RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 MCMDC2Q4G0Z9 681 aa27.51■■■□□ 2
PTX3-201ENST00000295927 MAP4K1Q92918 833 aa27.51■■■□□ 2
PTX3-201ENST00000295927 SEC62Q99442 399 aaKnown RBP27.51■■■□□ 2
PTX3-201ENST00000295927 RNF113AO15541 343 aaKnown RBP27.51■■□□□ 1.99
PTX3-201ENST00000295927 SLFNL1Q499Z3 407 aa27.5■■□□□ 1.99
PTX3-201ENST00000295927 ZMYM1Q5SVZ6 1142 aa27.5■■□□□ 1.99
PTX3-201ENST00000295927 NLGN1Q8N2Q7 840 aa27.5■■□□□ 1.99
PTX3-201ENST00000295927 PNPLA7Q6ZV29 1317 aa27.5■■□□□ 1.99
PTX3-201ENST00000295927 EN1Q05925 392 aaPredicted RBP27.49■■□□□ 1.99
PTX3-201ENST00000295927 UBE4AQ14139 1066 aa27.49■■□□□ 1.99
PTX3-201ENST00000295927 EZH2Q15910 746 aaKnown RBP27.49■■□□□ 1.99
PTX3-201ENST00000295927 CAMKK2Q96RR4 588 aa27.49■■□□□ 1.99
PTX3-201ENST00000295927 HELLSQ9NRZ9 838 aa27.49■■□□□ 1.99
PTX3-201ENST00000295927 SNX14Q9Y5W7 946 aa27.49■■□□□ 1.99
PTX3-201ENST00000295927 MYO5AQ9Y4I1 1855 aaKnown RBP27.49■■□□□ 1.99
PTX3-201ENST00000295927 CYP2E1P05181 493 aaPredicted RBP27.49■■□□□ 1.99
PTX3-201ENST00000295927 LRRFIP1Q32MZ4 808 aaKnown RBP27.49■■□□□ 1.99
PTX3-201ENST00000295927 CCDC129Q6ZRS4 1044 aa27.49■■□□□ 1.99
PTX3-201ENST00000295927 RBM8AQ9Y5S9 174 aaKnown RBP27.49■■□□□ 1.99
PTX3-201ENST00000295927 K7ELQ4 463 aaPredicted RBP27.48■■□□□ 1.99
PTX3-201ENST00000295927 ST18O60284 1047 aa27.48■■□□□ 1.99
PTX3-201ENST00000295927 BCAMP50895 628 aa27.48■■□□□ 1.99
PTX3-201ENST00000295927 NECTIN1Q15223 517 aa27.48■■□□□ 1.99
PTX3-201ENST00000295927 RASEFQ8IZ41 740 aa27.48■■□□□ 1.99
PTX3-201ENST00000295927 HMG20BQ9P0W2 317 aa27.48■■□□□ 1.99
PTX3-201ENST00000295927 GRAPQ13588 217 aa27.47■■□□□ 1.99
PTX3-201ENST00000295927 SPRYD3Q8NCJ5 442 aa27.47■■□□□ 1.99
PTX3-201ENST00000295927 GRAPLQ8TC17 118 aaPredicted RBP27.47■■□□□ 1.99
PTX3-201ENST00000295927 WTIPA6NIX2 430 aaPredicted RBP27.47■■□□□ 1.99
PTX3-201ENST00000295927 NEK4P51957 841 aa27.47■■□□□ 1.99
PTX3-201ENST00000295927 TTF1Q15361 905 aaPredicted RBP27.47■■□□□ 1.99
PTX3-201ENST00000295927 CRY2Q49AN0 593 aa27.47■■□□□ 1.99
PTX3-201ENST00000295927 PRPF40BQ6NWY9 871 aaKnown RBP27.47■■□□□ 1.99
PTX3-201ENST00000295927 KCNJ4P48050 445 aa27.46■■□□□ 1.99
PTX3-201ENST00000295927 RASGRF1Q13972 1273 aa27.46■■□□□ 1.99
PTX3-201ENST00000295927 SPATA5Q8NB90 893 aa27.46■■□□□ 1.99
PTX3-201ENST00000295927 KCNB2Q92953 911 aa27.46■■□□□ 1.99
PTX3-201ENST00000295927 ANKRD2Q9GZV1 360 aa27.46■■□□□ 1.99
PTX3-201ENST00000295927 ZFYP08048 801 aaPredicted RBP27.45■■□□□ 1.99
PTX3-201ENST00000295927 RPGRQ92834 1020 aaKnown RBP27.45■■□□□ 1.99
PTX3-201ENST00000295927 SLKQ9H2G2 1235 aaPredicted RBP27.45■■□□□ 1.99
PTX3-201ENST00000295927 NRXN2Q9P2S2 1712 aa27.45■■□□□ 1.98
PTX3-201ENST00000295927 PIH1D3Q9NQM4 214 aaKnown RBP27.45■■□□□ 1.98
PTX3-201ENST00000295927 MAST3O60307 1309 aa27.44■■□□□ 1.98
PTX3-201ENST00000295927 CREB3L3Q68CJ9 461 aa27.43■■□□□ 1.98
PTX3-201ENST00000295927 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.43■■□□□ 1.98
PTX3-201ENST00000295927 ANO8Q9HCE9 1232 aaPredicted RBP27.43■■□□□ 1.98
PTX3-201ENST00000295927 ANKRD31Q8N7Z5 1873 aa27.43■■□□□ 1.98
PTX3-201ENST00000295927 DOCK2Q92608 1830 aa27.43■■□□□ 1.98
PTX3-201ENST00000295927 ZNF804BA4D1E1 1349 aa27.42■■□□□ 1.98
PTX3-201ENST00000295927 GYG1P46976 350 aa27.42■■□□□ 1.98
PTX3-201ENST00000295927 OSBP2Q969R2 916 aa27.42■■□□□ 1.98
PTX3-201ENST00000295927 UPF3BQ9BZI7 483 aaKnown RBP27.42■■□□□ 1.98
PTX3-201ENST00000295927 M0R2C6 588 aa27.41■■□□□ 1.98
PTX3-201ENST00000295927 SLC15A2Q16348 729 aa27.41■■□□□ 1.98
PTX3-201ENST00000295927 ZSCAN25Q6NSZ9 544 aa27.41■■□□□ 1.98
PTX3-201ENST00000295927 SLC27A2O14975 620 aa27.41■■□□□ 1.98
PTX3-201ENST00000295927 WASHC4Q2M389 1173 aa27.41■■□□□ 1.98
PTX3-201ENST00000295927 RBM17Q96I25 401 aaKnown RBP27.41■■□□□ 1.98
PTX3-201ENST00000295927 KLRG2A4D1S0 409 aaPredicted RBP27.4■■□□□ 1.98
PTX3-201ENST00000295927 IDH1O75874 414 aaKnown RBP27.4■■□□□ 1.98
PTX3-201ENST00000295927 ZKSCAN1P17029 563 aaPredicted RBP27.4■■□□□ 1.98
PTX3-201ENST00000295927 CAVIN4Q5BKX8 364 aa27.4■■□□□ 1.98
PTX3-201ENST00000295927 APPBP2Q92624 585 aa27.4■■□□□ 1.98
PTX3-201ENST00000295927 MMP10P09238 476 aa27.39■■□□□ 1.98
PTX3-201ENST00000295927 ADD2P35612 726 aa27.39■■□□□ 1.98
PTX3-201ENST00000295927 FAM84BQ96KN1 310 aaPredicted RBP27.39■■□□□ 1.98
PTX3-201ENST00000295927 QSER1Q2KHR3 1735 aa27.39■■□□□ 1.98
PTX3-201ENST00000295927 SLC9C2Q5TAH2 1124 aa27.39■■□□□ 1.97
PTX3-201ENST00000295927 RNF20Q5VTR2 975 aa27.39■■□□□ 1.97
PTX3-201ENST00000295927 GNL3LQ9NVN8 582 aaKnown RBP27.39■■□□□ 1.97
PTX3-201ENST00000295927 STK32BQ9NY57 414 aa27.39■■□□□ 1.97
PTX3-201ENST00000295927 U3KPZ7 1027 aaPredicted RBP27.39■■□□□ 1.97
PTX3-201ENST00000295927 HOXA10P31260 410 aaPredicted RBP27.38■■□□□ 1.97
PTX3-201ENST00000295927 SF3B2Q13435 895 aaKnown RBP27.38■■□□□ 1.97
PTX3-201ENST00000295927 VPS53Q5VIR6 699 aa27.38■■□□□ 1.97
PTX3-201ENST00000295927 MSL1Q68DK7 614 aa27.38■■□□□ 1.97
PTX3-201ENST00000295927 IL27Q8NEV9 243 aa27.38■■□□□ 1.97
PTX3-201ENST00000295927 KLRK1P26718 216 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 ADCK5Q3MIX3 580 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 SLC51AQ86UW1 340 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 DSCC1Q9BVC3 393 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 BRIP1Q9BX63 1249 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 IQSEC3Q9UPP2 1182 aaPredicted RBP27.37■■□□□ 1.97
PTX3-201ENST00000295927 PARP3Q9Y6F1 533 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 MCM2P49736 904 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 FBXO33Q7Z6M2 555 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 VPS37DQ86XT2 251 aa27.37■■□□□ 1.97
PTX3-201ENST00000295927 PUS7LQ9H0K6 701 aaKnown RBP27.37■■□□□ 1.97
PTX3-201ENST00000295927 BAG6P46379 1132 aa27.36■■□□□ 1.97
PTX3-201ENST00000295927 JAKMIP1Q96N16 626 aaKnown RBP27.36■■□□□ 1.97
PTX3-201ENST00000295927 TM6SF1Q9BZW5 370 aa27.36■■□□□ 1.97
PTX3-201ENST00000295927 WWC3Q9ULE0 1092 aa27.36■■□□□ 1.97
PTX3-201ENST00000295927 HSP90AA1P07900 732 aaKnown RBP27.35■■□□□ 1.97
PTX3-201ENST00000295927 HSPD1P10809 573 aaKnown RBP27.35■■□□□ 1.97
PTX3-201ENST00000295927 PDE6AP16499 860 aa27.35■■□□□ 1.97
PTX3-201ENST00000295927 UBE3CQ15386 1083 aa27.35■■□□□ 1.97
PTX3-201ENST00000295927 CRAMP1Q96RY5 1269 aa27.35■■□□□ 1.97
PTX3-201ENST00000295927 ANKIB1Q9P2G1 1089 aa27.35■■□□□ 1.97
PTX3-201ENST00000295927 MYH13Q9UKX3 1938 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms