RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 PYM1Q9BRP8 204 aaKnown RBP16.26■□□□□ 0.19
PTPRO-201ENST00000281171 SLC24A3Q9HC58 644 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 RAD51AP2Q09MP3 1159 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 VPS36Q86VN1 386 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 CTAGE1Q96RT6 745 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 MED4Q9NPJ6 270 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.26■□□□□ 0.19
PTPRO-201ENST00000281171 GOLGA6BA6NDN3 693 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 METTL24Q5JXM2 366 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 FAM71BQ8TC56 605 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 SEC62Q99442 399 aaKnown RBP16.26■□□□□ 0.19
PTPRO-201ENST00000281171 SIL1Q9H173 461 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 FKBP4Q02790 459 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPRO-201ENST00000281171 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
PTPRO-201ENST00000281171 TCOF1Q13428 1488 aaKnown RBP16.26■□□□□ 0.19
PTPRO-201ENST00000281171 CEP104O60308 925 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 SLC5A1P13866 664 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 ZC3H6P61129 1189 aaKnown RBP16.26■□□□□ 0.19
PTPRO-201ENST00000281171 INTS8Q75QN2 995 aaKnown RBP16.26■□□□□ 0.19
PTPRO-201ENST00000281171 CXorf56Q9H5V9 222 aa16.26■□□□□ 0.19
PTPRO-201ENST00000281171 ADGRF5Q8IZF2 1346 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 F13A1P00488 732 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 PPFIA4O75335 1185 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 DESP17661 470 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 ZNF75DP51815 510 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 ARMC2Q8NEN0 867 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 DDX12PQ92771 950 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 A2MP01023 1474 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 ERCC6LQ2NKX8 1250 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 UHRF1BP1LA0JNW5 1464 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
PTPRO-201ENST00000281171 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
PTPRO-201ENST00000281171 A0A1W2PRG0 241 aa16.24■□□□□ 0.19
PTPRO-201ENST00000281171 CETN2P41208 172 aa16.24■□□□□ 0.19
PTPRO-201ENST00000281171 SMARCC2Q8TAQ2 1214 aa16.24■□□□□ 0.19
PTPRO-201ENST00000281171 SSH1Q8WYL5 1049 aa16.24■□□□□ 0.19
PTPRO-201ENST00000281171 UTP14AQ9BVJ6 771 aaKnown RBP16.24■□□□□ 0.19
PTPRO-201ENST00000281171 FAM160A1Q05DH4 1040 aa16.24■□□□□ 0.19
PTPRO-201ENST00000281171 IFIT5Q13325 482 aaKnown RBP16.24■□□□□ 0.19
PTPRO-201ENST00000281171 CCDC92Q53HC0 331 aaPredicted RBP16.24■□□□□ 0.19
PTPRO-201ENST00000281171 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
PTPRO-201ENST00000281171 KRT86O43790 486 aa16.24■□□□□ 0.19
PTPRO-201ENST00000281171 EFCAB8A8MWE9 144 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 ZPR1O75312 459 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
PTPRO-201ENST00000281171 KRT83P78385 493 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 PDE1CQ14123 709 aaPredicted RBP16.23■□□□□ 0.19
PTPRO-201ENST00000281171 CREB3O43889 395 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 HIP1RO75146 1068 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 ALDH3A1P30838 453 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 FBXO18Q8NFZ0 1043 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 BCAS4Q8TDM0 211 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 IMPACTQ9P2X3 320 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 TNIP1Q15025 636 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 GBP7Q8N8V2 638 aaPredicted RBP16.23■□□□□ 0.19
PTPRO-201ENST00000281171 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 RAB34Q9BZG1 259 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 LARSQ9P2J5 1176 aaKnown RBP16.23■□□□□ 0.19
PTPRO-201ENST00000281171 ASXL1Q8IXJ9 1541 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 PHLDB2Q86SQ0 1253 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 RAB3IL1Q8TBN0 382 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 RABEP2Q9H5N1 569 aa16.23■□□□□ 0.19
PTPRO-201ENST00000281171 LDHCP07864 332 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 LZTFL1Q9NQ48 299 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 MAP4K4O95819 1239 aaPredicted RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 GNGT1P63211 74 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 ZBTB16Q05516 673 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 HDAC1Q13547 482 aaPredicted RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 IFI16Q16666 785 aaKnown RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 TDRD12Q587J7 1177 aaKnown RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 PRPF40BQ6NWY9 871 aaKnown RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 SEPT11Q9NVA2 429 aaKnown RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 RPSAP08865 295 aaKnown RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 RASIP1Q5U651 963 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 CWC25Q9NXE8 425 aaPredicted RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 CASQ2O14958 399 aaPredicted RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 FGFR1OPO95684 399 aaKnown RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 TRIM21P19474 475 aaKnown RBP16.22■□□□□ 0.19
PTPRO-201ENST00000281171 ATP2B3Q16720 1220 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 TMEM132AQ24JP5 1023 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
PTPRO-201ENST00000281171 CIB2O75838 187 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 TSPYL2Q9H2G4 693 aaPredicted RBP16.21■□□□□ 0.19
PTPRO-201ENST00000281171 EHMT1Q9H9B1 1298 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 IFNKQ9P0W0 207 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 ANAPC15P60006 121 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 NME9Q86XW9 330 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 PAF1Q8N7H5 531 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 SEC24BO95487 1268 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 LMBRD1Q9NUN5 540 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 DDX41Q9UJV9 622 aaKnown RBP16.21■□□□□ 0.19
PTPRO-201ENST00000281171 ZBTB22O15209 634 aa16.21■□□□□ 0.19
PTPRO-201ENST00000281171 VIMP08670 466 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms