RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ARHGAP25P42331 645 aa19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 EVCP57679 992 aa19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 ORC3Q9UBD5 711 aaPredicted RBP19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 ZNF75DP51815 510 aa19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 TMEM132AQ24JP5 1023 aa19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 SPATA24Q86W54 205 aa19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 N4BP3O15049 544 aa19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 U2AF2P26368 475 aaKnown RBP eCLIP19.95■□□□□ 0.78
PCDHA13-201ENST00000289272 BCL2L12Q9HB09 334 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 ANKIB1Q9P2G1 1089 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 SBNO2Q9Y2G9 1366 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 TRIM14Q14142 442 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 CPLX3Q8WVH0 158 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 PLXNC1O60486 1568 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 SPATS2Q86XZ4 545 aaKnown RBP19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 CNGA4Q8IV77 575 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 CLSTN2Q9H4D0 955 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 GOLGA8AA7E2F4 631 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 TSGA10Q9BZW7 698 aa19.94■□□□□ 0.78
PCDHA13-201ENST00000289272 SPTY2D1Q68D10 685 aaPredicted RBP19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 BIN1O00499 593 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 POLR3DP05423 398 aaPredicted RBP19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 PPP2R3AQ06190 1150 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 SELENOOQ9BVL4 669 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 UQCRFS1P1P0C7P4 283 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 IQCA1Q86XH1 822 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 XAGE3Q8WTP9 111 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 USP16Q9Y5T5 823 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 ANKRD62A6NC57 917 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 PRPHP41219 470 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 MTIF2P46199 727 aaKnown RBP19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 NECAB1Q8N987 351 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 LINS1Q8NG48 757 aa19.93■□□□□ 0.78
PCDHA13-201ENST00000289272 NCOA7Q8NI08 942 aa19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 BCCIPQ9P287 314 aaKnown RBP eCLIP19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 MAP3K19Q56UN5 1328 aa19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 CHMLP26374 656 aa19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 SEC63Q9UGP8 760 aaKnown RBP19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 DESP17661 470 aa19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 KRI1Q8N9T8 703 aaKnown RBP19.92■□□□□ 0.78
PCDHA13-201ENST00000289272 MKNK2Q9HBH9 465 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 TTF2Q9UNY4 1162 aaKnown RBP19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 SSR1P43307 286 aaKnown RBP19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 COPS6Q7L5N1 327 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 CCDC113Q9H0I3 377 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 SSH2Q76I76 1423 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 ABCA8O94911 1581 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 MINDY4BA8MYZ0 360 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 ZFYP08048 801 aaPredicted RBP19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 FAM160A1Q05DH4 1040 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 BRD3Q15059 726 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 ZGPATQ8N5A5 531 aaKnown RBP19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 NEO1Q92859 1461 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 NCKAP5LQ9HCH0 1330 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 TMEM266Q2M3C6 531 aa19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 TDRD12Q587J7 1177 aaKnown RBP19.91■□□□□ 0.78
PCDHA13-201ENST00000289272 VAV2P52735 878 aa19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 BRF1Q92994 677 aa19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 RASAL2Q9UJF2 1139 aa19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 CCDC172P0C7W6 258 aa19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 DDX46Q7L014 1031 aaKnown RBP19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 CRACR2BQ8N4Y2 399 aaPredicted RBP19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 CHL1O00533 1208 aa19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 IFIT3O14879 490 aaKnown RBP19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 LDHAL6AQ6ZMR3 332 aa19.9■□□□□ 0.78
PCDHA13-201ENST00000289272 SNRKQ9NRH2 765 aa19.89■□□□□ 0.78
PCDHA13-201ENST00000289272 SPTLC2O15270 562 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 AK2P54819 239 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 MYL5Q02045 173 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 GPR161Q8N6U8 529 aaKnown RBP19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 ATRIPQ8WXE1 791 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 GTF3C6Q969F1 213 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 CCDC114Q96M63 670 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 TNIP1Q15025 636 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 LIG1P18858 919 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 CLGNO14967 610 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 KIF5BP33176 963 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 BAG1Q99933 345 aaPredicted RBP19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 LLPHQ9BRT6 129 aaKnown RBP19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 ZSWIM4Q9H7M6 989 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 GOPCQ9HD26 462 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 BABAM1Q9NWV8 329 aa19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 CPSF2Q9P2I0 782 aaKnown RBP19.89■□□□□ 0.77
PCDHA13-201ENST00000289272 CCDC152Q4G0S7 254 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 RUFY3Q7L099 469 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 CROCCP2Q86T23 111 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 LMBR1Q8WVP7 490 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 CFAP74Q9C0B2 1584 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 STAMBPO95630 424 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 ZNF76P36508 570 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 PLVAPQ9BX97 442 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 MYO5CQ9NQX4 1742 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 HOXC9P31274 260 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 MCMDC2Q4G0Z9 681 aa19.88■□□□□ 0.77
PCDHA13-201ENST00000289272 ZNF444Q8N0Y2 327 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms