.65
OTUB1-201ENST00000301453 EYA2O00167 538 aa19.13■□□□□ 0.65
OTUB1-201ENST00000301453 FOXP2O15409 715 aa19.13■□□□□ 0.65
OTUB1-201ENST00000301453 ARID5BQ14865 1188 aa19.13■□□□□ 0.65
OTUB1-201ENST00000301453 ERCC4Q92889 916 aaPredicted RBP19.13■□□□□ 0.65
OTUB1-201ENST00000301453 OSBP2Q969R2 916 aa19.13■□□□□ 0.65
OTUB1-201ENST00000301453 NAP1L2Q9ULW6 460 aaPredicted RBP19.13■□□□□ 0.65
OTUB1-201ENST00000301453 LAMB4A4D0S4 1761 aa19.13■□□□□ 0.65
OTUB1-201ENST00000301453 CTIFO43310 598 aaKnown RBP19.12■□□□□ 0.65
OTUB1-201ENST00000301453 IFIT1P09914 478 aaKnown RBP19.12■□□□□ 0.65
OTUB1-201ENST00000301453 C16orf45Q96MC5 204 aaPredicted RBP19.12■□□□□ 0.65
OTUB1-201ENST00000301453 ZBTB3Q9H5J0 574 aa19.12■□□□□ 0.65
OTUB1-201ENST00000301453 CHAF1AQ13111 956 aaPredicted RBP19.11■□□□□ 0.65
OTUB1-201ENST00000301453 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
OTUB1-201ENST00000301453 CAVIN2O95810 425 aa19.11■□□□□ 0.65
OTUB1-201ENST00000301453 CDC25BP30305 580 aa19.11■□□□□ 0.65
OTUB1-201ENST00000301453 SARM1Q6SZW1 724 aa19.11■□□□□ 0.65
OTUB1-201ENST00000301453 DHX40Q8IX18 779 aaKnown RBP19.11■□□□□ 0.65
OTUB1-201ENST00000301453 NUP188Q5SRE5 1749 aa19.1■□□□□ 0.65
OTUB1-201ENST00000301453 CARMIL3Q8ND23 1372 aa19.1■□□□□ 0.65
OTUB1-201ENST00000301453 OTUD7BQ6GQQ9 843 aa19.1■□□□□ 0.65
OTUB1-201ENST00000301453 STX1AQ16623 288 aa19.1■□□□□ 0.65
OTUB1-201ENST00000301453 ANKRD7Q92527 254 aa19.1■□□□□ 0.65
OTUB1-201ENST00000301453 CTAGE5O15320 804 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 FAM160A1Q05DH4 1040 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 ATP2B3Q16720 1220 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 FSIP1Q8NA03 581 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 ZNF396Q96N95 335 aaPredicted RBP19.09■□□□□ 0.65
OTUB1-201ENST00000301453 PCDHA7Q9UN72 937 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 GOLGA6L19H0YKK7 550 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 ADORA1P30542 326 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 ME1P48163 572 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 CCDC73Q6ZRK6 1079 aa19.09■□□□□ 0.65
OTUB1-201ENST00000301453 EVCP57679 992 aa19.08■□□□□ 0.65
OTUB1-201ENST00000301453 HAND2P61296 217 aa19.08■□□□□ 0.65
OTUB1-201ENST00000301453 FKBP4Q02790 459 aaKnown RBP eCLIP19.08■□□□□ 0.65
OTUB1-201ENST00000301453 PPP4R3BQ5MIZ7 849 aa19.08■□□□□ 0.65
OTUB1-201ENST00000301453 LRRC8AQ8IWT6 810 aa19.08■□□□□ 0.65
OTUB1-201ENST00000301453 CCDC191Q8NCU4 936 aa19.08■□□□□ 0.65
OTUB1-201ENST00000301453 NWD2Q9ULI1 1742 aa19.08■□□□□ 0.64
OTUB1-201ENST00000301453 CIAO1O76071 339 aa19.08■□□□□ 0.64
OTUB1-201ENST00000301453 ATL3Q6DD88 541 aa19.08■□□□□ 0.64
OTUB1-201ENST00000301453 MRFAP1L1Q96HT8 127 aa19.08■□□□□ 0.64
OTUB1-201ENST00000301453 KINO60870 393 aaKnown RBP19.07■□□□□ 0.64
OTUB1-201ENST00000301453 TNNT1P13805 278 aa19.07■□□□□ 0.64
OTUB1-201ENST00000301453 ATF3P18847 181 aa19.07■□□□□ 0.64
OTUB1-201ENST00000301453 SCARF1Q14162 830 aa19.07■□□□□ 0.64
OTUB1-201ENST00000301453 TICAM2Q86XR7 235 aa19.07■□□□□ 0.64
OTUB1-201ENST00000301453 FMR1NBQ8N0W7 255 aaPredicted RBP19.07■□□□□ 0.64
OTUB1-201ENST00000301453 PLEKHG2Q9H7P9 1386 aa19.07■□□□□ 0.64
OTUB1-201ENST00000301453 FBXL16Q8N461 479 aa19.07■□□□□ 0.64
OTUB1-201ENST00000301453 PRDM10Q9NQV6 1147 aa19.07■□□□□ 0.64
OTUB1-201ENST00000301453 GJB4Q9NTQ9 266 aa19.07■□□□□ 0.64
OTUB1-201ENST00000301453 USP27XA6NNY8 438 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 HSP90AB3PQ58FF7 597 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 A0A1B0GVL5 298 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 RAB11FIP4Q86YS3 637 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 FBXW7Q969H0 707 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 ATG3Q9NT62 314 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 RTEL1Q9NZ71 1219 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 HPS5Q9UPZ3 1129 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 CLIC4Q9Y696 253 aa19.06■□□□□ 0.64
OTUB1-201ENST00000301453 KCPQ6ZWJ8 1503 aa19.05■□□□□ 0.64
OTUB1-201ENST00000301453 FGAP02671 866 aa19.05■□□□□ 0.64
OTUB1-201ENST00000301453 PDCL2Q8N4E4 241 aa19.05■□□□□ 0.64
OTUB1-201ENST00000301453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.05■□□□□ 0.64
OTUB1-201ENST00000301453 PARP4Q9UKK3 1724 aaKnown RBP19.05■□□□□ 0.64
OTUB1-201ENST00000301453 TNS3Q68CZ2 1445 aa19.05■□□□□ 0.64
OTUB1-201ENST00000301453 NEDD4P46934 1319 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms