RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 KIF5BP33176 963 aa17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 EVCP57679 992 aa17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 SMIM23A6NLE4 172 aa17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 ZEB2O60315 1214 aa17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 PPP2R3AQ06190 1150 aa17.46■□□□□ 0.39
SHROOM4-201ENST00000289292 SLC9C2Q5TAH2 1124 aa17.46■□□□□ 0.38
SHROOM4-201ENST00000289292 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 CCT6AP40227 531 aaKnown RBP17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 LRRC59Q96AG4 307 aaKnown RBP17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 CHAMP1Q96JM3 812 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 ZPR1O75312 459 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 IFT81Q8WYA0 676 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 TMEM110-MUSTN1A8MSY1 372 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 CYP7A1P22680 504 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 RABEP2Q9H5N1 569 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 CEP57Q86XR8 500 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 MYRIPQ8NFW9 859 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 SERPINA10Q9UK55 444 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 TTC41PQ6P2S7 1318 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 CHMP4BP1P59074 171 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 KSR2Q6VAB6 950 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 TMEM63CQ9P1W3 806 aa17.45■□□□□ 0.38
SHROOM4-201ENST00000289292 NEBLO76041 1014 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 A0A1W2PP64 1363 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 NCKAP5LQ9HCH0 1330 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 MCM7P33993 719 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 HSPA4P34932 840 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 GIGYF2Q6Y7W6 1299 aaKnown RBP17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 PDE4BQ07343 736 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 TNIP1Q15025 636 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 SELENOSQ9BQE4 189 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 KRT23Q9C075 422 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 CTNNA2P26232 953 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 ZNF445P59923 1031 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 ASIC1P78348 528 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 SYCP3Q8IZU3 236 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 CUL5Q93034 780 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 NCOA5Q9HCD5 579 aaKnown RBP17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 NUP160Q12769 1436 aa17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 BAG1Q99933 345 aaPredicted RBP17.44■□□□□ 0.38
SHROOM4-201ENST00000289292 COL17A1Q9UMD9 1497 aaPredicted RBP17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 PIP4K2BP78356 416 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 NBPF11Q86T75 865 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 CTNND2Q9UQB3 1225 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 SLC27A2O14975 620 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 FEZ1Q99689 392 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 RPS6KB1P23443 525 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 ZNF75DP51815 510 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 SPECC1LQ69YQ0 1117 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 RGS22Q8NE09 1264 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 RASSF4Q9H2L5 321 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 LONRF3Q496Y0 759 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 MIGA1Q8NAN2 632 aa17.43■□□□□ 0.38
SHROOM4-201ENST00000289292 ATP2B3Q16720 1220 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 NPHP3Q7Z494 1330 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 PKP1Q13835 747 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 KRT28Q7Z3Y7 464 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 FAM227BQ96M60 508 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 SCLT1Q96NL6 688 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 CDC37L1Q7L3B6 337 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 TACC1O75410 805 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 KIF20AO95235 890 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 PYM1Q9BRP8 204 aaKnown RBP17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 NDUFB9Q9Y6M9 179 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 KRT13P13646 458 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 KIAA0753Q2KHM9 967 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 MSL1Q68DK7 614 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 OTUD7BQ6GQQ9 843 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 GPIHBP1Q8IV16 184 aa17.42■□□□□ 0.38
SHROOM4-201ENST00000289292 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 OPA1O60313 960 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 KLHDC4Q8TBB5 520 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 ERO1AQ96HE7 468 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 CARD6Q9BX69 1037 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 DHX32Q7L7V1 743 aaKnown RBP17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 ABCC1P33527 1531 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 HOOK3Q86VS8 718 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 A0A1W2PRG0 241 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
SHROOM4-201ENST00000289292 CLSTN2Q9H4D0 955 aa17.4■□□□□ 0.38
SHROOM4-201ENST00000289292 KRT2P35908 639 aa17.4■□□□□ 0.38
SHROOM4-201ENST00000289292 RNF123Q5XPI4 1314 aa17.4■□□□□ 0.38
SHROOM4-201ENST00000289292 ALDH1L1O75891 902 aa17.4■□□□□ 0.38
SHROOM4-201ENST00000289292 DESP17661 470 aa17.4■□□□□ 0.38
SHROOM4-201ENST00000289292 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
SHROOM4-201ENST00000289292 HELBQ8NG08 1087 aaPredicted RBP17.4■□□□□ 0.38
SHROOM4-201ENST00000289292 SPAG5Q96R06 1193 aa17.39■□□□□ 0.38
SHROOM4-201ENST00000289292 KIF5AQ12840 1032 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms