RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 ZAP70P43403 619 aa23.46■■□□□ 1.35
C11orf49-201ENST00000278460 MCMDC2Q4G0Z9 681 aa23.46■■□□□ 1.35
C11orf49-201ENST00000278460 MAP4K1Q92918 833 aa23.46■■□□□ 1.35
C11orf49-201ENST00000278460 KCNB2Q92953 911 aa23.46■■□□□ 1.35
C11orf49-201ENST00000278460 ANKRD31Q8N7Z5 1873 aa23.45■■□□□ 1.35
C11orf49-201ENST00000278460 ZMYM1Q5SVZ6 1142 aa23.45■■□□□ 1.34
C11orf49-201ENST00000278460 MINPP1Q9UNW1 487 aa23.45■■□□□ 1.34
C11orf49-201ENST00000278460 RNF113AO15541 343 aaKnown RBP23.44■■□□□ 1.34
C11orf49-201ENST00000278460 ZFYP08048 801 aaPredicted RBP23.44■■□□□ 1.34
C11orf49-201ENST00000278460 ST5P78524 1137 aa23.44■■□□□ 1.34
C11orf49-201ENST00000278460 UBE4AQ14139 1066 aa23.44■■□□□ 1.34
C11orf49-201ENST00000278460 ZNF589Q86UQ0 364 aaPredicted RBP23.44■■□□□ 1.34
C11orf49-201ENST00000278460 SNX14Q9Y5W7 946 aa23.44■■□□□ 1.34
C11orf49-201ENST00000278460 NECTIN1Q15223 517 aa23.44■■□□□ 1.34
C11orf49-201ENST00000278460 TTF1Q15361 905 aaPredicted RBP23.44■■□□□ 1.34
C11orf49-201ENST00000278460 COL23A1Q86Y22 540 aaPredicted RBP23.44■■□□□ 1.34
C11orf49-201ENST00000278460 RBM8AQ9Y5S9 174 aaKnown RBP23.44■■□□□ 1.34
C11orf49-201ENST00000278460 DDR1Q08345 913 aa23.43■■□□□ 1.34
C11orf49-201ENST00000278460 SNAP23O00161 211 aa23.42■■□□□ 1.34
C11orf49-201ENST00000278460 POLRMTO00411 1230 aaKnown RBP23.42■■□□□ 1.34
C11orf49-201ENST00000278460 CHGBP05060 677 aa23.41■■□□□ 1.34
C11orf49-201ENST00000278460 NEK4P51957 841 aa23.41■■□□□ 1.34
C11orf49-201ENST00000278460 PI16Q6UXB8 463 aa23.41■■□□□ 1.34
C11orf49-201ENST00000278460 NLGN1Q8N2Q7 840 aa23.41■■□□□ 1.34
C11orf49-201ENST00000278460 ANKRD2Q9GZV1 360 aa23.41■■□□□ 1.34
C11orf49-201ENST00000278460 CYP2E1P05181 493 aaPredicted RBP23.41■■□□□ 1.34
C11orf49-201ENST00000278460 RASEFQ8IZ41 740 aa23.41■■□□□ 1.34
C11orf49-201ENST00000278460 SEC62Q99442 399 aaKnown RBP23.41■■□□□ 1.34
C11orf49-201ENST00000278460 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.41■■□□□ 1.34
C11orf49-201ENST00000278460 HMG20BQ9P0W2 317 aa23.41■■□□□ 1.34
C11orf49-201ENST00000278460 KCNJ4P48050 445 aa23.4■■□□□ 1.34
C11orf49-201ENST00000278460 MCM2P49736 904 aa23.4■■□□□ 1.34
C11orf49-201ENST00000278460 GRAPQ13588 217 aa23.4■■□□□ 1.34
C11orf49-201ENST00000278460 CRY2Q49AN0 593 aa23.4■■□□□ 1.34
C11orf49-201ENST00000278460 ZSCAN25Q6NSZ9 544 aa23.4■■□□□ 1.34
C11orf49-201ENST00000278460 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
C11orf49-201ENST00000278460 GRAPLQ8TC17 118 aaPredicted RBP23.4■■□□□ 1.34
C11orf49-201ENST00000278460 LAMA4Q16363 1823 aa23.39■■□□□ 1.33
C11orf49-201ENST00000278460 CREB3L3Q68CJ9 461 aa23.39■■□□□ 1.33
C11orf49-201ENST00000278460 SLKQ9H2G2 1235 aaPredicted RBP23.39■■□□□ 1.33
C11orf49-201ENST00000278460 ZNF804BA4D1E1 1349 aa23.38■■□□□ 1.33
C11orf49-201ENST00000278460 MAST3O60307 1309 aa23.38■■□□□ 1.33
C11orf49-201ENST00000278460 PNPLA7Q6ZV29 1317 aa23.38■■□□□ 1.33
C11orf49-201ENST00000278460 RASGRF1Q13972 1273 aa23.38■■□□□ 1.33
C11orf49-201ENST00000278460 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
C11orf49-201ENST00000278460 CCDC129Q6ZRS4 1044 aa23.38■■□□□ 1.33
C11orf49-201ENST00000278460 SPATA5Q8NB90 893 aa23.38■■□□□ 1.33
C11orf49-201ENST00000278460 TM6SF1Q9BZW5 370 aa23.38■■□□□ 1.33
C11orf49-201ENST00000278460 U3KPZ7 1027 aaPredicted RBP23.38■■□□□ 1.33
C11orf49-201ENST00000278460 ZKSCAN1P17029 563 aaPredicted RBP23.37■■□□□ 1.33
C11orf49-201ENST00000278460 BCAMP50895 628 aa23.37■■□□□ 1.33
C11orf49-201ENST00000278460 APPBP2Q92624 585 aa23.37■■□□□ 1.33
C11orf49-201ENST00000278460 CAMKK2Q96RR4 588 aa23.37■■□□□ 1.33
C11orf49-201ENST00000278460 LRRC37AA6NMS7 1700 aa23.37■■□□□ 1.33
C11orf49-201ENST00000278460 SLC27A2O14975 620 aa23.37■■□□□ 1.33
C11orf49-201ENST00000278460 RPGRQ92834 1020 aaKnown RBP23.37■■□□□ 1.33
C11orf49-201ENST00000278460 DSCC1Q9BVC3 393 aa23.37■■□□□ 1.33
C11orf49-201ENST00000278460 PIH1D3Q9NQM4 214 aaKnown RBP23.37■■□□□ 1.33
C11orf49-201ENST00000278460 ADD2P35612 726 aa23.36■■□□□ 1.33
C11orf49-201ENST00000278460 SLFNL1Q499Z3 407 aa23.36■■□□□ 1.33
C11orf49-201ENST00000278460 SPRYD3Q8NCJ5 442 aa23.36■■□□□ 1.33
C11orf49-201ENST00000278460 KLRG2A4D1S0 409 aaPredicted RBP23.35■■□□□ 1.33
C11orf49-201ENST00000278460 TSGA10IPQ3SY00 556 aa23.35■■□□□ 1.33
C11orf49-201ENST00000278460 OSBP2Q969R2 916 aa23.35■■□□□ 1.33
C11orf49-201ENST00000278460 GNL3LQ9NVN8 582 aaKnown RBP23.35■■□□□ 1.33
C11orf49-201ENST00000278460 M0R2C6 588 aa23.34■■□□□ 1.33
C11orf49-201ENST00000278460 UBE3CQ15386 1083 aa23.34■■□□□ 1.33
C11orf49-201ENST00000278460 EZH2Q15910 746 aaKnown RBP23.34■■□□□ 1.33
C11orf49-201ENST00000278460 CAVIN4Q5BKX8 364 aa23.34■■□□□ 1.33
C11orf49-201ENST00000278460 RBM17Q96I25 401 aaKnown RBP23.34■■□□□ 1.33
C11orf49-201ENST00000278460 UPF3BQ9BZI7 483 aaKnown RBP23.34■■□□□ 1.33
C11orf49-201ENST00000278460 CCDC88AQ3V6T2 1871 aa23.34■■□□□ 1.33
C11orf49-201ENST00000278460 HOXA10P31260 410 aaPredicted RBP23.33■■□□□ 1.33
C11orf49-201ENST00000278460 EN1Q05925 392 aaPredicted RBP23.33■■□□□ 1.33
C11orf49-201ENST00000278460 WASHC4Q2M389 1173 aa23.33■■□□□ 1.33
C11orf49-201ENST00000278460 RPAP1Q9BWH6 1393 aaPredicted RBP23.33■■□□□ 1.33
C11orf49-201ENST00000278460 ZBTB22O15209 634 aa23.33■■□□□ 1.32
C11orf49-201ENST00000278460 HSP90AA1P07900 732 aaKnown RBP23.33■■□□□ 1.32
C11orf49-201ENST00000278460 DDIT3P35638 169 aa23.33■■□□□ 1.32
C11orf49-201ENST00000278460 FAM84BQ96KN1 310 aaPredicted RBP23.33■■□□□ 1.32
C11orf49-201ENST00000278460 TTC14Q96N46 770 aa23.33■■□□□ 1.32
C11orf49-201ENST00000278460 ZSWIM6Q9HCJ5 1215 aa23.33■■□□□ 1.32
C11orf49-201ENST00000278460 COL11A2P13942 1736 aaPredicted RBP23.32■■□□□ 1.32
C11orf49-201ENST00000278460 IDH1O75874 414 aaKnown RBP23.32■■□□□ 1.32
C11orf49-201ENST00000278460 GYG1P46976 350 aa23.32■■□□□ 1.32
C11orf49-201ENST00000278460 SLC9C2Q5TAH2 1124 aa23.32■■□□□ 1.32
C11orf49-201ENST00000278460 FBXO33Q7Z6M2 555 aa23.32■■□□□ 1.32
C11orf49-201ENST00000278460 JAKMIP1Q96N16 626 aaKnown RBP23.32■■□□□ 1.32
C11orf49-201ENST00000278460 CRAMP1Q96RY5 1269 aa23.32■■□□□ 1.32
C11orf49-201ENST00000278460 ANP32EQ9BTT0 268 aa23.32■■□□□ 1.32
C11orf49-201ENST00000278460 CHMP5Q9NZZ3 219 aa23.32■■□□□ 1.32
C11orf49-201ENST00000278460 WTIPA6NIX2 430 aaPredicted RBP23.31■■□□□ 1.32
C11orf49-201ENST00000278460 SEMA3EO15041 775 aa23.31■■□□□ 1.32
C11orf49-201ENST00000278460 HSPD1P10809 573 aaKnown RBP23.31■■□□□ 1.32
C11orf49-201ENST00000278460 CASTP20810 708 aaKnown RBP23.31■■□□□ 1.32
C11orf49-201ENST00000278460 PSMA5P28066 241 aa23.31■■□□□ 1.32
C11orf49-201ENST00000278460 MAP3K12Q12852 859 aa23.31■■□□□ 1.32
C11orf49-201ENST00000278460 SLC15A2Q16348 729 aa23.31■■□□□ 1.32
C11orf49-201ENST00000278460 ADCK5Q3MIX3 580 aa23.31■■□□□ 1.32
C11orf49-201ENST00000278460 BRIP1Q9BX63 1249 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms