RNA–Protein interactions for RNA: ENST00000280377.9

USP15-201, Transcript of ubiquitin specific peptidase 15, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP15, Length 4,748 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-201ENST00000280377 LIMCH1Q9UPQ0 1083 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 AKAP11Q9UKA4 1901 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 FOXP2O15409 715 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 HSPD1P10809 573 aaKnown RBP6.77□□□□□ -1.33
USP15-201ENST00000280377 MCM2P49736 904 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 STK3Q13188 491 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 RAB11FIP4Q86YS3 637 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 ARHGEF1Q92888 912 aaKnown RBP6.77□□□□□ -1.33
USP15-201ENST00000280377 BCL11BQ9C0K0 894 aaPredicted RBP6.77□□□□□ -1.33
USP15-201ENST00000280377 TOMM22Q9NS69 142 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 BCAMP50895 628 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 HAND2P61296 217 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 GDPD2Q9HCC8 539 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 CWC22Q9HCG8 908 aaKnown RBP6.77□□□□□ -1.33
USP15-201ENST00000280377 FBXO3Q9UK99 471 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 MTMR7Q9Y216 660 aa6.77□□□□□ -1.33
USP15-201ENST00000280377 TULP1O00294 542 aaPredicted RBP6.76□□□□□ -1.33
USP15-201ENST00000280377 RNF113AO15541 343 aaKnown RBP6.76□□□□□ -1.33
USP15-201ENST00000280377 NUCB2P80303 420 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 SLC4A8Q2Y0W8 1093 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 PIH1D3Q9NQM4 214 aaKnown RBP6.76□□□□□ -1.33
USP15-201ENST00000280377 IDH1O75874 414 aaKnown RBP6.76□□□□□ -1.33
USP15-201ENST00000280377 PARP10Q53GL7 1025 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 BLOC1S2Q6QNY1 142 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 CELF1Q92879 486 aaKnown RBP6.76□□□□□ -1.33
USP15-201ENST00000280377 GBP4Q96PP9 640 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 BTAF1O14981 1849 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 FGFR2P21802 821 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 TOB2Q14106 344 aaPredicted RBP6.76□□□□□ -1.33
USP15-201ENST00000280377 FAM196AQ6ZSG2 479 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 TM6SF1Q9BZW5 370 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 DENND2AQ9ULE3 1009 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 RPAP1Q9BWH6 1393 aaPredicted RBP6.76□□□□□ -1.33
USP15-201ENST00000280377 RPS6KA4O75676 772 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 CHRNDQ07001 517 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 CCDC152Q4G0S7 254 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 SLC9C2Q5TAH2 1124 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 NKX2-3Q8TAU0 364 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 FBXW7Q969H0 707 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 HMG20BQ9P0W2 317 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 ABCC12Q96J65 1359 aa6.76□□□□□ -1.33
USP15-201ENST00000280377 PRPF40AO75400 957 aaKnown RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 BRD1O95696 1058 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 RNF20Q5VTR2 975 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 CLEC4GQ6UXB4 293 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 INTS4Q96HW7 963 aaKnown RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 ARID3AQ99856 593 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 GPHNQ9NQX3 736 aaPredicted RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 NSFL1CQ9UNZ2 370 aaKnown RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 TRIM37O94972 964 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 RPS6KB1P23443 525 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 RASGRF1Q13972 1273 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 LPIN2Q92539 896 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 NEK1Q96PY6 1258 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 NARFQ9UHQ1 456 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 JAG2Q9Y219 1238 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 ZNF652Q9Y2D9 606 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 RTCBQ9Y3I0 505 aaKnown RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 COL5A3P25940 1745 aaPredicted RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 FGAP02671 866 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 SYT1P21579 422 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 PUM3Q15397 648 aaKnown RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 HELLSQ9NRZ9 838 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 TRPC5Q9UL62 973 aaPredicted RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 DDX60Q8IY21 1712 aaKnown RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 DDX11L8A8MPP1 907 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 ONECUT3O60422 494 aaPredicted RBP6.75□□□□□ -1.33
USP15-201ENST00000280377 ZPR1O75312 459 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 GYG1P46976 350 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 SETDB2Q96T68 719 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 LMBRD1Q9NUN5 540 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 CNTNAP4Q9C0A0 1308 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 SPEF2Q9C093 1822 aa6.75□□□□□ -1.33
USP15-201ENST00000280377 GPAA1O43292 621 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 KLRK1P26718 216 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 GJB2P29033 226 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 IGHMBP2P38935 993 aaKnown RBP6.74□□□□□ -1.33
USP15-201ENST00000280377 Q6ZUG5 572 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 NBPF5PQ86XG9 351 aaPredicted RBP6.74□□□□□ -1.33
USP15-201ENST00000280377 INCENPQ9NQS7 918 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 TSGA10IPQ3SY00 556 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 FERMT3Q86UX7 667 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 RNF214Q8ND24 703 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP15-201ENST00000280377 BRF1Q92994 677 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 DDX49Q9Y6V7 483 aaKnown RBP6.74□□□□□ -1.33
USP15-201ENST00000280377 U3KPZ7 1027 aaPredicted RBP6.74□□□□□ -1.33
USP15-201ENST00000280377 MROH5Q6ZUA9 1318 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 ZNF532Q9HCE3 1301 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 APPP05067 770 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 PSMA5P28066 241 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 CLEC17AQ6ZS10 378 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 GAS2L3Q86XJ1 694 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 SMC3Q9UQE7 1217 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 E7EWF7 191 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 CEBPZQ03701 1054 aaKnown RBP6.74□□□□□ -1.33
USP15-201ENST00000280377 FAM173BQ6P4H8 233 aa6.74□□□□□ -1.33
USP15-201ENST00000280377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.73□□□□□ -1.33
USP15-201ENST00000280377 RFC4P35249 363 aa6.73□□□□□ -1.33
USP15-201ENST00000280377 RC3H1Q5TC82 1133 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms