RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 SYMPKQ92797 1274 aaKnown RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 NUTM2BA6NNL0 878 aaPredicted RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 NUTM2EB1AL46 878 aaPredicted RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 ATMINO43313 823 aaPredicted RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 ATN1P54259 1190 aaPredicted RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 SQSTM1Q13501 440 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 NUTM2DQ5VT03 806 aaPredicted RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 NUTM2AQ8IVF1 878 aaPredicted RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 GLYCTKQ8IVS8 523 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 TATDN2Q93075 761 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 SEC16BQ96JE7 1060 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 SPOCK3Q9BQ16 436 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 UBR2Q8IWV8 1755 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 K7ELQ4 463 aaPredicted RBP3.69□□□□□ -1.82
HERC4-201ENST00000277817 LDHBP07195 334 aaKnown RBP3.69□□□□□ -1.82
HERC4-201ENST00000277817 GNA15P30679 374 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 FILIP1Q7Z7B0 1213 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 MTA3Q9BTC8 594 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 PIK3C2GO75747 1445 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 RAB3GAP2Q9H2M9 1393 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 FAM221BA6H8Z2 402 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 FAM83GA6ND36 823 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 FOXO3O43524 673 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 HSPA5P11021 654 aaKnown RBP3.69□□□□□ -1.82
HERC4-201ENST00000277817 GARTP22102 1010 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 SEC13P55735 322 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 MTMR3Q13615 1198 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 RAB33AQ14088 237 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 USP48Q86UV5 1035 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.69□□□□□ -1.82
HERC4-201ENST00000277817 DCAF11Q8TEB1 546 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 ESF1Q9H501 851 aaKnown RBP3.69□□□□□ -1.82
HERC4-201ENST00000277817 ANO2Q9NQ90 1003 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 SNTG2Q9NY99 539 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 BIN2Q9UBW5 565 aaPredicted RBP3.69□□□□□ -1.82
HERC4-201ENST00000277817 PGAP2Q9UHJ9 254 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 DDX11L8A8MPP1 907 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 FAM13AO94988 1023 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 FMNL1O95466 1100 aaPredicted RBP3.69□□□□□ -1.82
HERC4-201ENST00000277817 ANAPC15P60006 121 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 PDXDC2PQ6P474 469 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 NUDT18Q6ZVK8 323 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 SAMD3Q8N6K7 520 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 ANP32EQ9BTT0 268 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 CCSER2Q9H7U1 834 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 ZRANB1Q9UGI0 708 aa3.69□□□□□ -1.82
HERC4-201ENST00000277817 C10orf71Q711Q0 1435 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 TRIM6-TRIM34B2RNG4 842 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 FOXD4Q12950 439 aaPredicted RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 RETREG3Q86VR2 466 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 PRIMPOLQ96LW4 560 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 JADE2Q9NQC1 790 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 TNRC6CQ9HCJ0 1690 aaKnown RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 THNSL2Q86YJ6 484 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 CCDC146Q8IYE0 955 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 GPKOWQ92917 476 aaPredicted RBP eCLIP3.68□□□□□ -1.82
HERC4-201ENST00000277817 ZNF408Q9H9D4 720 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 UPF2Q9HAU5 1272 aaKnown RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 BCL2L12Q9HB09 334 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 PPP4R2Q9NY27 417 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 COL5A2P05997 1499 aaPredicted RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 HSP90AA1P07900 732 aaKnown RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 CD44P16070 742 aaKnown RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 ERFEQ4G0M1 354 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 CC2D1BQ5T0F9 858 aaKnown RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 TSC1Q92574 1164 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 MYO19Q96H55 970 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 CAMKK2Q96RR4 588 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 RPS6KC1Q96S38 1066 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 COLQQ9Y215 455 aaPredicted RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 KNSTRNQ9Y448 316 aa3.68□□□□□ -1.82
HERC4-201ENST00000277817 DICER1Q9UPY3 1922 aaKnown RBP3.68□□□□□ -1.82
HERC4-201ENST00000277817 CCER2I3L3R5 266 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 CAPNS1P04632 268 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 DALRD3Q5D0E6 543 aaKnown RBP3.67□□□□□ -1.82
HERC4-201ENST00000277817 ANKRD13DQ6ZTN6 518 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 TRIM50Q86XT4 487 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 PGBD3Q8N328 593 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 TRPM4Q8TD43 1214 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 TMEM238LA0A1B0GVL6 79 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 SFI1A8K8P3 1242 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 EYA4O95677 639 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 EML3Q32P44 896 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 RNF187Q5TA31 235 aaPredicted RBP3.67□□□□□ -1.82
HERC4-201ENST00000277817 MPHOSPH9Q99550 1183 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 ARNT2Q9HBZ2 717 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 CCDC87Q9NVE4 849 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 NFAT5O94916 1531 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 JCADQ9P266 1359 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 TMEM229AB2RXF0 380 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 SRGNP10124 158 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 CTHP32929 405 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 NOS2P35228 1153 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 MORN1Q5T089 497 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 SERINC2Q96SA4 455 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 SAP130Q9H0E3 1048 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 PPP1R1BQ9UD71 204 aaPredicted RBP3.67□□□□□ -1.82
HERC4-201ENST00000277817 EID1Q9Y6B2 187 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 SSH2Q76I76 1423 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 PRC1O43663 620 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms